FFCP PHASE1:Hg19::chr12:69747672..69747700,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=N|UniProt=|association_with_transcript=-236bp_to_ENST00000548626_5end|coexpression_cluster_id=C625|description=CAGE_peak_2_at_ENST00000548626_5end|id=chr12:69747672..69747700,-|ontology_enrichment_celltype=CL:0002194!7.75e-80!63;CL:0000576!7.75e-80!63;CL:0000040!7.75e-80!63;CL:0000559!7.75e-80!63;CL:0002009!6.83e-77!65;CL:0000766!4.49e-72!76;CL:0000839!2.94e-70!70;CL:0000557!4.83e-69!71;CL:0002057!5.76e-69!42;CL:0000860!1.81e-63!45;CL:0000763!2.69e-54!112;CL:0000049!2.69e-54!112;CL:0002087!3.10e-46!119;CL:0000738!1.25e-41!140;CL:0000037!1.67e-39!172;CL:0000566!1.67e-39!172;CL:0002031!2.08e-38!124;CL:0000988!3.08e-36!182;CL:0002032!5.44e-36!165;CL:0000837!5.44e-36!165;CL:0002393!3.83e-17!9;CL:0002397!3.83e-17!9;CL:0000134!2.53e-11!358;CL:0002320!9.42e-11!365;CL:0000219!9.01e-09!390;CL:0000767!5.08e-07!3;CL:0000235!6.34e-07!10|ontology_enrichment_celltype_v019=CL:0000473;1.70e-55;39!CL:0000234;1.70e-55;39!CL:0000576;2.13e-54;48!CL:0000860;2.56e-54;33!CL:0002057;2.56e-54;33!CL:0000766;8.80e-34;69!CL:0002393;1.85e-18;6!CL:0002397;1.85e-18;6!CL:0000763;5.77e-18;100!CL:0000235;5.76e-13;6!CL:0002087;1.19e-12;104!CL:0000738;3.42e-11;136!CL:0000767;1.10e-09;3!CL:0000226;1.96e-09;3!CL:0000842;1.96e-09;3!CL:0002619;3.38e-09;3!CL:0000988;3.36e-07;177|ontology_enrichment_celltype_v019_2=CL:0000473,1.80e-89,48;CL:0000234,1.80e-89,48;CL:0002194,2.34e-89,59;CL:0000576,2.34e-89,59;CL:0000040,2.34e-89,59;CL:0000559,2.34e-89,59;CL:0002009,4.21e-86,61;CL:0000766,1.40e-82,72;CL:0000839,8.17e-79,66;CL:0000557,1.74e-77,67;CL:0000860,2.73e-77,42;CL:0002057,2.73e-77,42;CL:0000763,2.50e-51,108;CL:0000049,2.50e-51,108;CL:0002087,2.67e-47,115;CL:0000738,2.18e-44,136;CL:0002031,1.65e-38,120;CL:0000037,2.91e-35,168;CL:0000988,7.61e-33,177;CL:0002032,1.27e-30,161;CL:0000837,1.27e-30,161;CL:0002393,2.58e-16,9;CL:0002397,2.58e-16,9;CL:0000235,4.67e-13,6;CL:0000134,2.43e-10,354;CL:0000767,6.49e-10,3;CL:0002320,6.55e-10,361;CL:0000226,2.09e-09,3;CL:0000842,2.09e-09,3;CL:0002619,4.59e-09,3;CL:0000219,2.09e-08,386|ontology_enrichment_development_v019=CL:0002057;3.61e-54;42!CL:0000049;2.03e-13;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!3.14e-71!102;UBERON:0003061!3.14e-71!102;UBERON:0002193!3.79e-63!112;UBERON:0002371!5.44e-62!80;UBERON:0001474!1.62e-56!86;UBERON:0002405!3.34e-46!115;UBERON:0004765!1.12e-45!101;UBERON:0001434!1.12e-45!101;UBERON:0003081!1.41e-26!216;UBERON:0002204!3.18e-22!167;UBERON:0000178!4.14e-11!15;UBERON:0000179!4.14e-11!15;UBERON:0000463!4.14e-11!15;UBERON:0002384!5.16e-11!375;UBERON:0000926!2.67e-08!448;UBERON:0004120!2.67e-08!448;UBERON:0006603!2.67e-08!448|ontology_enrichment_uberon_v019=UBERON:0000178;2.40e-11;15!UBERON:0000179;2.40e-11;15!UBERON:0000463;2.40e-11;15!UBERON:0003127;1.98e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.09e-75,98;UBERON:0003061,6.09e-75,98;UBERON:0002371,2.43e-70,76;UBERON:0002193,6.92e-67,108;UBERON:0001474,2.08e-64,82;UBERON:0004765,1.02e-57,90;UBERON:0002405,1.67e-55,93;UBERON:0001434,7.57e-51,100;UBERON:0003081,3.15e-31,203;UBERON:0002204,5.89e-26,167;UBERON:0000926,1.35e-15,315;UBERON:0004120,1.35e-15,315;UBERON:0006603,1.35e-15,315;UBERON:0000178,3.23e-11,15;UBERON:0000179,3.23e-11,15;UBERON:0000463,3.23e-11,15;UBERON:0002384,2.51e-09,371;UBERON:0003127,1.99e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96682138424452,2.68680578668049,4.64448369948228,0,0,0,0,0,1.46800219667424,3.32397245119126,1.40381113229099,4.12320654360118,1.34349284543955,2.26725566213286,1.28787783817093,1.89017710413434,0.755751887377619,1.4555043671269,1.62700325833979,0.822335776043652,5.26500830521676,5.17846306179871,1.0246428261164,10.6417003449863,2.41321976515633,0,1.35426486594342,3.20011977222428,2.18324920046277,3.59557575112135,4.59125838556354,1.60464513538047,0.639337125799041,5.60747210317417,0.997318288108159,2.98357325372886,6.09439401120026,0,1.24564449799115,6.28121663141858,3.65038042894141,6.5156653411535,5.44859552370032,1.84138817993782,6.32924774881769,14.576614755524,1.91343869968539,15.0954224766031,27.2958573685983,7.35866774923381,2.73233497385036,0.570025487482497,0.39783335439818,3.10529061399878,0,0,0,0.426730222566507,0,0,0,0,0,0.587237189370939,0,0,0.560508562981536,3.423993102076,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,2.27183175558278,1.91542711029194,0.930705723632056,0.953962497221368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.44703808522356,1.63802985597466,3.41851673264075,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-236bp_to_ENST00000548626_5end | |||
|coexpression_cluster_id=C625 | |||
|description=CAGE_peak_2_at_ENST00000548626_5end | |||
|id=chr12:69747672..69747700,- | |||
|ontology_enrichment_celltype=CL:0002194!7.75e-80!63;CL:0000576!7.75e-80!63;CL:0000040!7.75e-80!63;CL:0000559!7.75e-80!63;CL:0002009!6.83e-77!65;CL:0000766!4.49e-72!76;CL:0000839!2.94e-70!70;CL:0000557!4.83e-69!71;CL:0002057!5.76e-69!42;CL:0000860!1.81e-63!45;CL:0000763!2.69e-54!112;CL:0000049!2.69e-54!112;CL:0002087!3.10e-46!119;CL:0000738!1.25e-41!140;CL:0000037!1.67e-39!172;CL:0000566!1.67e-39!172;CL:0002031!2.08e-38!124;CL:0000988!3.08e-36!182;CL:0002032!5.44e-36!165;CL:0000837!5.44e-36!165;CL:0002393!3.83e-17!9;CL:0002397!3.83e-17!9;CL:0000134!2.53e-11!358;CL:0002320!9.42e-11!365;CL:0000219!9.01e-09!390;CL:0000767!5.08e-07!3;CL:0000235!6.34e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.70e-55;39!CL:0000234;1.70e-55;39!CL:0000576;2.13e-54;48!CL:0000860;2.56e-54;33!CL:0002057;2.56e-54;33!CL:0000766;8.80e-34;69!CL:0002393;1.85e-18;6!CL:0002397;1.85e-18;6!CL:0000763;5.77e-18;100!CL:0000235;5.76e-13;6!CL:0002087;1.19e-12;104!CL:0000738;3.42e-11;136!CL:0000767;1.10e-09;3!CL:0000226;1.96e-09;3!CL:0000842;1.96e-09;3!CL:0002619;3.38e-09;3!CL:0000988;3.36e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.80e-89,48;CL:0000234,1.80e-89,48;CL:0002194,2.34e-89,59;CL:0000576,2.34e-89,59;CL:0000040,2.34e-89,59;CL:0000559,2.34e-89,59;CL:0002009,4.21e-86,61;CL:0000766,1.40e-82,72;CL:0000839,8.17e-79,66;CL:0000557,1.74e-77,67;CL:0000860,2.73e-77,42;CL:0002057,2.73e-77,42;CL:0000763,2.50e-51,108;CL:0000049,2.50e-51,108;CL:0002087,2.67e-47,115;CL:0000738,2.18e-44,136;CL:0002031,1.65e-38,120;CL:0000037,2.91e-35,168;CL:0000988,7.61e-33,177;CL:0002032,1.27e-30,161;CL:0000837,1.27e-30,161;CL:0002393,2.58e-16,9;CL:0002397,2.58e-16,9;CL:0000235,4.67e-13,6;CL:0000134,2.43e-10,354;CL:0000767,6.49e-10,3;CL:0002320,6.55e-10,361;CL:0000226,2.09e-09,3;CL:0000842,2.09e-09,3;CL:0002619,4.59e-09,3;CL:0000219,2.09e-08,386 | |||
|ontology_enrichment_development_v019=CL:0002057;3.61e-54;42!CL:0000049;2.03e-13;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.14e-71!102;UBERON:0003061!3.14e-71!102;UBERON:0002193!3.79e-63!112;UBERON:0002371!5.44e-62!80;UBERON:0001474!1.62e-56!86;UBERON:0002405!3.34e-46!115;UBERON:0004765!1.12e-45!101;UBERON:0001434!1.12e-45!101;UBERON:0003081!1.41e-26!216;UBERON:0002204!3.18e-22!167;UBERON:0000178!4.14e-11!15;UBERON:0000179!4.14e-11!15;UBERON:0000463!4.14e-11!15;UBERON:0002384!5.16e-11!375;UBERON:0000926!2.67e-08!448;UBERON:0004120!2.67e-08!448;UBERON:0006603!2.67e-08!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.40e-11;15!UBERON:0000179;2.40e-11;15!UBERON:0000463;2.40e-11;15!UBERON:0003127;1.98e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.09e-75,98;UBERON:0003061,6.09e-75,98;UBERON:0002371,2.43e-70,76;UBERON:0002193,6.92e-67,108;UBERON:0001474,2.08e-64,82;UBERON:0004765,1.02e-57,90;UBERON:0002405,1.67e-55,93;UBERON:0001434,7.57e-51,100;UBERON:0003081,3.15e-31,203;UBERON:0002204,5.89e-26,167;UBERON:0000926,1.35e-15,315;UBERON:0004120,1.35e-15,315;UBERON:0006603,1.35e-15,315;UBERON:0000178,3.23e-11,15;UBERON:0000179,3.23e-11,15;UBERON:0000463,3.23e-11,15;UBERON:0002384,2.51e-09,371;UBERON:0003127,1.99e-07,2 | |||
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|short_description=p2@ENST00000548626 | |||
}} |
Revision as of 00:12, 11 September 2013
Short description: | p2@ENST00000548626 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ENST00000548626_5end |
Coexpression cluster: | C625_CD14_Neutrophils_Basophils_CD14CD16_Peripheral_Eosinophils_Macrophage |
Association with transcript: | -236bp_to_ENST00000548626_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.09e-75 | 98 |
blood island | 6.09e-75 | 98 |
bone marrow | 2.43e-70 | 76 |
hemolymphoid system | 6.92e-67 | 108 |
bone element | 2.08e-64 | 82 |
skeletal element | 1.02e-57 | 90 |
immune system | 1.67e-55 | 93 |
skeletal system | 7.57e-51 | 100 |
lateral plate mesoderm | 3.15e-31 | 203 |
musculoskeletal system | 5.89e-26 | 167 |
mesoderm | 1.35e-15 | 315 |
mesoderm-derived structure | 1.35e-15 | 315 |
presumptive mesoderm | 1.35e-15 | 315 |
blood | 3.23e-11 | 15 |
haemolymphatic fluid | 3.23e-11 | 15 |
organism substance | 3.23e-11 | 15 |
connective tissue | 2.51e-09 | 371 |
open tracheal system trachea | 1.99e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.