FFCP PHASE1:Hg19::chr12:57590894..57590907,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:57590894..57590907,+|id=chr12:57590894..57590907,+|ontology_enrichment_celltype=CL:0000055!2.53e-09!180;CL:0000057!5.90e-09!75|ontology_enrichment_celltype_v019=CL:0000136;4.68e-11;13!CL:0000135;2.15e-09;3!CL:0000388;2.15e-09;3!CL:0000153;1.02e-08;9!CL:0000447;1.02e-08;9!CL:0000499;3.06e-07;28!CL:0002617;3.29e-07;2|ontology_enrichment_celltype_v019_2=CL:0000136,2.33e-12,15;CL:0002320,1.58e-10,361;CL:0000135,1.05e-09,3;CL:0000388,1.05e-09,3;CL:0000134,6.58e-09,354;CL:0000048,8.34e-09,427;CL:0000153,8.57e-09,9;CL:0000447,8.57e-09,9;CL:0000723,1.64e-08,433;CL:0000034,3.94e-08,441;CL:0000499,2.11e-07,28;CL:0002617,2.12e-07,2;CL:0000057,2.73e-07,76;CL:0000219,3.69e-07,386|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0007846;2.15e-09;3!UBERON:0000043;2.15e-09;3!UBERON:0007845;2.15e-09;3!UBERON:0004457;1.22e-08;9!UBERON:0000042;1.22e-08;9!UBERON:0005406;2.45e-07;2!UBERON:0001013;2.68e-07;14|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.20e-10,371;UBERON:0007846,1.05e-09,3;UBERON:0000043,1.05e-09,3;UBERON:0007845,1.05e-09,3;UBERON:0005406,1.70e-07,2;UBERON:0001013,2.20e-07,14|phase1_expression=1.45342703416445,2.5692062866918,0.140954404095971,5.00366491765652,2.23480547213644,4.36169262050184,0,0.631719873426831,1.82829939739887,0,0.697801167972428,0.218441372130172,0,0.495065411840187,0.662794751455832,1.34465029290355,0.602694528023977,0,0.487932798790507,0,0.408001382488506,0,0.572471974262113,0,0.125542639594803,0,0,0,0,0,0.464448369948228,0,0,0,0,0,0,0,0,0.868043482863407,0.447830948479849,0,0.257575567634187,0.145398238779565,0.377875943688809,0.485168122375632,0.232429036905685,0,0,0,0,0.236482229888585,0,0,1.35426486594342,0.376484679085209,0.272906150057846,0.224723484445085,0,0,1.27867425159808,0,0,0,0,0,0,0.75374599577023,0.521482918420201,0,0.605399502633369,0,0,0.211255286311942,0.212604299965044,0.209658645508376,0.44931452458598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,1.50401373190767,4.20054904986389,0,6.32625331393427,0,0.221729397462564,0.175669571386252,0,0,0.741568885568859,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0.25326102332916,0.264818361626438,2.0078563452417,0,1.12135520028461,0,0,0.311211035399766,0,0.163461903113459,0.756787138224657,2.88087962239999,0,0.312160076830321,0,0.448346041655403,0,0,0,0.204154171254893,0.245668634623536,0.516628905878827,0,1.97813543422845,0,0,0.168336113954066,0.250237039743928,0,0.438977620880838,1.22595118319608,0.150238058906597,0,0.717558542755448,1.2813443329114,0.847727604638247,1.50045548042201,0,0.772921620136887,0.930584281657949,0.675105328965065,0,1.7670364197088,0.368199594569197,1.13152239773168,1.06502877754984,0,0.339121184620975,0.193260853163297,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,1.92972281457866,1.38134921352481,0.928735856063958,0.721879481669586,0.118306800039844,0.168584690078102,0,0.110293972732394,0.217879444092406,0,0,0,0,0,0,0,0,2.53510069643662,1.96565443335525,0,0,0.122988438543114,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0.297262324577456,0,0.16798212819886,0,0.0895585227028483,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0.224262168690721,0,0.07333828582095,0.387815147273333,0,0,0.26593811658487,0,0,0,0,0,1.08524321078289,0,0,0.355391948742546,0,0.904318131178758,0.871533458600294,0.199945982364114,1.2162378064119,0.502257091432126,0,0.239624855491583,0,0,0.579125226670317,1.43833425785268,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,1.10422342547226,0,1.89885516589815,0.207970861530807,0.356857977594324,0.315404830067869,0.35142424497814,0.300946099727719,0,0,0,0.737476674166813,0.347534457872331,0.391602314925481,1.71571711905428,0,0,0.106727557803444,0.303127571446259,0,0.30239029332968,1.24053903909388,0.767309866440312,5.61320188866147,0.256278298511402,0.511707249066704,1.76939313257968,1.48418066444991,0.462629081407967,0.355123450626254,0.0821271560138091,0,0.348631135379878,0,0.601519410909855,0,0.459257792658427,0.546273504020151,1.44236856455367,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0.656029291399411,0,0,0.0915694648183434,0,0,0.650060246036521,3.21367859688319,0,0.154048617114644,0,0,0.322260734604821,0.290033387828457,0.170453254832202,0.267096106940212,0,0,0,0.10115778085555,0.464845549297286,0.94443704049192,0,0.924100740528266,0,0,0,0,0,0,0.571890581771475,0.255897791311334,0,0.318203247925937,0.78494864019923,0.179872457583315,0.274537029736055,0.471249609382746,0,0,0.421258456238981,0.48763373908959,0.2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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:57590894..57590907,+ | |||
|id=chr12:57590894..57590907,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.53e-09!180;CL:0000057!5.90e-09!75 | |||
|ontology_enrichment_celltype_v019=CL:0000136;4.68e-11;13!CL:0000135;2.15e-09;3!CL:0000388;2.15e-09;3!CL:0000153;1.02e-08;9!CL:0000447;1.02e-08;9!CL:0000499;3.06e-07;28!CL:0002617;3.29e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,2.33e-12,15;CL:0002320,1.58e-10,361;CL:0000135,1.05e-09,3;CL:0000388,1.05e-09,3;CL:0000134,6.58e-09,354;CL:0000048,8.34e-09,427;CL:0000153,8.57e-09,9;CL:0000447,8.57e-09,9;CL:0000723,1.64e-08,433;CL:0000034,3.94e-08,441;CL:0000499,2.11e-07,28;CL:0002617,2.12e-07,2;CL:0000057,2.73e-07,76;CL:0000219,3.69e-07,386 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;2.15e-09;3!UBERON:0000043;2.15e-09;3!UBERON:0007845;2.15e-09;3!UBERON:0004457;1.22e-08;9!UBERON:0000042;1.22e-08;9!UBERON:0005406;2.45e-07;2!UBERON:0001013;2.68e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.20e-10,371;UBERON:0007846,1.05e-09,3;UBERON:0000043,1.05e-09,3;UBERON:0007845,1.05e-09,3;UBERON:0005406,1.70e-07,2;UBERON:0001013,2.20e-07,14 | |||
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| |||
|short_description=p@chr12:57590894..57590907,+ | |||
}} |
Revision as of 23:38, 10 September 2013
Short description: | p@chr12:57590894..57590907, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:57590894..57590907, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 2.33e-12 | 15 |
connective tissue cell | 1.58e-10 | 361 |
fibrocyte | 1.05e-09 | 3 |
tendon cell | 1.05e-09 | 3 |
mesenchymal cell | 6.58e-09 | 354 |
multi fate stem cell | 8.34e-09 | 427 |
GAG secreting cell | 8.57e-09 | 9 |
carbohydrate secreting cell | 8.57e-09 | 9 |
somatic stem cell | 1.64e-08 | 433 |
stem cell | 3.94e-08 | 441 |
stromal cell | 2.11e-07 | 28 |
adipocyte of breast | 2.12e-07 | 2 |
fibroblast | 2.73e-07 | 76 |
motile cell | 3.69e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.20e-10 | 371 |
dense regular connective tissue | 1.05e-09 | 3 |
tendon | 1.05e-09 | 3 |
regular connective tissue | 1.05e-09 | 3 |
perirenal fat | 1.70e-07 | 2 |
adipose tissue | 2.20e-07 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.