FFCP PHASE1:Hg19::chr12:76334611..76334639,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:76334611..76334639,+|id=chr12:76334611..76334639,+|ontology_enrichment_celltype=CL:1000507!2.40e-16!12;CL:1000494!2.40e-16!12;CL:1000449!5.18e-15!16;CL:1000497!3.71e-13!18;CL:0002518!3.71e-13!18;CL:0000066!5.81e-10!254;CL:0002681!2.35e-08!13;CL:0002584!2.35e-08!13;CL:0002593!8.43e-08!2|ontology_enrichment_celltype_v019=CL:0002076;4.71e-08;42!CL:0002593;1.93e-07;2|ontology_enrichment_celltype_v019_2=CL:0002076,2.25e-10,42;CL:0000223,5.33e-10,58;CL:0002593,2.25e-07,2;CL:0000076,7.34e-07,63|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:1749;1.48e-22;14!DOID:4074;9.86e-08;2!DOID:4905;9.86e-08;2!DOID:3498;9.86e-08;2!DOID:3910;1.05e-07;2!DOID:1909;1.45e-07;2|ontology_enrichment_disease_v019_2=DOID:1749,1.48e-22,14;DOID:305,1.25e-10,106;DOID:0050687,3.12e-09,143;DOID:4074,9.87e-08,2;DOID:4905,9.87e-08,2;DOID:3498,9.87e-08,2;DOID:3910,1.05e-07,2;DOID:1909,1.45e-07,2|ontology_enrichment_uberon=UBERON:0009773!2.40e-16!12;UBERON:0001231!2.40e-16!12;UBERON:0004810!2.40e-16!12;UBERON:0004211!5.18e-15!16;UBERON:0001285!5.18e-15!16;UBERON:0007684!5.18e-15!16;UBERON:0003220!5.18e-15!16;UBERON:0004208!5.18e-15!16;UBERON:0006555!4.97e-14!17;UBERON:0005103!4.97e-14!17;UBERON:0000083!4.97e-14!17;UBERON:0009201!4.97e-14!17;UBERON:0004819!4.97e-14!17;UBERON:0006553!4.97e-14!17;UBERON:0003074!4.97e-14!17;UBERON:0003060!4.97e-14!17;UBERON:0000080!3.71e-13!18;UBERON:0002120!3.71e-13!18;UBERON:0004875!3.71e-13!18;UBERON:0005721!3.71e-13!18;UBERON:0005754!3.71e-13!18;UBERON:0007297!3.71e-13!18;UBERON:0000058!4.75e-13!26;UBERON:0004876!1.12e-11!20;UBERON:0003887!4.85e-11!21;UBERON:0003914!4.20e-09!118;UBERON:0003064!1.52e-08!37;UBERON:0001225!2.35e-08!13;UBERON:0008987!2.35e-08!13;UBERON:0002113!3.16e-08!27;UBERON:0003918!3.16e-08!27;UBERON:0005095!3.16e-08!27;UBERON:0007687!3.16e-08!27;UBERON:0002456!8.43e-08!2;UBERON:0006554!7.67e-07!44|ontology_enrichment_uberon_v019=UBERON:0000997;5.15e-14;1!UBERON:0005056;5.15e-14;1!UBERON:0004176;5.15e-14;1!UBERON:0003343;1.26e-13;4!UBERON:0004785;1.26e-13;4!UBERON:0000974;2.16e-09;6!UBERON:0004903;1.05e-07;2!UBERON:0002173;1.05e-07;2!UBERON:0002186;1.05e-07;2!UBERON:0006562;1.93e-07;2!UBERON:0002456;1.93e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0000997,5.15e-14,1;UBERON:0005056,5.15e-14,1;UBERON:0003343,1.26e-13,4;UBERON:0004785,1.26e-13,4;UBERON:0004903,1.05e-07,2;UBERON:0002173,1.05e-07,2;UBERON:0002186,1.05e-07,2;UBERON:0002456,2.25e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0.529636723252875,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.878002283269004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0,0,0,1.20303882181971,0,0,0,0,0.451199612907412,0.15403067420883,0.784349769176855,1.46139224653261,0.105551628892876,0,0.170093705276516,0.215915916102139,0,0,0,0.254876273045038,0,0.447749509444357,0,0,0,0.328014645699706,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0,0,0,0.6970372701606,0,0.532306030317022,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,1.58510321173008,0,0,0.243713489631284,1.05650146756755,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,33.6828606925079,17.0349945696153,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.8710835097149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.54541460090708,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0.528001682597033,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0.226624183040251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.70112264379108,0,0.235265819698172,0,0,0,0,0.554805861502613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.761610424337591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25362188757041,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:76334611..76334639,+ | |||
|id=chr12:76334611..76334639,+ | |||
|ontology_enrichment_celltype=CL:1000507!2.40e-16!12;CL:1000494!2.40e-16!12;CL:1000449!5.18e-15!16;CL:1000497!3.71e-13!18;CL:0002518!3.71e-13!18;CL:0000066!5.81e-10!254;CL:0002681!2.35e-08!13;CL:0002584!2.35e-08!13;CL:0002593!8.43e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0002076;4.71e-08;42!CL:0002593;1.93e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,2.25e-10,42;CL:0000223,5.33e-10,58;CL:0002593,2.25e-07,2;CL:0000076,7.34e-07,63 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1749;1.48e-22;14!DOID:4074;9.86e-08;2!DOID:4905;9.86e-08;2!DOID:3498;9.86e-08;2!DOID:3910;1.05e-07;2!DOID:1909;1.45e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.48e-22,14;DOID:305,1.25e-10,106;DOID:0050687,3.12e-09,143;DOID:4074,9.87e-08,2;DOID:4905,9.87e-08,2;DOID:3498,9.87e-08,2;DOID:3910,1.05e-07,2;DOID:1909,1.45e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0009773!2.40e-16!12;UBERON:0001231!2.40e-16!12;UBERON:0004810!2.40e-16!12;UBERON:0004211!5.18e-15!16;UBERON:0001285!5.18e-15!16;UBERON:0007684!5.18e-15!16;UBERON:0003220!5.18e-15!16;UBERON:0004208!5.18e-15!16;UBERON:0006555!4.97e-14!17;UBERON:0005103!4.97e-14!17;UBERON:0000083!4.97e-14!17;UBERON:0009201!4.97e-14!17;UBERON:0004819!4.97e-14!17;UBERON:0006553!4.97e-14!17;UBERON:0003074!4.97e-14!17;UBERON:0003060!4.97e-14!17;UBERON:0000080!3.71e-13!18;UBERON:0002120!3.71e-13!18;UBERON:0004875!3.71e-13!18;UBERON:0005721!3.71e-13!18;UBERON:0005754!3.71e-13!18;UBERON:0007297!3.71e-13!18;UBERON:0000058!4.75e-13!26;UBERON:0004876!1.12e-11!20;UBERON:0003887!4.85e-11!21;UBERON:0003914!4.20e-09!118;UBERON:0003064!1.52e-08!37;UBERON:0001225!2.35e-08!13;UBERON:0008987!2.35e-08!13;UBERON:0002113!3.16e-08!27;UBERON:0003918!3.16e-08!27;UBERON:0005095!3.16e-08!27;UBERON:0007687!3.16e-08!27;UBERON:0002456!8.43e-08!2;UBERON:0006554!7.67e-07!44 | |||
|ontology_enrichment_uberon_v019=UBERON:0000997;5.15e-14;1!UBERON:0005056;5.15e-14;1!UBERON:0004176;5.15e-14;1!UBERON:0003343;1.26e-13;4!UBERON:0004785;1.26e-13;4!UBERON:0000974;2.16e-09;6!UBERON:0004903;1.05e-07;2!UBERON:0002173;1.05e-07;2!UBERON:0002186;1.05e-07;2!UBERON:0006562;1.93e-07;2!UBERON:0002456;1.93e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000997,5.15e-14,1;UBERON:0005056,5.15e-14,1;UBERON:0003343,1.26e-13,4;UBERON:0004785,1.26e-13,4;UBERON:0004903,1.05e-07,2;UBERON:0002173,1.05e-07,2;UBERON:0002186,1.05e-07,2;UBERON:0002456,2.25e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0.529636723252875,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.878002283269004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0,0,0,1.20303882181971,0,0,0,0,0.451199612907412,0.15403067420883,0.784349769176855,1.46139224653261,0.105551628892876,0,0.170093705276516,0.215915916102139,0,0,0,0.254876273045038,0,0.447749509444357,0,0,0,0.328014645699706,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0,0,0,0.6970372701606,0,0.532306030317022,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,1.58510321173008,0,0,0.243713489631284,1.05650146756755,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,33.6828606925079,17.0349945696153,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.8710835097149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.54541460090708,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0.528001682597033,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0.226624183040251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.70112264379108,0,0.235265819698172,0,0,0,0,0.554805861502613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.761610424337591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25362188757041,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.96021367751668,10.0885729186923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14986184875636,0,0,0,0,0,0,0,0,0,0.354581522651905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91107787795487,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.35661815816973,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0.713921808193872,0,0,1.0028301571695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p@chr12:76334611..76334639,+ | |||
}} |
Revision as of 00:27, 11 September 2013
Short description: | p@chr12:76334611..76334639, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:76334611..76334639, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 2.25e-10 | 42 |
endodermal cell | 5.33e-10 | 58 |
smooth muscle cell of the internal thoracic artery | 2.25e-07 | 2 |
squamous epithelial cell | 7.34e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
mammalian vulva | 5.15e-14 | 1 |
external female genitalia | 5.15e-14 | 1 |
mucosa of oral region | 1.26e-13 | 4 |
respiratory system mucosa | 1.26e-13 | 4 |
bronchoalveolar duct junction | 1.05e-07 | 2 |
alveolar duct | 1.05e-07 | 2 |
bronchiole | 1.05e-07 | 2 |
internal thoracic artery | 2.25e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.48e-22 | 14 |
carcinoma | 1.25e-10 | 106 |
cell type cancer | 3.12e-09 | 143 |
pancreas adenocarcinoma | 9.87e-08 | 2 |
pancreatic carcinoma | 9.87e-08 | 2 |
pancreatic ductal adenocarcinoma | 9.87e-08 | 2 |
lung adenocarcinoma | 1.05e-07 | 2 |
melanoma | 1.45e-07 | 2 |
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