FFCP PHASE1:Hg19::chr12:71551821..71551832,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7103|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11855|TSSclassifier=S|UniProt=P19075|association_with_transcript=-42bp_to_ENST00000550818,NM_004616,uc001swj.1_5end|coexpression_cluster_id=C63|description=CAGE_peak_9_at_TSPAN8_5end|id=chr12:71551821..71551832,-|ontology_enrichment_celltype=CL:1000306!1.92e-07!4;CL:0002547!1.92e-07!4;CL:0002150!6.92e-07!3;CL:0000861!6.92e-07!3|ontology_enrichment_celltype_v019=CL:0002595;5.75e-16;5!CL:0002553;6.04e-10;1!CL:0000167;8.17e-10;1!CL:0000164;8.17e-10;1!CL:0000502;8.17e-10;1!CL:0000172;8.17e-10;1!CL:0000173;8.17e-10;1|ontology_enrichment_celltype_v019_2=CL:0002595,5.76e-16,5;CL:0002553,5.79e-10,1;CL:0000167,8.17e-10,1;CL:0000164,8.17e-10,1;CL:0000502,8.17e-10,1;CL:0000172,8.17e-10,1;CL:0000173,8.17e-10,1;CL:0002351,8.17e-10,1|ontology_enrichment_development_v019=UBERON:0006241;3.01e-12;3!UBERON:0003057;3.01e-12;3!CL:0002351;8.17e-10;1!UBERON:0008801;1.68e-09;1!UBERON:0006242;1.68e-09;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:4430;8.17e-10;1|ontology_enrichment_disease_v019_2=DOID:4430,8.17e-10,1|ontology_enrichment_uberon=UBERON:0007023!6.39e-19!115;UBERON:0000025!1.95e-10!194;UBERON:0002298!2.54e-10!8;UBERON:0004111!3.32e-10!241;UBERON:0000477!1.29e-08!286;UBERON:0004573!6.89e-08!33;UBERON:0004571!6.89e-08!33;UBERON:0000481!9.31e-08!347;UBERON:0000415!1.92e-07!4;UBERON:0007240!1.92e-07!4;UBERON:0005742!1.92e-07!4;UBERON:0005734!1.92e-07!4;UBERON:0004664!1.92e-07!4;UBERON:0004663!1.92e-07!4;UBERON:0004921!2.24e-07!129;UBERON:0004185!2.24e-07!129;UBERON:0001049!2.44e-07!57;UBERON:0005068!2.44e-07!57;UBERON:0006241!2.44e-07!57;UBERON:0007135!2.44e-07!57;UBERON:0001007!8.41e-07!155;UBERON:0001555!8.41e-07!155;UBERON:0007026!8.41e-07!155|ontology_enrichment_uberon_v019=UBERON:0003834;5.75e-16;5!UBERON:0001533;5.75e-16;5!UBERON:0002240;3.01e-12;3!UBERON:0005174;3.01e-12;3!UBERON:0001137;3.01e-12;3!UBERON:0003513;1.46e-11;7!UBERON:0001831;1.68e-09;1!UBERON:0001567;1.68e-09;1|ontology_enrichment_uberon_v019_2=UBERON:0003834,5.76e-16,5;UBERON:0001533,5.76e-16,5;UBERON:0002240,3.01e-12,3;UBERON:0005174,3.01e-12,3;UBERON:0001137,3.01e-12,3;UBERON:0003513,1.46e-11,7;UBERON:0001831,2.67e-09,1;UBERON:0001567,2.67e-09,1;UBERON:0008801,2.67e-09,1|phase1_expression=0,0,0.281908808191942,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,0.132409180813219,0.860509862246441,0.709336764396714,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.794025282120147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0.217879444092406,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0.846016147141356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824328093181778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.616067160352178,0,0,0.18532421910392,1.43124886741991,0,0,0,0,0,0,0.78494864019923,0,0,0,0.404364963146632,3.17020642346017,0,0,2.43713489631284,0,0,0,0,0,6.6343897524122,2.63070531152258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0.146508179271894,0.121360521749513,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0,0,0,0,0,0.269605053441981,0,0,0.0986434056369336,0,0,0.969332746095218,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.0884575645033392,1.83309043480088,0,0,0,0.134802265961354,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54810130062536,1.31560770755134,1.23173185579814,0,0,0,0,0,0,0.195551382734803,0,1.92107695265417,0,1.15272333723285,0,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0.429765441419957,0,0.279282401272254,0.229160424011684,0,0,0,0,0,0,0,0,0.0824158583811665,0.0674035438541849,0.78741985211799,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0.104909176269996,0,0.717149357331379,0,0,0,0,0,1.72844298240254,0,0,0,0,0,0.146552233678082,0,0.387848869084652,0.52893040697076,0.342173675768659,0,0.533937062838473,0,0,0,0,0,0,0,0,0.612691153526923,0,0,0,0,0,0.573409195690071,0.443716206147409,0.558867626472451,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0.159296767163702,0,0.155262956876259,0,0,0,0.150257608997218,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0.857766365499703,0,0.226705925512272,0.231522474323834,0,0,0,0.43856809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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7103 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11855 | |||
|TSSclassifier=S | |||
|UniProt=P19075 | |||
|association_with_transcript=-42bp_to_ENST00000550818,NM_004616,uc001swj.1_5end | |||
|coexpression_cluster_id=C63 | |||
|description=CAGE_peak_9_at_TSPAN8_5end | |||
|id=chr12:71551821..71551832,- | |||
|ontology_enrichment_celltype=CL:1000306!1.92e-07!4;CL:0002547!1.92e-07!4;CL:0002150!6.92e-07!3;CL:0000861!6.92e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002595;5.75e-16;5!CL:0002553;6.04e-10;1!CL:0000167;8.17e-10;1!CL:0000164;8.17e-10;1!CL:0000502;8.17e-10;1!CL:0000172;8.17e-10;1!CL:0000173;8.17e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002595,5.76e-16,5;CL:0002553,5.79e-10,1;CL:0000167,8.17e-10,1;CL:0000164,8.17e-10,1;CL:0000502,8.17e-10,1;CL:0000172,8.17e-10,1;CL:0000173,8.17e-10,1;CL:0002351,8.17e-10,1 | |||
|ontology_enrichment_development_v019=UBERON:0006241;3.01e-12;3!UBERON:0003057;3.01e-12;3!CL:0002351;8.17e-10;1!UBERON:0008801;1.68e-09;1!UBERON:0006242;1.68e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4430;8.17e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,8.17e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.39e-19!115;UBERON:0000025!1.95e-10!194;UBERON:0002298!2.54e-10!8;UBERON:0004111!3.32e-10!241;UBERON:0000477!1.29e-08!286;UBERON:0004573!6.89e-08!33;UBERON:0004571!6.89e-08!33;UBERON:0000481!9.31e-08!347;UBERON:0000415!1.92e-07!4;UBERON:0007240!1.92e-07!4;UBERON:0005742!1.92e-07!4;UBERON:0005734!1.92e-07!4;UBERON:0004664!1.92e-07!4;UBERON:0004663!1.92e-07!4;UBERON:0004921!2.24e-07!129;UBERON:0004185!2.24e-07!129;UBERON:0001049!2.44e-07!57;UBERON:0005068!2.44e-07!57;UBERON:0006241!2.44e-07!57;UBERON:0007135!2.44e-07!57;UBERON:0001007!8.41e-07!155;UBERON:0001555!8.41e-07!155;UBERON:0007026!8.41e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0003834;5.75e-16;5!UBERON:0001533;5.75e-16;5!UBERON:0002240;3.01e-12;3!UBERON:0005174;3.01e-12;3!UBERON:0001137;3.01e-12;3!UBERON:0003513;1.46e-11;7!UBERON:0001831;1.68e-09;1!UBERON:0001567;1.68e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003834,5.76e-16,5;UBERON:0001533,5.76e-16,5;UBERON:0002240,3.01e-12,3;UBERON:0005174,3.01e-12,3;UBERON:0001137,3.01e-12,3;UBERON:0003513,1.46e-11,7;UBERON:0001831,2.67e-09,1;UBERON:0001567,2.67e-09,1;UBERON:0008801,2.67e-09,1 | |||
|phase1_expression=0,0,0.281908808191942,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,0.132409180813219,0.860509862246441,0.709336764396714,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.794025282120147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0.217879444092406,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0.846016147141356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824328093181778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.616067160352178,0,0,0.18532421910392,1.43124886741991,0,0,0,0,0,0,0.78494864019923,0,0,0,0.404364963146632,3.17020642346017,0,0,2.43713489631284,0,0,0,0,0,6.6343897524122,2.63070531152258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0.146508179271894,0.121360521749513,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0,0,0,0,0,0.269605053441981,0,0,0.0986434056369336,0,0,0.969332746095218,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.0884575645033392,1.83309043480088,0,0,0,0.134802265961354,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54810130062536,1.31560770755134,1.23173185579814,0,0,0,0,0,0,0.195551382734803,0,1.92107695265417,0,1.15272333723285,0,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0.429765441419957,0,0.279282401272254,0.229160424011684,0,0,0,0,0,0,0,0,0.0824158583811665,0.0674035438541849,0.78741985211799,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0.104909176269996,0,0.717149357331379,0,0,0,0,0,1.72844298240254,0,0,0,0,0,0.146552233678082,0,0.387848869084652,0.52893040697076,0.342173675768659,0,0.533937062838473,0,0,0,0,0,0,0,0,0.612691153526923,0,0,0,0,0,0.573409195690071,0.443716206147409,0.558867626472451,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0.159296767163702,0,0.155262956876259,0,0,0,0.150257608997218,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0.857766365499703,0,0.226705925512272,0.231522474323834,0,0,0,0.438568099157414,0.176689145945881,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,26.7701250799445,0,0,0,3.20228299314188,0,0,0.192687675289379,0,0.319267718114302,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0.147856086217045,0.0675375846183947,0,0,0.19024743058172,0,1.09651553371436,0,0,0.127762427639595,0,0,0,0,0,0,0,0.135939465953663,0.131545547125698,0,0,0.156986185701028,0,5.0448989396482,0,0,0,0,0,0,0,0,0,0,0,0.860454717640555,0,0,0,0,0,0,0,0.588901401691458,10.1191877735284,0,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,1.31135736302374,1.41095188908457,0.245148321753905,2.59244201811789,2.1593931382644,2.97046400327086,0,0,0,0,0,0,0,0,0,0.917458566809082,0.860037498908708,0,0.0679914901909147,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.413731983447581,0.426467963801962,0,0,0,0,0.12729431655633,0.202117188958219,0,0.342233301085281,0.134704106029175,1.29099969706817,0.332660356546013,0,0,0,5.20986172218204,0,0,0,0,0,0 | |||
|short_description=p9@TSPAN8 | |||
}} |
Revision as of 00:20, 11 September 2013
Short description: | p9@TSPAN8 |
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Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_TSPAN8_5end |
Coexpression cluster: | C63_neuroectodermal_neuroblastoma_carcinoid_peripheral_chronic_neuroepithelioma_acute |
Association with transcript: | -42bp_to_ENST00000550818, NM_004616, uc001swj.1_5end |
EntrezGene: | TSPAN8 |
HGNC: | 11855 |
UniProt: | P19075 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the subclavian artery | 5.76e-16 | 5 |
lung fibroblast | 5.79e-10 | 1 |
peptide hormone secreting cell | 8.17e-10 | 1 |
enteroendocrine cell | 8.17e-10 | 1 |
type D enteroendocrine cell | 8.17e-10 | 1 |
somatostatin secreting cell | 8.17e-10 | 1 |
pancreatic D cell | 8.17e-10 | 1 |
progenitor cell of endocrine pancreas | 8.17e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
thoracic segment blood vessel | 5.76e-16 | 5 |
subclavian artery | 5.76e-16 | 5 |
spinal cord | 3.01e-12 | 3 |
dorsal region element | 3.01e-12 | 3 |
dorsum | 3.01e-12 | 3 |
trunk blood vessel | 1.46e-11 | 7 |
parotid gland | 2.67e-09 | 1 |
cheek | 2.67e-09 | 1 |
parotid gland primordium | 2.67e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 8.17e-10 | 1 |
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