FFCP PHASE1:Hg19::chr12:67253036..67253040,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C184|description=CAGE_peak_at_chr12:67253036..67253040,-|id=chr12:67253036..67253040,-|ontology_enrichment_celltype=CL:0000064!7.75e-07!3;CL:0005012!7.75e-07!3;CL:0000067!7.75e-07!3;CL:0002304!7.75e-07!3|ontology_enrichment_celltype_v019=CL:0000167;7.48e-30;1!CL:0000164;7.48e-30;1!CL:0000502;7.48e-30;1!CL:0000172;7.48e-30;1!CL:0000173;7.48e-30;1!CL:0000083;2.26e-08;4|ontology_enrichment_celltype_v019_2=CL:0000167,7.48e-30,1;CL:0000164,7.48e-30,1;CL:0000502,7.48e-30,1;CL:0000172,7.48e-30,1;CL:0000173,7.48e-30,1;CL:0002351,7.48e-30,1;CL:0000083,2.43e-08,4|ontology_enrichment_development_v019=CL:0002351;7.48e-30;1!UBERON:0005754;2.37e-29;1!UBERON:0005425;2.37e-29;1!UBERON:0007297;2.05e-15;2!UBERON:0003056;9.90e-11;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:4430;7.48e-30;1!DOID:1799;2.37e-29;1!DOID:10165;2.37e-29;1!DOID:1798;2.37e-29;1!DOID:1793;2.26e-08;4|ontology_enrichment_disease_v019_2=DOID:4430,7.48e-30,1;DOID:1799,3.16e-29,1;DOID:10165,3.16e-29,1;DOID:1798,3.16e-29,1;DOID:1793,2.43e-08,4|ontology_enrichment_uberon=UBERON:0002020!8.50e-22!34;UBERON:0003528!8.50e-22!34;UBERON:0001893!2.39e-19!34;UBERON:0001869!1.15e-18!32;UBERON:0002791!3.94e-18!33;UBERON:0003075!7.62e-18!86;UBERON:0007284!7.62e-18!86;UBERON:0001049!3.19e-17!57;UBERON:0005068!3.19e-17!57;UBERON:0006241!3.19e-17!57;UBERON:0007135!3.19e-17!57;UBERON:0003056!4.10e-17!61;UBERON:0002780!6.81e-17!41;UBERON:0001890!6.81e-17!41;UBERON:0006240!6.81e-17!41;UBERON:0002346!1.28e-16!90;UBERON:0000955!1.64e-16!69;UBERON:0006238!1.64e-16!69;UBERON:0002616!2.18e-16!59;UBERON:0003080!2.36e-16!42;UBERON:0000956!2.47e-15!25;UBERON:0000203!2.47e-15!25;UBERON:0007023!4.96e-15!115;UBERON:0001017!5.38e-15!82;UBERON:0005743!6.31e-15!86;UBERON:0000073!6.75e-15!94;UBERON:0001016!6.75e-15!94;UBERON:0000033!8.37e-14!123;UBERON:0002619!1.80e-13!22;UBERON:0001950!7.92e-13!20;UBERON:0000153!1.11e-12!129;UBERON:0007811!1.11e-12!129;UBERON:0004121!4.23e-12!169;UBERON:0000924!1.50e-11!173;UBERON:0006601!1.50e-11!173;UBERON:0001872!6.85e-11!5;UBERON:0002308!5.19e-08!9;UBERON:0000125!5.19e-08!9;UBERON:0006331!5.09e-07!3;UBERON:0001778!7.75e-07!3;UBERON:0001775!7.75e-07!3;UBERON:0000064!7.79e-07!219|ontology_enrichment_uberon_v019=UBERON:0006947;2.64e-38;3!UBERON:0004054;2.64e-38;3!UBERON:0001000;2.37e-29;1!UBERON:0000998;2.37e-29;1!UBERON:0000941;2.37e-29;1!UBERON:0001785;2.37e-29;1!UBERON:0002464;2.37e-29;1!UBERON:0004904;2.37e-29;1!UBERON:0006868;2.37e-29;1!UBERON:0001021;2.37e-29;1!UBERON:0005352;2.37e-29;1!UBERON:0005904;4.86e-29;4!UBERON:0003714;2.05e-15;2!UBERON:0005162;2.05e-15;2!UBERON:0000122;2.05e-15;2!UBERON:0000058;2.81e-12;10!UBERON:0003135;2.98e-11;11!UBERON:0001872;5.08e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0006947,1.80e-38,3;UBERON:0004054,1.80e-38,3;UBERON:0000998,1.33e-29,1;UBERON:0006868,1.33e-29,1;UBERON:0000941,1.78e-29,1;UBERON:0001785,1.78e-29,1;UBERON:0002464,1.78e-29,1;UBERON:0004904,1.78e-29,1;UBERON:0001021,1.78e-29,1;UBERON:0003902,1.78e-29,1;UBERON:0005425,1.78e-29,1;UBERON:0001000,2.37e-29,1;UBERON:0005352,2.37e-29,1;UBERON:0005904,3.65e-29,4;UBERON:0003714,1.78e-15,2;UBERON:0005162,1.78e-15,2;UBERON:0000122,1.78e-15,2;UBERON:0003135,2.68e-11,11;UBERON:0001781,2.11e-08,4;UBERON:0001872,5.08e-07,5;UBERON:0000058,6.19e-07,19|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472674085820339,0.221729397462564,0.175669571386252,0.0654895377488563,0.364295288292542,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02090169995667,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.562677665642051,0.222617410045812,0,0.63337622438398,0,0,0,0,0,0,0,0.179021174675609,0,0.0986434056369336,0,0,0.969332746095218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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C184 | |||
|description=CAGE_peak_at_chr12:67253036..67253040,- | |||
|id=chr12:67253036..67253040,- | |||
|ontology_enrichment_celltype=CL:0000064!7.75e-07!3;CL:0005012!7.75e-07!3;CL:0000067!7.75e-07!3;CL:0002304!7.75e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000167;7.48e-30;1!CL:0000164;7.48e-30;1!CL:0000502;7.48e-30;1!CL:0000172;7.48e-30;1!CL:0000173;7.48e-30;1!CL:0000083;2.26e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,7.48e-30,1;CL:0000164,7.48e-30,1;CL:0000502,7.48e-30,1;CL:0000172,7.48e-30,1;CL:0000173,7.48e-30,1;CL:0002351,7.48e-30,1;CL:0000083,2.43e-08,4 | |||
|ontology_enrichment_development_v019=CL:0002351;7.48e-30;1!UBERON:0005754;2.37e-29;1!UBERON:0005425;2.37e-29;1!UBERON:0007297;2.05e-15;2!UBERON:0003056;9.90e-11;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4430;7.48e-30;1!DOID:1799;2.37e-29;1!DOID:10165;2.37e-29;1!DOID:1798;2.37e-29;1!DOID:1793;2.26e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,7.48e-30,1;DOID:1799,3.16e-29,1;DOID:10165,3.16e-29,1;DOID:1798,3.16e-29,1;DOID:1793,2.43e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0002020!8.50e-22!34;UBERON:0003528!8.50e-22!34;UBERON:0001893!2.39e-19!34;UBERON:0001869!1.15e-18!32;UBERON:0002791!3.94e-18!33;UBERON:0003075!7.62e-18!86;UBERON:0007284!7.62e-18!86;UBERON:0001049!3.19e-17!57;UBERON:0005068!3.19e-17!57;UBERON:0006241!3.19e-17!57;UBERON:0007135!3.19e-17!57;UBERON:0003056!4.10e-17!61;UBERON:0002780!6.81e-17!41;UBERON:0001890!6.81e-17!41;UBERON:0006240!6.81e-17!41;UBERON:0002346!1.28e-16!90;UBERON:0000955!1.64e-16!69;UBERON:0006238!1.64e-16!69;UBERON:0002616!2.18e-16!59;UBERON:0003080!2.36e-16!42;UBERON:0000956!2.47e-15!25;UBERON:0000203!2.47e-15!25;UBERON:0007023!4.96e-15!115;UBERON:0001017!5.38e-15!82;UBERON:0005743!6.31e-15!86;UBERON:0000073!6.75e-15!94;UBERON:0001016!6.75e-15!94;UBERON:0000033!8.37e-14!123;UBERON:0002619!1.80e-13!22;UBERON:0001950!7.92e-13!20;UBERON:0000153!1.11e-12!129;UBERON:0007811!1.11e-12!129;UBERON:0004121!4.23e-12!169;UBERON:0000924!1.50e-11!173;UBERON:0006601!1.50e-11!173;UBERON:0001872!6.85e-11!5;UBERON:0002308!5.19e-08!9;UBERON:0000125!5.19e-08!9;UBERON:0006331!5.09e-07!3;UBERON:0001778!7.75e-07!3;UBERON:0001775!7.75e-07!3;UBERON:0000064!7.79e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;2.64e-38;3!UBERON:0004054;2.64e-38;3!UBERON:0001000;2.37e-29;1!UBERON:0000998;2.37e-29;1!UBERON:0000941;2.37e-29;1!UBERON:0001785;2.37e-29;1!UBERON:0002464;2.37e-29;1!UBERON:0004904;2.37e-29;1!UBERON:0006868;2.37e-29;1!UBERON:0001021;2.37e-29;1!UBERON:0005352;2.37e-29;1!UBERON:0005904;4.86e-29;4!UBERON:0003714;2.05e-15;2!UBERON:0005162;2.05e-15;2!UBERON:0000122;2.05e-15;2!UBERON:0000058;2.81e-12;10!UBERON:0003135;2.98e-11;11!UBERON:0001872;5.08e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,1.80e-38,3;UBERON:0004054,1.80e-38,3;UBERON:0000998,1.33e-29,1;UBERON:0006868,1.33e-29,1;UBERON:0000941,1.78e-29,1;UBERON:0001785,1.78e-29,1;UBERON:0002464,1.78e-29,1;UBERON:0004904,1.78e-29,1;UBERON:0001021,1.78e-29,1;UBERON:0003902,1.78e-29,1;UBERON:0005425,1.78e-29,1;UBERON:0001000,2.37e-29,1;UBERON:0005352,2.37e-29,1;UBERON:0005904,3.65e-29,4;UBERON:0003714,1.78e-15,2;UBERON:0005162,1.78e-15,2;UBERON:0000122,1.78e-15,2;UBERON:0003135,2.68e-11,11;UBERON:0001781,2.11e-08,4;UBERON:0001872,5.08e-07,5;UBERON:0000058,6.19e-07,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472674085820339,0.221729397462564,0.175669571386252,0.0654895377488563,0.364295288292542,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02090169995667,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.562677665642051,0.222617410045812,0,0.63337622438398,0,0,0,0,0,0,0,0.179021174675609,0,0.0986434056369336,0,0,0.969332746095218,0,0,0.260427761085233,0.174919999992391,0,0,0,0,0.344743373241465,0,0,0,0.241192877250816,0,0,0,0,0,0,0.153900517007594,0,0.23056390438806,0.179515288819544,0.108647371922008,0.31900115973192,0,0,0,0,0,0,0.19606253431774,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18375320854817,0,0.30607276163049,0,0.300646838828985,0.207376382794494,0,0,0,0,0.284609546029793,0,0,0.195984794828755,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0.114536596165916,0.343189995723929,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0.458320848023367,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0.160753148465019,0,0.415440338029185,0,0,0.182248669974074,0,0.157611414598396,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0.18628920882415,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0.214821114084977,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0.138258436151731,0,0,0.327130788511688,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0.321146125482298,0,0,0,0,0.0691572524642179,0.322951291263702,1.42769420259154,0,0,0,0,0,0,0,0.0752103283492573,0,0,1.04762677792569,0,0,0.135075169236789,0.781078098613847,0.206686796501184,0.317079050969534,3.28184885410932,0,0,0,0,0,0,0,0,0.79832133146375,0,0,0.135939465953663,0.263091094251396,0,0.111231401892069,0,0.471346769748006,0,0,0,0,0.0714765441766563,0.158013611732727,0.464965701472501,0,0,0,0.17071847709395,0,0,0,0,1.69354820076372,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0.198950775161368,0.118920090777569,0.11294608203896,0,0,0.154348316215889,0,0,0,6.12759022464227,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0.458729283404541,0.286679166302903,0,0.135982980381829,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0.310298987585686,0,0,0,0,0,0,0.404234377916439,0,0,0.0673520530145875,0.143444410785353,0.332660356546013,0.0814032686109745,0,0,0.0898252021065869,0,0,0.406896178315738,0,0,0 | |||
|short_description=p@chr12:67253036..67253040,- | |||
}} |
Revision as of 00:02, 11 September 2013
Short description: | p@chr12:67253036..67253040, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:67253036..67253040, - |
Coexpression cluster: | C184_somatostatinoma_smallcell_nonsmall_small_gastrointestinal_pineal_thyroid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 7.48e-30 | 1 |
enteroendocrine cell | 7.48e-30 | 1 |
type D enteroendocrine cell | 7.48e-30 | 1 |
somatostatin secreting cell | 7.48e-30 | 1 |
pancreatic D cell | 7.48e-30 | 1 |
progenitor cell of endocrine pancreas | 7.48e-30 | 1 |
epithelial cell of pancreas | 2.43e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 1.80e-38 | 3 |
internal male genitalia | 1.80e-38 | 3 |
seminal vesicle | 1.33e-29 | 1 |
seminal fluid secreting gland | 1.33e-29 | 1 |
cranial nerve II | 1.78e-29 | 1 |
cranial nerve | 1.78e-29 | 1 |
nerve trunk | 1.78e-29 | 1 |
nerve connecting eye with brain | 1.78e-29 | 1 |
nerve | 1.78e-29 | 1 |
retinal neural layer | 1.78e-29 | 1 |
presumptive neural retina | 1.78e-29 | 1 |
vas deferens | 2.37e-29 | 1 |
spermatic cord | 2.37e-29 | 1 |
duct of male reproductive system | 3.65e-29 | 4 |
neural tissue | 1.78e-15 | 2 |
multi cell component structure | 1.78e-15 | 2 |
neuron projection bundle | 1.78e-15 | 2 |
male reproductive organ | 2.68e-11 | 11 |
layer of retina | 2.11e-08 | 4 |
parietal lobe | 5.08e-07 | 5 |
duct | 6.19e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 7.48e-30 | 1 |
islet cell tumor | 3.16e-29 | 1 |
endocrine pancreas cancer | 3.16e-29 | 1 |
pancreatic endocrine carcinoma | 3.16e-29 | 1 |
pancreatic cancer | 2.43e-08 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.