FFCP PHASE1:Hg19::chr12:7068475..7068509,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5777|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9658|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000539029_5end|coexpression_cluster_id=C7|description=CAGE_peak_6_at_PTPN6_5end|id=chr12:7068475..7068509,+|ontology_enrichment_celltype=CL:0000037!8.82e-81!172;CL:0000566!8.82e-81!172;CL:0000988!5.32e-78!182;CL:0002032!2.69e-75!165;CL:0000837!2.69e-75!165;CL:0000738!4.83e-74!140;CL:0002087!1.32e-68!119;CL:0002031!3.30e-67!124;CL:0000542!1.16e-39!53;CL:0000051!1.16e-39!53;CL:0000838!6.53e-39!52;CL:0002057!1.16e-34!42;CL:0000763!4.93e-34!112;CL:0000049!4.93e-34!112;CL:0000860!3.14e-31!45;CL:0000766!1.10e-30!76;CL:0000557!5.10e-28!71;CL:0000839!1.62e-27!70;CL:0002194!1.24e-25!63;CL:0000576!1.24e-25!63;CL:0000040!1.24e-25!63;CL:0000559!1.24e-25!63;CL:0002009!1.86e-25!65;CL:0000945!1.65e-18!24;CL:0000826!1.65e-18!24;CL:0000084!2.20e-18!25;CL:0000827!2.20e-18!25;CL:0000134!3.39e-18!358;CL:0002320!4.55e-17!365;CL:0000791!1.75e-14!18;CL:0000789!1.75e-14!18;CL:0002420!1.75e-14!18;CL:0002419!1.75e-14!18;CL:0000790!1.75e-14!18;CL:0000219!3.41e-13!390;CL:0000236!4.21e-12!14;CL:0000048!1.71e-09!430;CL:0000625!2.60e-09!11;CL:0000034!6.30e-09!444;CL:0000723!6.94e-09!436;CL:0002393!2.50e-08!9;CL:0002397!2.50e-08!9|ontology_enrichment_celltype_v019=CL:0000860;3.55e-38;33!CL:0002057;3.55e-38;33!CL:0000576;1.46e-26;48!CL:0000473;6.62e-26;39!CL:0000234;6.62e-26;39!CL:0002087;1.25e-25;104!CL:0000542;1.28e-24;53!CL:0000945;4.02e-24;24!CL:0000766;1.11e-19;69!CL:0000738;1.67e-17;136!CL:0000084;9.59e-16;25!CL:0000236;1.95e-15;13!CL:0000988;1.92e-12;177!CL:0000791;6.76e-11;18!CL:0000789;6.76e-11;18!CL:0002419;6.76e-11;18!CL:0000763;2.95e-10;100!CL:0000219;1.83e-08;193|ontology_enrichment_celltype_v019_2=CL:0000738,3.26e-81,136;CL:0002087,1.11e-80,115;CL:0002031,3.27e-76,120;CL:0000037,2.56e-74,168;CL:0002032,9.74e-73,161;CL:0000837,9.74e-73,161;CL:0000988,2.86e-69,177;CL:0000860,1.62e-51,42;CL:0002057,1.62e-51,42;CL:0000542,2.61e-44,53;CL:0000051,2.61e-44,53;CL:0000473,1.57e-43,48;CL:0000234,1.57e-43,48;CL:0000838,4.19e-43,52;CL:0000766,2.24e-36,72;CL:0000839,9.86e-33,66;CL:0002194,2.11e-32,59;CL:0000576,2.11e-32,59;CL:0000040,2.11e-32,59;CL:0000559,2.11e-32,59;CL:0000557,4.59e-32,67;CL:0002009,5.67e-31,61;CL:0000763,3.98e-29,108;CL:0000049,3.98e-29,108;CL:0000945,3.82e-24,24;CL:0000826,3.82e-24,24;CL:0000134,3.35e-22,354;CL:0002320,2.69e-21,361;CL:0000219,3.99e-18,386;CL:0000236,3.88e-17,14;CL:0000084,7.99e-16,25;CL:0000827,7.99e-16,25;CL:0000034,2.61e-14,441;CL:0000048,2.78e-14,427;CL:0000723,9.31e-14,433;CL:0000791,6.18e-11,18;CL:0000789,6.18e-11,18;CL:0002420,6.18e-11,18;CL:0002419,6.18e-11,18;CL:0000790,6.18e-11,18;CL:0002393,1.14e-10,9;CL:0002397,1.14e-10,9|ontology_enrichment_development_v019=CL:0002057;4.36e-38;42!CL:0000051;1.28e-24;53!CL:0000790;6.76e-11;18!CL:0000049;2.15e-09;108|ontology_enrichment_disease=DOID:2531!4.51e-16!51;DOID:0060083!4.51e-16!51;DOID:1240!1.30e-14!39;DOID:8692!5.43e-09!31|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:2531,1.84e-07,51;DOID:0060083,1.84e-07,51|ontology_enrichment_uberon=UBERON:0002390!8.75e-37!102;UBERON:0003061!8.75e-37!102;UBERON:0002193!3.83e-33!112;UBERON:0002371!5.92e-25!80;UBERON:0001474!7.55e-22!86;UBERON:0002405!2.74e-20!115;UBERON:0004765!7.74e-16!101;UBERON:0001434!7.74e-16!101;UBERON:0002384!1.51e-15!375;UBERON:0003081!3.73e-11!216;UBERON:0000178!8.91e-08!15;UBERON:0000179!8.91e-08!15;UBERON:0000463!8.91e-08!15|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.43e-31,98;UBERON:0003061,2.43e-31,98;UBERON:0002371,1.73e-28,76;UBERON:0002193,4.39e-27,108;UBERON:0002405,1.66e-26,93;UBERON:0001474,1.64e-25,82;UBERON:0004765,3.58e-22,90;UBERON:0002384,4.57e-20,371;UBERON:0001434,9.00e-19,100;UBERON:0003081,9.63e-09,203;UBERON:0002204,5.54e-07,167|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.1232286128177,14.8602066904402,18.8118767339693,0.786728553697808,3.0706351847777,2.01260960310899,0,0.30120591877825,0,0,0.426507697462265,0.293600439334847,0.553995408531877,2.00544447470142,2.82114131930607,0,0.32389366601898,0,0.145398238779565,1.51150377475524,1.69808842831471,4.18372266430232,6.57868620834921,13.3173739484895,12.3707728698525,10.246428261164,16.553756092201,3.44745680736619,3.87290810150296,9.47985406160392,1.88242339542605,2.72906150057846,4.94391665779186,2.44867113896722,3.20929027076094,2.55734850319616,2.30895910130701,4.18873681005427,5.96714650745772,1.16083695451434,3.97169657283798,2.4912889959823,20.0998932205395,13.037072960505,14.986030284653,3.02699751316684,4.05105399586321,3.48108626184973,1.69004229049553,1.27562579979026,1.25795187305026,0.22465726229299,0,0,2.28010194992999,3.18266683518544,1.46131323011707,3.51992488922645,2.73069305631066,0.889509253863555,1.70692089026603,4.00395987036012,3.4485146397269,3.96626923670917,4.77026877267682,5.12291672198504,4.11066032559657,3.0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5777 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9658 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000539029_5end | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_6_at_PTPN6_5end | |||
|id=chr12:7068475..7068509,+ | |||
|ontology_enrichment_celltype=CL:0000037!8.82e-81!172;CL:0000566!8.82e-81!172;CL:0000988!5.32e-78!182;CL:0002032!2.69e-75!165;CL:0000837!2.69e-75!165;CL:0000738!4.83e-74!140;CL:0002087!1.32e-68!119;CL:0002031!3.30e-67!124;CL:0000542!1.16e-39!53;CL:0000051!1.16e-39!53;CL:0000838!6.53e-39!52;CL:0002057!1.16e-34!42;CL:0000763!4.93e-34!112;CL:0000049!4.93e-34!112;CL:0000860!3.14e-31!45;CL:0000766!1.10e-30!76;CL:0000557!5.10e-28!71;CL:0000839!1.62e-27!70;CL:0002194!1.24e-25!63;CL:0000576!1.24e-25!63;CL:0000040!1.24e-25!63;CL:0000559!1.24e-25!63;CL:0002009!1.86e-25!65;CL:0000945!1.65e-18!24;CL:0000826!1.65e-18!24;CL:0000084!2.20e-18!25;CL:0000827!2.20e-18!25;CL:0000134!3.39e-18!358;CL:0002320!4.55e-17!365;CL:0000791!1.75e-14!18;CL:0000789!1.75e-14!18;CL:0002420!1.75e-14!18;CL:0002419!1.75e-14!18;CL:0000790!1.75e-14!18;CL:0000219!3.41e-13!390;CL:0000236!4.21e-12!14;CL:0000048!1.71e-09!430;CL:0000625!2.60e-09!11;CL:0000034!6.30e-09!444;CL:0000723!6.94e-09!436;CL:0002393!2.50e-08!9;CL:0002397!2.50e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.55e-38;33!CL:0002057;3.55e-38;33!CL:0000576;1.46e-26;48!CL:0000473;6.62e-26;39!CL:0000234;6.62e-26;39!CL:0002087;1.25e-25;104!CL:0000542;1.28e-24;53!CL:0000945;4.02e-24;24!CL:0000766;1.11e-19;69!CL:0000738;1.67e-17;136!CL:0000084;9.59e-16;25!CL:0000236;1.95e-15;13!CL:0000988;1.92e-12;177!CL:0000791;6.76e-11;18!CL:0000789;6.76e-11;18!CL:0002419;6.76e-11;18!CL:0000763;2.95e-10;100!CL:0000219;1.83e-08;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.26e-81,136;CL:0002087,1.11e-80,115;CL:0002031,3.27e-76,120;CL:0000037,2.56e-74,168;CL:0002032,9.74e-73,161;CL:0000837,9.74e-73,161;CL:0000988,2.86e-69,177;CL:0000860,1.62e-51,42;CL:0002057,1.62e-51,42;CL:0000542,2.61e-44,53;CL:0000051,2.61e-44,53;CL:0000473,1.57e-43,48;CL:0000234,1.57e-43,48;CL:0000838,4.19e-43,52;CL:0000766,2.24e-36,72;CL:0000839,9.86e-33,66;CL:0002194,2.11e-32,59;CL:0000576,2.11e-32,59;CL:0000040,2.11e-32,59;CL:0000559,2.11e-32,59;CL:0000557,4.59e-32,67;CL:0002009,5.67e-31,61;CL:0000763,3.98e-29,108;CL:0000049,3.98e-29,108;CL:0000945,3.82e-24,24;CL:0000826,3.82e-24,24;CL:0000134,3.35e-22,354;CL:0002320,2.69e-21,361;CL:0000219,3.99e-18,386;CL:0000236,3.88e-17,14;CL:0000084,7.99e-16,25;CL:0000827,7.99e-16,25;CL:0000034,2.61e-14,441;CL:0000048,2.78e-14,427;CL:0000723,9.31e-14,433;CL:0000791,6.18e-11,18;CL:0000789,6.18e-11,18;CL:0002420,6.18e-11,18;CL:0002419,6.18e-11,18;CL:0000790,6.18e-11,18;CL:0002393,1.14e-10,9;CL:0002397,1.14e-10,9 | |||
|ontology_enrichment_development_v019=CL:0002057;4.36e-38;42!CL:0000051;1.28e-24;53!CL:0000790;6.76e-11;18!CL:0000049;2.15e-09;108 | |||
|ontology_enrichment_disease=DOID:2531!4.51e-16!51;DOID:0060083!4.51e-16!51;DOID:1240!1.30e-14!39;DOID:8692!5.43e-09!31 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.84e-07,51;DOID:0060083,1.84e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!8.75e-37!102;UBERON:0003061!8.75e-37!102;UBERON:0002193!3.83e-33!112;UBERON:0002371!5.92e-25!80;UBERON:0001474!7.55e-22!86;UBERON:0002405!2.74e-20!115;UBERON:0004765!7.74e-16!101;UBERON:0001434!7.74e-16!101;UBERON:0002384!1.51e-15!375;UBERON:0003081!3.73e-11!216;UBERON:0000178!8.91e-08!15;UBERON:0000179!8.91e-08!15;UBERON:0000463!8.91e-08!15 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.43e-31,98;UBERON:0003061,2.43e-31,98;UBERON:0002371,1.73e-28,76;UBERON:0002193,4.39e-27,108;UBERON:0002405,1.66e-26,93;UBERON:0001474,1.64e-25,82;UBERON:0004765,3.58e-22,90;UBERON:0002384,4.57e-20,371;UBERON:0001434,9.00e-19,100;UBERON:0003081,9.63e-09,203;UBERON:0002204,5.54e-07,167 | |||
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| |||
|short_description=p6@PTPN6 | |||
}} |
Revision as of 00:17, 11 September 2013
Short description: | p6@PTPN6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_PTPN6_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 0bp_to_ENST00000539029_5end |
EntrezGene: | PTPN6 |
HGNC: | 9658 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.43e-31 | 98 |
blood island | 2.43e-31 | 98 |
bone marrow | 1.73e-28 | 76 |
hemolymphoid system | 4.39e-27 | 108 |
immune system | 1.66e-26 | 93 |
bone element | 1.64e-25 | 82 |
skeletal element | 3.58e-22 | 90 |
connective tissue | 4.57e-20 | 371 |
skeletal system | 9.00e-19 | 100 |
lateral plate mesoderm | 9.63e-09 | 203 |
musculoskeletal system | 5.54e-07 | 167 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.84e-07 | 51 |
immune system cancer | 1.84e-07 | 51 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.