FFCP PHASE1:Hg19::chr12:45269281..45269294,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4753|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7751|TSSclassifier=S|UniProt=F8VZ72|association_with_transcript=-30bp_to_ENST00000553120_5end|description=CAGE_peak_13_at_NELL2_5end|id=chr12:45269281..45269294,-|ontology_enrichment_celltype=CL:0000791!7.58e-15!18;CL:0000789!7.58e-15!18;CL:0002420!7.58e-15!18;CL:0002419!7.58e-15!18;CL:0000790!7.58e-15!18;CL:0000625!6.34e-12!11;CL:0000084!9.37e-10!25;CL:0000827!9.37e-10!25;CL:0000842!2.82e-07!3|ontology_enrichment_celltype_v019=CL:0000625;1.10e-42;11!CL:0000791;4.06e-40;18!CL:0000789;4.06e-40;18!CL:0002419;4.06e-40;18!CL:0000084;1.92e-28;25!CL:0000226;1.32e-22;3!CL:0000842;1.32e-22;3|ontology_enrichment_celltype_v019_2=CL:0000625,5.34e-43,11;CL:0000791,1.61e-40,18;CL:0000789,1.61e-40,18;CL:0002420,1.61e-40,18;CL:0002419,1.61e-40,18;CL:0000790,1.61e-40,18;CL:0000084,9.95e-29,25;CL:0000827,9.95e-29,25;CL:0000226,1.03e-22,3;CL:0000842,1.03e-22,3;CL:0000838,5.88e-13,52;CL:0000542,1.11e-12,53;CL:0000051,1.11e-12,53;CL:0002087,1.38e-08,115;CL:0000738,6.56e-07,136|ontology_enrichment_development_v019=CL:0000790;4.06e-40;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.44e-39!115;UBERON:0001049!9.67e-35!57;UBERON:0005068!9.67e-35!57;UBERON:0006241!9.67e-35!57;UBERON:0007135!9.67e-35!57;UBERON:0005743!7.07e-33!86;UBERON:0001017!1.52e-31!82;UBERON:0002616!3.60e-31!59;UBERON:0000955!2.84e-30!69;UBERON:0006238!2.84e-30!69;UBERON:0000073!4.32e-30!94;UBERON:0001016!4.32e-30!94;UBERON:0002619!1.05e-29!22;UBERON:0003075!5.47e-29!86;UBERON:0007284!5.47e-29!86;UBERON:0002780!6.95e-29!41;UBERON:0001890!6.95e-29!41;UBERON:0006240!6.95e-29!41;UBERON:0002346!9.38e-29!90;UBERON:0002020!2.25e-28!34;UBERON:0003528!2.25e-28!34;UBERON:0001893!2.46e-28!34;UBERON:0001869!3.71e-28!32;UBERON:0003080!5.27e-28!42;UBERON:0002791!7.15e-27!33;UBERON:0001950!1.58e-26!20;UBERON:0000956!1.52e-25!25;UBERON:0000203!1.52e-25!25;UBERON:0000153!3.31e-25!129;UBERON:0007811!3.31e-25!129;UBERON:0003056!3.53e-24!61;UBERON:0000033!1.98e-22!123;UBERON:0000924!6.62e-16!173;UBERON:0006601!6.62e-16!173;UBERON:0004121!1.09e-15!169;UBERON:0000200!1.83e-11!6;UBERON:0002021!2.61e-10!5;UBERON:0001871!2.65e-08!7;UBERON:0004733!3.61e-08!12;UBERON:0002028!3.61e-08!12;UBERON:0007277!3.61e-08!12;UBERON:0003076!5.96e-08!15;UBERON:0003057!5.96e-08!15;UBERON:0002298!1.66e-07!8;UBERON:0004732!1.98e-07!13|ontology_enrichment_uberon_v019=UBERON:0002021;8.29e-14;5!UBERON:0002902;1.09e-08;1!UBERON:0003112;1.09e-08;1!UBERON:0011158;1.09e-08;1!UBERON:0009899;1.09e-08;1!UBERON:0003128;1.09e-08;1!UBERON:0001703;1.09e-08;1!UBERON:0002241;1.09e-08;1!UBERON:0001950;1.36e-08;20!UBERON:0000178;3.94e-08;15!UBERON:0000179;3.94e-08;15!UBERON:0000463;3.94e-08;15!UBERON:0002619;7.93e-08;22!UBERON:0000956;6.71e-07;25!UBERON:0000203;6.71e-07;25|ontology_enrichment_uberon_v019_2=UBERON:0002021,9.71e-14,5;UBERON:0002902,9.74e-09,1;UBERON:0009899,9.74e-09,1;UBERON:0001950,1.74e-08,20;UBERON:0003112,1.78e-08,1;UBERON:0011158,1.78e-08,1;UBERON:0003128,1.78e-08,1;UBERON:0001703,1.78e-08,1;UBERON:0002241,1.78e-08,1;UBERON:0004761,1.78e-08,1;UBERON:0009617,1.78e-08,1;UBERON:0000178,3.73e-08,15;UBERON:0000179,3.73e-08,15;UBERON:0000463,3.73e-08,15;UBERON:0002619,9.87e-08,22;UBERON:0001017,4.13e-07,81;UBERON:0000955,4.70e-07,68;UBERON:0006238,4.70e-07,68;UBERON:0000956,8.12e-07,25;UBERON:0000203,8.12e-07,25|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.464448369948228,0,0,0,0,0,0,0,0.200544447470142,0.868043482863407,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0.639337125799041,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.93419540227666,1.96505381374582,0.616804496998528,0,0,0,0,0,0,0,0,0,0,0.328875809207352,0,0,1.92772532110679,4.0131124213457,0,0,0.383220493601921,0.34362744548263,0.506039384039006,2.54852331459277,1.95325036156926,0,1.6563263098555,2.04778577847069,0,1.65744076430812,0,4.23374160771938,1.87208137048455,5.93780055919476,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.256686072559497,0,0,0,0.335032530668698,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86091223510599,1.72571360654893,1.38745825144478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4753 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7751 | |||
|TSSclassifier=S | |||
|UniProt=F8VZ72 | |||
|association_with_transcript=-30bp_to_ENST00000553120_5end | |||
|description=CAGE_peak_13_at_NELL2_5end | |||
|id=chr12:45269281..45269294,- | |||
|ontology_enrichment_celltype=CL:0000791!7.58e-15!18;CL:0000789!7.58e-15!18;CL:0002420!7.58e-15!18;CL:0002419!7.58e-15!18;CL:0000790!7.58e-15!18;CL:0000625!6.34e-12!11;CL:0000084!9.37e-10!25;CL:0000827!9.37e-10!25;CL:0000842!2.82e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000625;1.10e-42;11!CL:0000791;4.06e-40;18!CL:0000789;4.06e-40;18!CL:0002419;4.06e-40;18!CL:0000084;1.92e-28;25!CL:0000226;1.32e-22;3!CL:0000842;1.32e-22;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,5.34e-43,11;CL:0000791,1.61e-40,18;CL:0000789,1.61e-40,18;CL:0002420,1.61e-40,18;CL:0002419,1.61e-40,18;CL:0000790,1.61e-40,18;CL:0000084,9.95e-29,25;CL:0000827,9.95e-29,25;CL:0000226,1.03e-22,3;CL:0000842,1.03e-22,3;CL:0000838,5.88e-13,52;CL:0000542,1.11e-12,53;CL:0000051,1.11e-12,53;CL:0002087,1.38e-08,115;CL:0000738,6.56e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000790;4.06e-40;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.44e-39!115;UBERON:0001049!9.67e-35!57;UBERON:0005068!9.67e-35!57;UBERON:0006241!9.67e-35!57;UBERON:0007135!9.67e-35!57;UBERON:0005743!7.07e-33!86;UBERON:0001017!1.52e-31!82;UBERON:0002616!3.60e-31!59;UBERON:0000955!2.84e-30!69;UBERON:0006238!2.84e-30!69;UBERON:0000073!4.32e-30!94;UBERON:0001016!4.32e-30!94;UBERON:0002619!1.05e-29!22;UBERON:0003075!5.47e-29!86;UBERON:0007284!5.47e-29!86;UBERON:0002780!6.95e-29!41;UBERON:0001890!6.95e-29!41;UBERON:0006240!6.95e-29!41;UBERON:0002346!9.38e-29!90;UBERON:0002020!2.25e-28!34;UBERON:0003528!2.25e-28!34;UBERON:0001893!2.46e-28!34;UBERON:0001869!3.71e-28!32;UBERON:0003080!5.27e-28!42;UBERON:0002791!7.15e-27!33;UBERON:0001950!1.58e-26!20;UBERON:0000956!1.52e-25!25;UBERON:0000203!1.52e-25!25;UBERON:0000153!3.31e-25!129;UBERON:0007811!3.31e-25!129;UBERON:0003056!3.53e-24!61;UBERON:0000033!1.98e-22!123;UBERON:0000924!6.62e-16!173;UBERON:0006601!6.62e-16!173;UBERON:0004121!1.09e-15!169;UBERON:0000200!1.83e-11!6;UBERON:0002021!2.61e-10!5;UBERON:0001871!2.65e-08!7;UBERON:0004733!3.61e-08!12;UBERON:0002028!3.61e-08!12;UBERON:0007277!3.61e-08!12;UBERON:0003076!5.96e-08!15;UBERON:0003057!5.96e-08!15;UBERON:0002298!1.66e-07!8;UBERON:0004732!1.98e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0002021;8.29e-14;5!UBERON:0002902;1.09e-08;1!UBERON:0003112;1.09e-08;1!UBERON:0011158;1.09e-08;1!UBERON:0009899;1.09e-08;1!UBERON:0003128;1.09e-08;1!UBERON:0001703;1.09e-08;1!UBERON:0002241;1.09e-08;1!UBERON:0001950;1.36e-08;20!UBERON:0000178;3.94e-08;15!UBERON:0000179;3.94e-08;15!UBERON:0000463;3.94e-08;15!UBERON:0002619;7.93e-08;22!UBERON:0000956;6.71e-07;25!UBERON:0000203;6.71e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,9.71e-14,5;UBERON:0002902,9.74e-09,1;UBERON:0009899,9.74e-09,1;UBERON:0001950,1.74e-08,20;UBERON:0003112,1.78e-08,1;UBERON:0011158,1.78e-08,1;UBERON:0003128,1.78e-08,1;UBERON:0001703,1.78e-08,1;UBERON:0002241,1.78e-08,1;UBERON:0004761,1.78e-08,1;UBERON:0009617,1.78e-08,1;UBERON:0000178,3.73e-08,15;UBERON:0000179,3.73e-08,15;UBERON:0000463,3.73e-08,15;UBERON:0002619,9.87e-08,22;UBERON:0001017,4.13e-07,81;UBERON:0000955,4.70e-07,68;UBERON:0006238,4.70e-07,68;UBERON:0000956,8.12e-07,25;UBERON:0000203,8.12e-07,25 | |||
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|short_description=p13@NELL2 | |||
}} |
Revision as of 22:40, 10 September 2013
Short description: | p13@NELL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_NELL2_5end |
Coexpression cluster: | NA |
Association with transcript: | -30bp_to_ENST00000553120_5end |
EntrezGene: | NELL2 |
HGNC: | 7751 |
UniProt: | F8VZ72 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 5.34e-43 | 11 |
mature alpha-beta T cell | 1.61e-40 | 18 |
alpha-beta T cell | 1.61e-40 | 18 |
immature T cell | 1.61e-40 | 18 |
mature T cell | 1.61e-40 | 18 |
immature alpha-beta T cell | 1.61e-40 | 18 |
T cell | 9.95e-29 | 25 |
pro-T cell | 9.95e-29 | 25 |
single nucleate cell | 1.03e-22 | 3 |
mononuclear cell | 1.03e-22 | 3 |
lymphoid lineage restricted progenitor cell | 5.88e-13 | 52 |
lymphocyte | 1.11e-12 | 53 |
common lymphoid progenitor | 1.11e-12 | 53 |
nongranular leukocyte | 1.38e-08 | 115 |
leukocyte | 6.56e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 9.71e-14 | 5 |
occipital pole | 9.74e-09 | 1 |
pole of cerebral hemisphere | 9.74e-09 | 1 |
neocortex | 1.74e-08 | 20 |
olfactory region | 1.78e-08 | 1 |
primary subdivision of skull | 1.78e-08 | 1 |
cranium | 1.78e-08 | 1 |
neurocranium | 1.78e-08 | 1 |
chondrocranium | 1.78e-08 | 1 |
cartilaginous neurocranium | 1.78e-08 | 1 |
head paraxial mesoderm | 1.78e-08 | 1 |
blood | 3.73e-08 | 15 |
haemolymphatic fluid | 3.73e-08 | 15 |
organism substance | 3.73e-08 | 15 |
regional part of cerebral cortex | 9.87e-08 | 22 |
central nervous system | 4.13e-07 | 81 |
brain | 4.70e-07 | 68 |
future brain | 4.70e-07 | 68 |
cerebral cortex | 8.12e-07 | 25 |
pallium | 8.12e-07 | 25 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.