FFCP PHASE1:Hg19::chr12:32418225..32418236,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C682|description=CAGE_peak_at_chr12:32418225..32418236,+|id=chr12:32418225..32418236,+|ontology_enrichment_celltype=CL:0000945!7.06e-57!24;CL:0000826!7.06e-57!24;CL:0000236!4.82e-41!14;CL:0000542!5.45e-32!53;CL:0000051!5.45e-32!53;CL:0000838!1.38e-28!52;CL:0000784!2.10e-22!3;CL:0000817!4.34e-22!3;CL:0000738!8.22e-17!140;CL:0002087!3.99e-16!119;CL:0000785!3.46e-15!2;CL:0000955!3.46e-15!2;CL:0000818!3.46e-15!2;CL:0000954!3.46e-15!2;CL:0000816!3.46e-15!2;CL:0000037!1.50e-14!172;CL:0000566!1.50e-14!172;CL:0000988!1.54e-13!182;CL:0002031!8.53e-12!124;CL:0002032!1.12e-10!165;CL:0000837!1.12e-10!165;CL:0000819!1.10e-08!1;CL:0000946!3.28e-08!1;CL:0000786!3.28e-08!1;CL:0000980!3.28e-08!1|ontology_enrichment_celltype_v019=CL:0000945;1.68e-49;24!CL:0000236;7.59e-41;13!CL:0000542;1.04e-22;53|ontology_enrichment_celltype_v019_2=CL:0000945,1.68e-49,24;CL:0000826,1.68e-49,24;CL:0000236,5.45e-38,14;CL:0000838,3.32e-23,52;CL:0000542,8.88e-23,53;CL:0000051,8.88e-23,53;CL:0002087,1.15e-10,115;CL:0002031,3.06e-10,120;CL:0000738,4.36e-09,136;CL:0002032,9.83e-08,161;CL:0000837,9.83e-08,161;CL:0000037,2.00e-07,168;CL:0000988,4.60e-07,177|ontology_enrichment_development_v019=CL:0000051;1.04e-22;53|ontology_enrichment_disease=DOID:0060058!3.90e-12!10;DOID:0060073!1.10e-08!1;DOID:8675!1.10e-08!1;DOID:12603!1.71e-08!1;DOID:630!1.98e-08!1;DOID:0050177!1.98e-08!1;DOID:0050427!1.98e-08!1;DOID:2531!5.25e-08!51;DOID:0060083!5.25e-08!51|ontology_enrichment_disease_v019=DOID:0060058;3.04e-14;10|ontology_enrichment_disease_v019_2=DOID:0060058,3.04e-14,10|ontology_enrichment_uberon=UBERON:0002106!4.82e-10!3;UBERON:0004854!4.82e-10!3;UBERON:0009034!4.82e-10!3;UBERON:0002095!4.82e-10!3;UBERON:0004782!4.82e-10!3;UBERON:0003281!4.82e-10!3;UBERON:0009664!4.82e-10!3;UBERON:0002296!4.82e-10!3;UBERON:0005602!4.82e-10!3;UBERON:0001179!4.82e-10!3;UBERON:0006293!4.82e-10!3;UBERON:0004177!2.27e-09!7;UBERON:0002372!2.84e-08!1;UBERON:0001961!2.84e-08!1;UBERON:0001744!2.84e-08!1;UBERON:0001735!2.84e-08!1|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,3.79589282843478,1.42169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,3.27683166757279,0.889509253863555,0,0,1.72425731986345,0,0,1.1384259382189,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476981248610684,0.571994910780128,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371606350251437,0.721346064882224,0.142283686696828,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0,0,0,0.729819156862664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.852548188666271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124149428591716,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233|short_description=p@chr12:32418225..32418236,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C682 | |||
|description=CAGE_peak_at_chr12:32418225..32418236,+ | |||
|id=chr12:32418225..32418236,+ | |||
|ontology_enrichment_celltype=CL:0000945!7.06e-57!24;CL:0000826!7.06e-57!24;CL:0000236!4.82e-41!14;CL:0000542!5.45e-32!53;CL:0000051!5.45e-32!53;CL:0000838!1.38e-28!52;CL:0000784!2.10e-22!3;CL:0000817!4.34e-22!3;CL:0000738!8.22e-17!140;CL:0002087!3.99e-16!119;CL:0000785!3.46e-15!2;CL:0000955!3.46e-15!2;CL:0000818!3.46e-15!2;CL:0000954!3.46e-15!2;CL:0000816!3.46e-15!2;CL:0000037!1.50e-14!172;CL:0000566!1.50e-14!172;CL:0000988!1.54e-13!182;CL:0002031!8.53e-12!124;CL:0002032!1.12e-10!165;CL:0000837!1.12e-10!165;CL:0000819!1.10e-08!1;CL:0000946!3.28e-08!1;CL:0000786!3.28e-08!1;CL:0000980!3.28e-08!1 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.68e-49;24!CL:0000236;7.59e-41;13!CL:0000542;1.04e-22;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.68e-49,24;CL:0000826,1.68e-49,24;CL:0000236,5.45e-38,14;CL:0000838,3.32e-23,52;CL:0000542,8.88e-23,53;CL:0000051,8.88e-23,53;CL:0002087,1.15e-10,115;CL:0002031,3.06e-10,120;CL:0000738,4.36e-09,136;CL:0002032,9.83e-08,161;CL:0000837,9.83e-08,161;CL:0000037,2.00e-07,168;CL:0000988,4.60e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000051;1.04e-22;53 | |||
|ontology_enrichment_disease=DOID:0060058!3.90e-12!10;DOID:0060073!1.10e-08!1;DOID:8675!1.10e-08!1;DOID:12603!1.71e-08!1;DOID:630!1.98e-08!1;DOID:0050177!1.98e-08!1;DOID:0050427!1.98e-08!1;DOID:2531!5.25e-08!51;DOID:0060083!5.25e-08!51 | |||
|ontology_enrichment_disease_v019=DOID:0060058;3.04e-14;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,3.04e-14,10 | |||
|ontology_enrichment_uberon=UBERON:0002106!4.82e-10!3;UBERON:0004854!4.82e-10!3;UBERON:0009034!4.82e-10!3;UBERON:0002095!4.82e-10!3;UBERON:0004782!4.82e-10!3;UBERON:0003281!4.82e-10!3;UBERON:0009664!4.82e-10!3;UBERON:0002296!4.82e-10!3;UBERON:0005602!4.82e-10!3;UBERON:0001179!4.82e-10!3;UBERON:0006293!4.82e-10!3;UBERON:0004177!2.27e-09!7;UBERON:0002372!2.84e-08!1;UBERON:0001961!2.84e-08!1;UBERON:0001744!2.84e-08!1;UBERON:0001735!2.84e-08!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,3.79589282843478,1.42169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,3.27683166757279,0.889509253863555,0,0,1.72425731986345,0,0,1.1384259382189,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476981248610684,0.571994910780128,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371606350251437,0.721346064882224,0.142283686696828,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0,0,0,0.729819156862664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.852548188666271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124149428591716,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |||
|short_description=p@chr12:32418225..32418236,+ | |||
}} |
Revision as of 22:29, 10 September 2013
Short description: | p@chr12:32418225..32418236, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:32418225..32418236, + |
Coexpression cluster: | C682_Burkitt_lymphoma_CD19_appendix_tonsil_spleen_diffuse |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.68e-49 | 24 |
pro-B cell | 1.68e-49 | 24 |
B cell | 5.45e-38 | 14 |
lymphoid lineage restricted progenitor cell | 3.32e-23 | 52 |
lymphocyte | 8.88e-23 | 53 |
common lymphoid progenitor | 8.88e-23 | 53 |
nongranular leukocyte | 1.15e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 3.06e-10 | 120 |
leukocyte | 4.36e-09 | 136 |
hematopoietic oligopotent progenitor cell | 9.83e-08 | 161 |
hematopoietic multipotent progenitor cell | 9.83e-08 | 161 |
hematopoietic stem cell | 2.00e-07 | 168 |
hematopoietic cell | 4.60e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 3.04e-14 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.