FFCP PHASE1:Hg19::chr12:12939901..12939915,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=S|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:12939901..12939915,-|id=chr12:12939901..12939915,-|ontology_enrichment_celltype=CL:0000066!1.07e-08!254;CL:0000220!3.17e-08!246;CL:0002321!3.61e-08!248;CL:0000213!1.35e-07!57;CL:0000215!1.35e-07!57;CL:0002139!2.21e-07!24;CL:0000222!7.14e-07!119|ontology_enrichment_celltype_v019=CL:0002596;8.72e-19;2|ontology_enrichment_celltype_v019_2=CL:0002596,8.40e-19,2;CL:0002569,9.69e-07,6|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000477!3.55e-07!286|ontology_enrichment_uberon_v019=UBERON:0005396;8.72e-19;2!UBERON:0000964;1.22e-09;4!UBERON:0010409;1.22e-09;4|ontology_enrichment_uberon_v019_2=UBERON:0005396,8.40e-19,2;UBERON:0000964,2.34e-09,4;UBERON:0010409,2.34e-09,4;UBERON:0004348,2.34e-09,4;UBERON:0005427,2.34e-09,4;UBERON:0003422,9.69e-07,6|phase1_expression=0.363356758541113,0.214100523890983,0.281908808191942,0,0,0,0,0,0.261185628199839,0.245733936501509,1.39560233594486,0,0.263766978228454,0,0,0,0,0,0,0.246242116153576,0.612002073732759,0.313454721478088,0.286235987131057,0.136874425072884,0,0.152826811495903,0.0821005894499457,0.236132343941038,0,0,0,0.919421224478927,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0.205601498999509,0,0,0,0,0.111410456885174,0.589211814949674,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0.383220493601921,0,0,0,0,0.950452044448374,0.602300476311091,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5905718941022,0.486634870302636,0.189069634328136,0.221729397462564,0.175669571386252,0.196468613246569,1.09288586487763,0.370784442784429,0,0,0,0,0,0,0.596287222100115,0,0.347140501607594,0.56530794192401,0,0.275118041940067,0.835979866147242,0.258416759169329,0.35576626268671,0.33472061276467,0,1.52054421143703,0.488124115096339,0.735326160691737,0,0.267899184852239,0.673588117878509,0.225222960966644,1.53316637465883,0.949265659568129,0.366403487860815,0,0,0,0,0,0.529636723252875,0,0,0.560677600142307,0,0,0,0.538842688278752,0.326923806226917,1.05950199351452,0,0.468642863667593,0,0.570471821544449,0.149448680551801,0,0.161872944368132,0,0.204154171254893,0.122834317311768,0.413303124703062,0,0.741800787835671,0,0.718618141816238,0.168336113954066,0.125118519871964,0,0,0.30648779579902,0.150238058906597,0.113432183160021,0.179389635688862,0.213557388818567,0.423863802319124,0,0.103052529238439,0.257640540045629,0,0,0.194874010322397,0,0.184099797284599,0.161646056818812,0,0.10075209822764,0,0.386521706326594,0.545492241181669,0.286804595389004,0.121973706129595,0,0.116193942869518,0.207322110030741,0.504641701751257,0,0,0.643240938192885,0,0,0,0.709840800239063,0.337169380156203,0,0.110293972732394,0.435758888184812,0.237270619111097,0.134831308160164,0,0.769494313892781,0,0,1.2347220339942,0,1.26755034821831,0,0,0,0.860919069801795,0,0.109750285408626,0,0,0,0,1.03993478527958,0,0,0.117408694235822,0.144366447761074,0,0.380508304469197,0.790204397959275,0,0,0,0.148631162288728,0,0,0.425325291727159,0.0895585227028483,0,0,0.492663237895943,0.088048434013226,0.207328115540772,0.144119953416961,0.25248486685276,0.126995788584338,0.381988425558278,1.17217447210047,0,0.616964956219941,0,0,0.336393253036082,0,0.22001485746285,0,0,0,0.26593811658487,0,0.257207374262142,0,0,0,1.62786481617433,0.823240336780769,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,1.14861935834114,0,0.434343920002738,0,0,0.112085143993527,0.197030760201927,0,0.256686072559497,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0,0,0.300946099727719,0,0,0,0.368738337083406,0.0868836144680828,0.391602314925481,1.71571711905428,0,0.215714200818617,0,0,0,0.907170879989041,0,0.153461973288062,0.280660094433074,0,0,0,0,0,0,0.164254312027618,0,0.116210378459959,1.0877350463246,0.40101294060657,0.0920809889358963,0.114814448164607,0,0.131124414959424,0.451199612907412,0,0,0,0.105551628892876,0,0.170093705276516,0,0,0.541892875087706,0.501689773854853,0.764628819135115,0.831076008928724,0.223874754722178,0,0,0,0,0.325378394664303,0,0.0915694648183434,0.41254749960294,0,0.650060246036521,0,0.386682873168488,0,0.307007349452259,0.137836572484531,0,0.145016693914229,0,0,0.330569830721956,0.192190067365106,0.255225424989168,0,0,0,0.6970372701606,0.308033580176089,0,1.73986598415015,0,0.286249773483982,0.372158369359667,0,0,0.255897791311334,0,1.27281299170375,2.35484592059769,0.359744915166629,0.274537029736055,0.117812402345686,0,0,0.421258456238981,0,0,0,0.409499734223957,0.282810863907425,0,0.551365343546124,0,1.31535265576129,0.578775534266688,0,0.202910376962704,0,0.563391205064483,0,0,0,0,0,0,0.379473173765715,0.3499347202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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=S | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:12939901..12939915,- | |||
|id=chr12:12939901..12939915,- | |||
|ontology_enrichment_celltype=CL:0000066!1.07e-08!254;CL:0000220!3.17e-08!246;CL:0002321!3.61e-08!248;CL:0000213!1.35e-07!57;CL:0000215!1.35e-07!57;CL:0002139!2.21e-07!24;CL:0000222!7.14e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0002596;8.72e-19;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002596,8.40e-19,2;CL:0002569,9.69e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000477!3.55e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0005396;8.72e-19;2!UBERON:0000964;1.22e-09;4!UBERON:0010409;1.22e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005396,8.40e-19,2;UBERON:0000964,2.34e-09,4;UBERON:0010409,2.34e-09,4;UBERON:0004348,2.34e-09,4;UBERON:0005427,2.34e-09,4;UBERON:0003422,9.69e-07,6 | |||
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| |||
|short_description=p@chr12:12939901..12939915,- | |||
}} |
Revision as of 21:43, 10 September 2013
Short description: | p@chr12:12939901..12939915, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:12939901..12939915, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the carotid artery | 8.40e-19 | 2 |
mesenchymal stem cell of umbilical cord | 9.69e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
carotid artery segment | 8.40e-19 | 2 |
cornea | 2.34e-09 | 4 |
eye surface | 2.34e-09 | 4 |
optic eminence | 2.34e-09 | 4 |
corneal primordium | 2.34e-09 | 4 |
mesenchyme of umbilical cord | 9.69e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.