FFCP PHASE1:Hg19::chr12:48499883..48499915,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5213|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=8877|TSSclassifier=S|UniProt=F8VNZ1,F8VTT5,F8VVE3|association_with_transcript=0bp_to_ENST00000546755,ENST00000547581,ENST00000549366_5end|coexpression_cluster_id=C1|description=CAGE_peak_5_at_PFKM_5end|id=chr12:48499883..48499915,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002780!9.64e-07!41;UBERON:0001890!9.64e-07!41;UBERON:0006240!9.64e-07!41|ontology_enrichment_uberon_v019=UBERON:0001894;6.59e-09;7|ontology_enrichment_uberon_v019_2=UBERON:0001894,1.33e-09,7;UBERON:0006222,1.33e-09,7;UBERON:0002780,2.64e-07,41;UBERON:0001890,2.64e-07,41;UBERON:0003080,2.64e-07,41;UBERON:0006240,2.64e-07,41|phase1_expression=0.181678379270557,0.214100523890983,0.281908808191942,0,0.893922188854576,0,0,0.631719873426831,0.783556884599516,0,1.39560233594486,0.218441372130172,0,0.123766352960047,0,0,1.20538905604795,0.730310090387373,0,0.61560529038394,0,0,0.286235987131057,0.547497700291537,0.376627918784408,0.458480434487708,0.164201178899891,0.314843125254717,0.393364276848904,0,0.464448369948228,1.83884244895785,0.6024118375565,1.47901604066715,0.232401601740905,0,0.587200878669695,0.553995408531877,0,0.217010870715852,0,0.32389366601898,0,0.290796477559129,0.377875943688809,0.485168122375632,0.232429036905685,1.23350366406548,0.309706370895104,0.28769239232215,0.768482119587302,0.945928919554341,0,1.93645405075148,0,0.752969358170419,1.09162460023138,0.224723484445085,0.306083892370903,0.320929027076094,2.55734850319616,0.329851300186716,0,0.852449501065388,0.290209238628584,0,0,0,0,0.868755378820466,0,0,0.316462387440884,0.633765858935825,0.212604299965044,0.209658645508376,0.44931452458598,0,0.16072558669708,0.855038231223746,0.79566670879636,0.365328307529268,0,0.546138611262131,0,0,0.400395987036012,1.14950487990897,0.661044872784862,0,0,0.587237189370939,0.382273228125229,0,0,0.263384084775077,0.196709770113833,1.17903228824749,0.205601498999509,0.167186495390678,0,0.473447805734733,1.94826728407911,0.222820913770347,0.294605907474837,0,0.270803863765016,0.25618263945135,0.260118695119756,0.164437904603676,0.276350017785848,0.289803085735052,0.296573126324121,0.535081656179426,1.04535523804977,0.226618685395132,0,0,0,0.637130828648193,0,0,0.451725357233318,0.255973222308837,0,0.473554504088034,0,0.201606743224732,0,0.724122019413995,0,0,0,0.722878304769133,0.50133791063589,0.579386075843295,0,0.973269740605272,0.283604451492204,0,0.351339142772504,5.50112117090393,1.09288586487763,1.85392221392215,0.324547393654683,0.174129737299267,0.26591592103773,0,0,0.371457501329565,0.39752481473341,0,0,0.56530794192401,0,0.275118041940067,0.626984899610432,0.258416759169329,0,0,0.805658634218294,0.760272105718513,0.488124115096339,0,0.81014194788176,0.446498641420399,0,0.112611480483322,1.53316637465883,0,0.366403487860815,1.31780417436063,0,0,0,0.12663051166458,1.19168262731897,0.573673241497627,0.354668382198357,0.560677600142307,1.06748995729705,0.24666754841716,0,0.269421344139376,0,0.302714855289863,0,0.234321431833797,0.312160076830321,0,0.298897361103602,0.469737994575059,0.647491777472526,0,0.204154171254893,0.245668634623536,0.309977343527296,0,0,0,0.718618141816238,0,0,0.277064115484183,0,0,0,0.113432183160021,0.717558542755448,0.213557388818567,0,0.600182192168805,0.206105058476878,0.772921620136887,0.18611685633159,0.843881661206331,0.0974370051611986,0.757301322732344,0.0920498986422993,0.646584227275248,0.355009592516614,0.604512589365842,0.339121184620975,0.193260853163297,0,0.573609190778008,0.609868530647977,0.265059536642971,0.813357600086629,0.310983165046111,0,0.36497735907583,0,0.643240938192885,0,1.85747171212792,1.44375896333917,0.828147600278907,1.18009283054671,0.964044119533928,0.330881918197182,0.871517776369625,0.237270619111097,0.943819157121151,0.392442930250692,0.769494313892781,0,0,0.8231480226628,0,0,0.982827216677626,0.590789906681404,0.441463099414651,0.737930631258681,0.171567810298526,0,2.24803506515239,0,0.462942225792648,0.325808305310325,0,0,0.115930404975077,0,0.433099343283221,0,0.761016608938393,1.58040879591855,1.71697232418975,0,0.234004265139238,0,0,0.335964256397719,0.425325291727159,0.358234090811393,1.16253575405585,0.383382679165211,0,0,0.414656231081544,0.144119953416961,0,0.380987365753014,0.381988425558278,0,1.71072446022705,0.102827492703324,0.600686115687835,0.285826432630578,0.336393253036082,0.43596006883328,0.36669142910475,0.646358578788889,0,0,0.531876233169741,0,0.514414748524284,0,0.266422179016099,0.428933980974443,0,0.823240336780769,0.325736184293735,0,0,0,0,0.399891964728228,1.2162378064119,0.502257091432126,0,0.239624855491583,1.14861935834114,0,0.579125226670317,0.61642896765115,0.358121926479791,0.784596007954691,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5213 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8877 | |||
|TSSclassifier=S | |||
|UniProt=F8VNZ1,F8VTT5,F8VVE3 | |||
|association_with_transcript=0bp_to_ENST00000546755,ENST00000547581,ENST00000549366_5end | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_5_at_PFKM_5end | |||
|id=chr12:48499883..48499915,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!9.64e-07!41;UBERON:0001890!9.64e-07!41;UBERON:0006240!9.64e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0001894;6.59e-09;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001894,1.33e-09,7;UBERON:0006222,1.33e-09,7;UBERON:0002780,2.64e-07,41;UBERON:0001890,2.64e-07,41;UBERON:0003080,2.64e-07,41;UBERON:0006240,2.64e-07,41 | |||
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| |||
|short_description=p5@PFKM | |||
}} |
Revision as of 22:48, 10 September 2013
Short description: | p5@PFKM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_PFKM_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000546755, ENST00000547581, ENST00000549366_5end |
EntrezGene: | PFKM |
HGNC: | 8877 |
UniProt: | F8VNZ1F8VTT5F8VVE3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
diencephalon | 1.33e-09 | 7 |
future diencephalon | 1.33e-09 | 7 |
regional part of forebrain | 2.64e-07 | 41 |
forebrain | 2.64e-07 | 41 |
anterior neural tube | 2.64e-07 | 41 |
future forebrain | 2.64e-07 | 41 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.