FFCP PHASE1:Hg19::chr12:54367012..54367025,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3227|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=5123|TSSclassifier=S|UniProt=O43248|association_with_transcript=100bp_to_ENST00000243082_5end|coexpression_cluster_id=C1676|description=CAGE_peak_5_at_HOXC11_5end|id=chr12:54367012..54367025,+|ontology_enrichment_celltype=CL:0002594!1.63e-09!4;CL:0002150!7.52e-08!3;CL:0000861!7.52e-08!3;CL:0002178!4.39e-07!3|ontology_enrichment_celltype_v019=CL:0002594;4.65e-10;4|ontology_enrichment_celltype_v019_2=CL:0002594,4.55e-10,4|ontology_enrichment_development_v019=UBERON:0008425;7.40e-11;1|ontology_enrichment_disease=DOID:0050687!1.00e-14!143;DOID:305!4.73e-09!106;DOID:14566!6.18e-08!239;DOID:162!7.58e-08!235|ontology_enrichment_disease_v019=DOID:171;1.04e-08;10!DOID:1115;1.81e-07;20|ontology_enrichment_disease_v019_2=DOID:171,1.27e-08,10;DOID:0050687,1.39e-08,143;DOID:1115,1.97e-07,20|ontology_enrichment_uberon=UBERON:0001737!5.32e-18!9;UBERON:0001310!1.63e-09!4;UBERON:0001557!4.50e-09!19|ontology_enrichment_uberon_v019=UBERON:0002346;4.65e-10;4!UBERON:0000923;4.65e-10;4!UBERON:0010316;4.65e-10;4!UBERON:0005291;4.65e-10;4!UBERON:0001310;4.65e-10;4!UBERON:0010260;1.27e-09;9!UBERON:0002050;3.21e-08;5!UBERON:0005423;3.21e-08;5|ontology_enrichment_uberon_v019_2=UBERON:0001310,4.55e-10,4;UBERON:0010260,1.37e-09,9|phase1_expression=0,0,0,0,0,0,0,0,0.522371256399677,0,0,0,0,0.495065411840187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434539556882471,1.5905718941022,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597794722207204,0.587172493218824,0,0,0,0,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37223371266318,0.168776332241266,0.292311015483596,0,0,0,0,0,1.69560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18306800039844,0.505754070234305,0.723033089650446,0.882351781859152,0.653638332277218,0.71181185733329,0.404493924480493,0.98110732562673,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.301586917234893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0.308482478109971,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0.823240336780769,0.977208552881205,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,3.90405012845728,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0.650060246036521,0,1.25671933779759,0,0,0,0.107420244868274,0.290033387828457,0,0.712256285173899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43492452355245,1.239293992399,0.845086807596724,0.286822704408103,1.17898849215745,0.7133421029625,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38871292465715,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748562161632879,0,0,0,0.284136146806413,0,0.296964680832639,0,0,0,0,0,4.22250816255987,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,5.68489999975272,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871507708151921,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,2.41890828222713,3.80064448848165,1.14961639874493,0,0,0,0,0,0,0.586654148204409,0,0,0.19980960958213,1.29681375438695,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50313580350515,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0.438568099157414,0,0,0,0,0,0.607719912354764,0,0,0,0,0.327609848846413,0,0.633936370075881,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,2.33832412111851,0.743614585554013,1.11728983594649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0.795664888465099,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23109871051734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.5224494698241,0,0,0,0,0,1.97610423125813,1.04314963381548,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0.98150233615243,0.243835849964539,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0.235676547101626,0,0,0,0.679708458751268,0,0,0,0,0,0.320965466756673,0,0,0,6.46863404992057,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0|short_description=p5@HOXC11}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=3227 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5123 | |||
|TSSclassifier=S | |||
|UniProt=O43248 | |||
|association_with_transcript=100bp_to_ENST00000243082_5end | |||
|coexpression_cluster_id=C1676 | |||
|description=CAGE_peak_5_at_HOXC11_5end | |||
|id=chr12:54367012..54367025,+ | |||
|ontology_enrichment_celltype=CL:0002594!1.63e-09!4;CL:0002150!7.52e-08!3;CL:0000861!7.52e-08!3;CL:0002178!4.39e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002594;4.65e-10;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002594,4.55e-10,4 | |||
|ontology_enrichment_development_v019=UBERON:0008425;7.40e-11;1 | |||
|ontology_enrichment_disease=DOID:0050687!1.00e-14!143;DOID:305!4.73e-09!106;DOID:14566!6.18e-08!239;DOID:162!7.58e-08!235 | |||
|ontology_enrichment_disease_v019=DOID:171;1.04e-08;10!DOID:1115;1.81e-07;20 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.27e-08,10;DOID:0050687,1.39e-08,143;DOID:1115,1.97e-07,20 | |||
|ontology_enrichment_uberon=UBERON:0001737!5.32e-18!9;UBERON:0001310!1.63e-09!4;UBERON:0001557!4.50e-09!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;4.65e-10;4!UBERON:0000923;4.65e-10;4!UBERON:0010316;4.65e-10;4!UBERON:0005291;4.65e-10;4!UBERON:0001310;4.65e-10;4!UBERON:0010260;1.27e-09;9!UBERON:0002050;3.21e-08;5!UBERON:0005423;3.21e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001310,4.55e-10,4;UBERON:0010260,1.37e-09,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.522371256399677,0,0,0,0,0.495065411840187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434539556882471,1.5905718941022,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597794722207204,0.587172493218824,0,0,0,0,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37223371266318,0.168776332241266,0.292311015483596,0,0,0,0,0,1.69560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18306800039844,0.505754070234305,0.723033089650446,0.882351781859152,0.653638332277218,0.71181185733329,0.404493924480493,0.98110732562673,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.301586917234893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0.308482478109971,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0.823240336780769,0.977208552881205,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,3.90405012845728,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0.650060246036521,0,1.25671933779759,0,0,0,0.107420244868274,0.290033387828457,0,0.712256285173899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43492452355245,1.239293992399,0.845086807596724,0.286822704408103,1.17898849215745,0.7133421029625,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38871292465715,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748562161632879,0,0,0,0.284136146806413,0,0.296964680832639,0,0,0,0,0,4.22250816255987,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,5.68489999975272,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871507708151921,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,2.41890828222713,3.80064448848165,1.14961639874493,0,0,0,0,0,0,0.586654148204409,0,0,0.19980960958213,1.29681375438695,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50313580350515,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0.438568099157414,0,0,0,0,0,0.607719912354764,0,0,0,0,0.327609848846413,0,0.633936370075881,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,2.33832412111851,0.743614585554013,1.11728983594649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0.795664888465099,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23109871051734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.5224494698241,0,0,0,0,0,1.97610423125813,1.04314963381548,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0.98150233615243,0.243835849964539,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0.235676547101626,0,0,0,0.679708458751268,0,0,0,0,0,0.320965466756673,0,0,0,6.46863404992057,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p5@HOXC11 | |||
}} |
Revision as of 23:20, 10 September 2013
Short description: | p5@HOXC11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_HOXC11_5end |
Coexpression cluster: | C1676_neuroectodermal_synovial_breast_anaplastic_epitheloid_rhabdomyosarcoma_neuroepithelioma |
Association with transcript: | 100bp_to_ENST00000243082_5end |
EntrezGene: | HOXC11 |
HGNC: | 5123 |
UniProt: | O43248 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the umbilical artery | 4.55e-10 | 4 |
Ontology term | p-value | n |
---|---|---|
umbilical artery | 4.55e-10 | 4 |
umbilical blood vessel | 1.37e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.27e-08 | 10 |
cell type cancer | 1.39e-08 | 143 |
sarcoma | 1.97e-07 | 20 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.