FFCP PHASE1:Hg19::chr12:12605663..12605676,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C432|description=CAGE_peak_at_chr12:12605663..12605676,+|id=chr12:12605663..12605676,+|ontology_enrichment_celltype=CL:0002057!4.99e-63!42;CL:0000860!1.14e-58!45;CL:0002194!1.44e-45!63;CL:0000576!1.44e-45!63;CL:0000040!1.44e-45!63;CL:0000559!1.44e-45!63;CL:0002009!4.12e-44!65;CL:0000839!7.93e-41!70;CL:0000557!3.17e-40!71;CL:0000766!1.90e-37!76;CL:0002087!6.89e-29!119;CL:0000763!1.10e-24!112;CL:0000049!1.10e-24!112;CL:0000738!3.55e-24!140;CL:0002031!4.67e-22!124;CL:0000037!3.48e-19!172;CL:0000566!3.48e-19!172;CL:0000988!5.57e-18!182;CL:0002032!6.19e-16!165;CL:0000837!6.19e-16!165;CL:0000842!3.41e-13!3;CL:0000224!3.96e-10!4;CL:0000134!1.08e-07!358;CL:0002320!1.74e-07!365;CL:0000080!4.87e-07!6;CL:0000219!9.41e-07!390|ontology_enrichment_celltype_v019=CL:0000860;1.39e-63;33!CL:0002057;1.39e-63;33!CL:0000473;1.63e-45;39!CL:0000234;1.63e-45;39!CL:0000576;1.15e-25;48!CL:0000766;1.26e-19;69!CL:0002087;8.38e-14;104!CL:0000763;9.85e-13;100|ontology_enrichment_celltype_v019_2=CL:0000860,1.62e-55,42;CL:0002057,1.62e-55,42;CL:0000473,1.66e-48,48;CL:0000234,1.66e-48,48;CL:0002194,1.10e-38,59;CL:0000576,1.10e-38,59;CL:0000040,1.10e-38,59;CL:0000559,1.10e-38,59;CL:0002009,2.04e-37,61;CL:0000839,1.41e-34,66;CL:0000557,4.65e-34,67;CL:0000766,1.11e-31,72;CL:0000763,5.64e-21,108;CL:0000049,5.64e-21,108;CL:0002087,1.16e-19,115;CL:0002031,8.13e-19,120;CL:0000738,1.60e-16,136;CL:0002032,7.73e-14,161;CL:0000837,7.73e-14,161;CL:0000037,3.15e-13,168;CL:0000988,1.64e-12,177|ontology_enrichment_development_v019=CL:0002057;1.08e-36;42!CL:0000049;1.40e-07;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!1.80e-35!80;UBERON:0002390!4.20e-34!102;UBERON:0003061!4.20e-34!102;UBERON:0001474!7.59e-33!86;UBERON:0002193!7.59e-31!112;UBERON:0004765!1.24e-27!101;UBERON:0001434!1.24e-27!101;UBERON:0002405!5.62e-24!115;UBERON:0002204!1.03e-15!167;UBERON:0003081!1.04e-14!216;UBERON:0002384!3.34e-07!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.34e-30,76;UBERON:0001474,8.85e-28,82;UBERON:0004765,2.83e-25,90;UBERON:0002405,1.92e-24,93;UBERON:0002390,3.59e-23,98;UBERON:0003061,3.59e-23,98;UBERON:0001434,1.07e-22,100;UBERON:0002193,5.64e-21,108;UBERON:0002204,2.60e-13,167;UBERON:0003081,8.49e-11,203|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.822335776043652,0.309706370895104,0,0.768482119587302,0,3.7922024881028,10.973239620925,1.35426486594342,0.188242339542605,0,0.224723484445085,6.42776173978895,25.0324641119353,2.55734850319616,0,0,0,17.7027635563436,44.8234327506,4.9825779919646,0,0,0,13.9241885605675,58.1878664860352,8.22802207346299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr12:12605663..12605676,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C432 | |||
|description=CAGE_peak_at_chr12:12605663..12605676,+ | |||
|id=chr12:12605663..12605676,+ | |||
|ontology_enrichment_celltype=CL:0002057!4.99e-63!42;CL:0000860!1.14e-58!45;CL:0002194!1.44e-45!63;CL:0000576!1.44e-45!63;CL:0000040!1.44e-45!63;CL:0000559!1.44e-45!63;CL:0002009!4.12e-44!65;CL:0000839!7.93e-41!70;CL:0000557!3.17e-40!71;CL:0000766!1.90e-37!76;CL:0002087!6.89e-29!119;CL:0000763!1.10e-24!112;CL:0000049!1.10e-24!112;CL:0000738!3.55e-24!140;CL:0002031!4.67e-22!124;CL:0000037!3.48e-19!172;CL:0000566!3.48e-19!172;CL:0000988!5.57e-18!182;CL:0002032!6.19e-16!165;CL:0000837!6.19e-16!165;CL:0000842!3.41e-13!3;CL:0000224!3.96e-10!4;CL:0000134!1.08e-07!358;CL:0002320!1.74e-07!365;CL:0000080!4.87e-07!6;CL:0000219!9.41e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.39e-63;33!CL:0002057;1.39e-63;33!CL:0000473;1.63e-45;39!CL:0000234;1.63e-45;39!CL:0000576;1.15e-25;48!CL:0000766;1.26e-19;69!CL:0002087;8.38e-14;104!CL:0000763;9.85e-13;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.62e-55,42;CL:0002057,1.62e-55,42;CL:0000473,1.66e-48,48;CL:0000234,1.66e-48,48;CL:0002194,1.10e-38,59;CL:0000576,1.10e-38,59;CL:0000040,1.10e-38,59;CL:0000559,1.10e-38,59;CL:0002009,2.04e-37,61;CL:0000839,1.41e-34,66;CL:0000557,4.65e-34,67;CL:0000766,1.11e-31,72;CL:0000763,5.64e-21,108;CL:0000049,5.64e-21,108;CL:0002087,1.16e-19,115;CL:0002031,8.13e-19,120;CL:0000738,1.60e-16,136;CL:0002032,7.73e-14,161;CL:0000837,7.73e-14,161;CL:0000037,3.15e-13,168;CL:0000988,1.64e-12,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.08e-36;42!CL:0000049;1.40e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.80e-35!80;UBERON:0002390!4.20e-34!102;UBERON:0003061!4.20e-34!102;UBERON:0001474!7.59e-33!86;UBERON:0002193!7.59e-31!112;UBERON:0004765!1.24e-27!101;UBERON:0001434!1.24e-27!101;UBERON:0002405!5.62e-24!115;UBERON:0002204!1.03e-15!167;UBERON:0003081!1.04e-14!216;UBERON:0002384!3.34e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.34e-30,76;UBERON:0001474,8.85e-28,82;UBERON:0004765,2.83e-25,90;UBERON:0002405,1.92e-24,93;UBERON:0002390,3.59e-23,98;UBERON:0003061,3.59e-23,98;UBERON:0001434,1.07e-22,100;UBERON:0002193,5.64e-21,108;UBERON:0002204,2.60e-13,167;UBERON:0003081,8.49e-11,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.822335776043652,0.309706370895104,0,0.768482119587302,0,3.7922024881028,10.973239620925,1.35426486594342,0.188242339542605,0,0.224723484445085,6.42776173978895,25.0324641119353,2.55734850319616,0,0,0,17.7027635563436,44.8234327506,4.9825779919646,0,0,0,13.9241885605675,58.1878664860352,8.22802207346299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:12605663..12605676,+ | |||
}} |
Revision as of 21:38, 10 September 2013
Short description: | p@chr12:12605663..12605676, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:12605663..12605676, + |
Coexpression cluster: | C432_CD14_choriocarcinoma_Peripheral_CD34_Mast_Fibroblast_granulocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.62e-55 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.62e-55 | 42 |
defensive cell | 1.66e-48 | 48 |
phagocyte | 1.66e-48 | 48 |
monopoietic cell | 1.10e-38 | 59 |
monocyte | 1.10e-38 | 59 |
monoblast | 1.10e-38 | 59 |
promonocyte | 1.10e-38 | 59 |
macrophage dendritic cell progenitor | 2.04e-37 | 61 |
myeloid lineage restricted progenitor cell | 1.41e-34 | 66 |
granulocyte monocyte progenitor cell | 4.65e-34 | 67 |
myeloid leukocyte | 1.11e-31 | 72 |
myeloid cell | 5.64e-21 | 108 |
common myeloid progenitor | 5.64e-21 | 108 |
nongranular leukocyte | 1.16e-19 | 115 |
hematopoietic lineage restricted progenitor cell | 8.13e-19 | 120 |
leukocyte | 1.60e-16 | 136 |
hematopoietic oligopotent progenitor cell | 7.73e-14 | 161 |
hematopoietic multipotent progenitor cell | 7.73e-14 | 161 |
hematopoietic stem cell | 3.15e-13 | 168 |
hematopoietic cell | 1.64e-12 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.34e-30 | 76 |
bone element | 8.85e-28 | 82 |
skeletal element | 2.83e-25 | 90 |
immune system | 1.92e-24 | 93 |
hematopoietic system | 3.59e-23 | 98 |
blood island | 3.59e-23 | 98 |
skeletal system | 1.07e-22 | 100 |
hemolymphoid system | 5.64e-21 | 108 |
musculoskeletal system | 2.60e-13 | 167 |
lateral plate mesoderm | 8.49e-11 | 203 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.