FFCP PHASE1:Hg19::chr12:69633407..69633421,+: Difference between revisions
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{{FFCP | 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4013,5.02780426175919,3.18004350653419,22.3178738353547,0,3.87943538059752,2.4499638188256,6.35869328454949,4.25089728976755,8.14132681191471,2.87162909937057,12.8556565073076,5.53258019713743,3.06803726700517,2.85538840518309,4.02405645854205,0.589848616738702,4.58571496304198,8.43337362897469,3.4324388592045,2.7614397042404,5.56965421925569,5.64077462619429,1.0085253435176,3.12605604493237,16.2382150578482,3.43921026771203,3.40068998299204,6.21345778489231,3.12431239445539,7.64741147054381,4.37569090337957,11.4864709893826,3.83780436800028,4.96211178389294,0.703484977438482,2.93853583571069,12.8568440610789,16.1416186665036,4.85572483389305,8.87882546270061,8.24932042512541,1.84374380089247,6.68803236805932,5.5735181041002,4.93295801721368,3.66400906740301,3.11447925297794,5.0235579424329,6.28462359664008,2.5224494698241,8.21842848458546,2.80705868584208,0.9555033757741,7.50503713854892,14.8532795028763,6.27703696987876,384.400640061003,1.60342272946051,2.07216164163037,3.58508801897295,4.14755797088455,3.44181887056222,3.31329602045583,1.70426809518315,4.23387050190929,5.9567785821453,4.34288939930048,2.8666168169323,5.70462702168741,2.55190607399632,6.09589624911347,2.58971534875158,1.33461648913121,5.799072156691,4.85710993059139,5.38060765962843,1.98950775161368,5.35140408499059,9.6004169733116,2.30875085165401,9.20873345756709,4.01305622161312,5.24542945209498,1.88126918544609,4.4126697915703,13.9049162789959,3.53355240806901,2.97046400327086,6.339835913751,2.71883383500507,7.98863302828755,7.79940444480284,5.89652819957081,2.14264726326789,1.05868461514708,3.2898960342559,8.76403665895821,4.58729283404541,6.30694165866386,8.04634967185241,4.75940431336403,15.2722741619132,5.81929524566941,0.743990036333503,1.38652688589425,2.59575937274273,8.07465118944505,6.55593431782173,14.1902321132809,3.56960904096936,4.80991329478009,1.74600309116205,2.25636785363138,4.54672189309436,3.7514978221865,2.48750831837634,6.4128457434375,4.05144565611864,6.90386851244847,10.592581213105,15.0220808595976,3.47608773999902,4.77353687086237,7.27621880249589,2.8303177226605,3.76456631193809,8.0822463617505,3.80127688581185,3.32660356546013,5.86103533999016,2.7749109928206,0,3.95230889268982,7.03922827210363,10.023798422995,2.03448089157869,2.66302709674205,5.43439242695771,2.8851164307291|short_description=p3@CPSF6}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=11052 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13871 | |||
|TSSclassifier=S | |||
|UniProt=F8VNP8 | |||
|association_with_transcript=0bp_to_ENST00000551516_5end | |||
|coexpression_cluster_id=C153 | |||
|description=CAGE_peak_3_at_CPSF6_5end | |||
|id=chr12:69633407..69633421,+ | |||
|ontology_enrichment_celltype=CL:0000037!7.89e-25!172;CL:0000566!7.89e-25!172;CL:0000988!2.57e-23!182;CL:0002032!7.66e-22!165;CL:0000837!7.66e-22!165;CL:0000738!7.46e-19!140;CL:0002031!7.82e-19!124;CL:0002087!5.48e-18!119;CL:0000542!8.55e-14!53;CL:0000051!8.55e-14!53;CL:0000838!1.79e-13!52;CL:0000763!1.67e-09!112;CL:0000049!1.67e-09!112;CL:0000791!3.70e-09!18;CL:0000789!3.70e-09!18;CL:0002420!3.70e-09!18;CL:0002419!3.70e-09!18;CL:0000790!3.70e-09!18;CL:0000084!3.55e-08!25;CL:0000827!3.55e-08!25;CL:0000860!4.48e-08!45;CL:0002057!8.89e-08!42 | |||
|ontology_enrichment_celltype_v019=CL:0000791;3.56e-09;18!CL:0000789;3.56e-09;18!CL:0002419;3.56e-09;18!CL:0000542;1.97e-08;53!CL:0000084;2.07e-08;25!CL:0000860;1.44e-07;33!CL:0002057;1.44e-07;33!CL:0002087;1.84e-07;104!CL:0000236;4.64e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.68e-25,168;CL:0000988,1.63e-23,177;CL:0002032,2.83e-22,161;CL:0000837,2.83e-22,161;CL:0000738,2.62e-19,136;CL:0002031,2.96e-19,120;CL:0002087,2.07e-18,115;CL:0000542,8.41e-14,53;CL:0000051,8.41e-14,53;CL:0000838,1.76e-13,52;CL:0000763,8.79e-10,108;CL:0000049,8.79e-10,108;CL:0000791,3.66e-09,18;CL:0000789,3.66e-09,18;CL:0002420,3.66e-09,18;CL:0002419,3.66e-09,18;CL:0000790,3.66e-09,18;CL:0000084,3.52e-08,25;CL:0000827,3.52e-08,25;CL:0000860,8.82e-08,42;CL:0002057,8.82e-08,42;CL:0000557,6.35e-07,67;CL:0000839,6.69e-07,66 | |||
|ontology_enrichment_development_v019=CL:0000790;3.56e-09;18!CL:0000051;1.97e-08;53 | |||
|ontology_enrichment_disease=DOID:2531!3.09e-08!51;DOID:0060083!3.09e-08!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,3.07e-08,51;DOID:0060083,3.07e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!9.01e-09!102;UBERON:0003061!9.01e-09!102;UBERON:0002193!2.77e-08!112;UBERON:0000073!1.69e-07!94;UBERON:0001016!1.69e-07!94;UBERON:0001017!2.62e-07!82;UBERON:0005743!6.82e-07!86;UBERON:0002780!7.69e-07!41;UBERON:0001890!7.69e-07!41;UBERON:0006240!7.69e-07!41 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.61e-09,98;UBERON:0003061,5.61e-09,98;UBERON:0002193,1.79e-08,108;UBERON:0001016,2.66e-08,89;UBERON:0001017,1.07e-07,81;UBERON:0000073,4.60e-07,53;UBERON:0002616,4.60e-07,53;UBERON:0001049,5.67e-07,56;UBERON:0005068,5.67e-07,56;UBERON:0006241,5.67e-07,56;UBERON:0007135,5.67e-07,56;UBERON:0002780,7.64e-07,41;UBERON:0001890,7.64e-07,41;UBERON:0003080,7.64e-07,41;UBERON:0006240,7.64e-07,41 | |||
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| |||
|short_description=p3@CPSF6 | |||
}} |
Revision as of 00:10, 11 September 2013
Short description: | p3@CPSF6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_CPSF6_5end |
Coexpression cluster: | C153_rhabdomyosarcoma_liposarcoma_pancreatic_somatostatinoma_Reticulocytes_lymphoma_testicular |
Association with transcript: | 0bp_to_ENST00000551516_5end |
EntrezGene: | CPSF6 |
HGNC: | 13871 |
UniProt: | F8VNP8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 2.68e-25 | 168 |
hematopoietic cell | 1.63e-23 | 177 |
hematopoietic oligopotent progenitor cell | 2.83e-22 | 161 |
hematopoietic multipotent progenitor cell | 2.83e-22 | 161 |
leukocyte | 2.62e-19 | 136 |
hematopoietic lineage restricted progenitor cell | 2.96e-19 | 120 |
nongranular leukocyte | 2.07e-18 | 115 |
lymphocyte | 8.41e-14 | 53 |
common lymphoid progenitor | 8.41e-14 | 53 |
lymphoid lineage restricted progenitor cell | 1.76e-13 | 52 |
myeloid cell | 8.79e-10 | 108 |
common myeloid progenitor | 8.79e-10 | 108 |
mature alpha-beta T cell | 3.66e-09 | 18 |
alpha-beta T cell | 3.66e-09 | 18 |
immature T cell | 3.66e-09 | 18 |
mature T cell | 3.66e-09 | 18 |
immature alpha-beta T cell | 3.66e-09 | 18 |
T cell | 3.52e-08 | 25 |
pro-T cell | 3.52e-08 | 25 |
classical monocyte | 8.82e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.82e-08 | 42 |
granulocyte monocyte progenitor cell | 6.35e-07 | 67 |
myeloid lineage restricted progenitor cell | 6.69e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.61e-09 | 98 |
blood island | 5.61e-09 | 98 |
hemolymphoid system | 1.79e-08 | 108 |
nervous system | 2.66e-08 | 89 |
central nervous system | 1.07e-07 | 81 |
regional part of nervous system | 4.60e-07 | 53 |
regional part of brain | 4.60e-07 | 53 |
neural tube | 5.67e-07 | 56 |
neural rod | 5.67e-07 | 56 |
future spinal cord | 5.67e-07 | 56 |
neural keel | 5.67e-07 | 56 |
regional part of forebrain | 7.64e-07 | 41 |
forebrain | 7.64e-07 | 41 |
anterior neural tube | 7.64e-07 | 41 |
future forebrain | 7.64e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 3.07e-08 | 51 |
immune system cancer | 3.07e-08 | 51 |
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