FFCP PHASE1:Hg19::chr12:6804456..6804460,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=196500|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=25338|TSSclassifier=N|UniProt=|association_with_transcript=-447bp_to_AL831874_5end|coexpression_cluster_id=C1173|description=CAGE_peak_13_at_C12orf53_5end|id=chr12:6804456..6804460,-|ontology_enrichment_celltype=CL:0002319!5.20e-09!25;CL:0000133!6.61e-08!59;CL:0000095!1.05e-07!17;CL:0000123!1.05e-07!17;CL:0000243!3.38e-07!15;CL:0000125!3.38e-07!15;CL:0000030!3.38e-07!15;CL:0000339!3.38e-07!15;CL:0000333!6.36e-07!41|ontology_enrichment_celltype_v019=CL:0000540;6.13e-08;6!CL:0000404;6.13e-08;6|ontology_enrichment_celltype_v019_2=CL:0000540,5.92e-08,6;CL:0000031,5.92e-08,6;CL:0000404,5.92e-08,6|ontology_enrichment_development_v019=UBERON:0006215;1.96e-14;3!CL:0000031;6.13e-08;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0060084;1.96e-14;3!DOID:127;1.96e-14;3!DOID:0060072;3.60e-11;4|ontology_enrichment_disease_v019_2=DOID:0060084,2.09e-14,3;DOID:127,2.09e-14,3;DOID:0060072,3.79e-11,4|ontology_enrichment_uberon=UBERON:0000073!6.51e-30!94;UBERON:0001016!6.51e-30!94;UBERON:0005743!1.42e-27!86;UBERON:0002780!2.93e-27!41;UBERON:0001890!2.93e-27!41;UBERON:0006240!2.93e-27!41;UBERON:0001893!1.09e-26!34;UBERON:0001869!1.59e-26!32;UBERON:0003080!2.00e-26!42;UBERON:0001017!2.84e-26!82;UBERON:0000955!9.75e-26!69;UBERON:0006238!9.75e-26!69;UBERON:0002791!3.88e-25!33;UBERON:0001049!2.06e-24!57;UBERON:0005068!2.06e-24!57;UBERON:0006241!2.06e-24!57;UBERON:0007135!2.06e-24!57;UBERON:0002020!2.63e-24!34;UBERON:0003528!2.63e-24!34;UBERON:0003056!2.29e-23!61;UBERON:0002616!2.81e-23!59;UBERON:0002346!1.06e-21!90;UBERON:0003075!1.28e-21!86;UBERON:0007284!1.28e-21!86;UBERON:0000956!3.66e-21!25;UBERON:0000203!3.66e-21!25;UBERON:0000033!1.95e-17!123;UBERON:0002619!8.99e-17!22;UBERON:0000924!3.39e-16!173;UBERON:0006601!3.39e-16!173;UBERON:0001950!4.18e-16!20;UBERON:0000153!4.50e-16!129;UBERON:0007811!4.50e-16!129;UBERON:0004121!6.96e-16!169;UBERON:0000200!1.49e-08!6;UBERON:0007023!1.44e-07!115;UBERON:0001872!4.17e-07!5;UBERON:0002771!6.06e-07!3|ontology_enrichment_uberon_v019=UBERON:0002771;3.11e-21;2!UBERON:0002346;2.94e-11;4!UBERON:0000923;2.94e-11;4!UBERON:0010316;2.94e-11;4!UBERON:0005291;2.94e-11;4!UBERON:0002050;2.86e-09;5!UBERON:0005423;2.86e-09;5!UBERON:0000200;5.54e-08;6!UBERON:0002037;7.01e-08;6!UBERON:0001871;5.08e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0002771,3.11e-21,2;UBERON:0000200,5.54e-08,6;UBERON:0002037,6.78e-08,6;UBERON:0006215,6.78e-08,6;UBERON:0001871,5.08e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408001382488506,0,0.572471974262113,0.136874425072884,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0.179389635688862,0.213557388818567,0,0,0,0,0.37223371266318,0,0,0,0.0920498986422993,0.323292113637624,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0.502548796003046,2.55175500661265,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0.173767228936166,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0.170453254832202,0,0,0,0,0,0.929691098594572,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242721043499027,0,0,0,0,0,0,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0.291604613383254,0.868124974666461,0,0.723578631752448,0,1.10579259931225,0.591095237907095,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677942222341597,0,0,0.253243183823515,0,0,0,0,0,0.229073192331831,0,0,0,0,0.135904206073614,0.104602846312333,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.681017030557878,0,0,0,0,0,0.485996453264197,0,0,0.0524545881349981,0,0,0,0,0,0,1.08599920350743,0,0,0,0,0.340776043570843,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.00307686098049,0.751145584238999,0,0,0,0.4150459048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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=196500 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=25338 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-447bp_to_AL831874_5end | |||
|coexpression_cluster_id=C1173 | |||
|description=CAGE_peak_13_at_C12orf53_5end | |||
|id=chr12:6804456..6804460,- | |||
|ontology_enrichment_celltype=CL:0002319!5.20e-09!25;CL:0000133!6.61e-08!59;CL:0000095!1.05e-07!17;CL:0000123!1.05e-07!17;CL:0000243!3.38e-07!15;CL:0000125!3.38e-07!15;CL:0000030!3.38e-07!15;CL:0000339!3.38e-07!15;CL:0000333!6.36e-07!41 | |||
|ontology_enrichment_celltype_v019=CL:0000540;6.13e-08;6!CL:0000404;6.13e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,5.92e-08,6;CL:0000031,5.92e-08,6;CL:0000404,5.92e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.96e-14;3!CL:0000031;6.13e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;1.96e-14;3!DOID:127;1.96e-14;3!DOID:0060072;3.60e-11;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,2.09e-14,3;DOID:127,2.09e-14,3;DOID:0060072,3.79e-11,4 | |||
|ontology_enrichment_uberon=UBERON:0000073!6.51e-30!94;UBERON:0001016!6.51e-30!94;UBERON:0005743!1.42e-27!86;UBERON:0002780!2.93e-27!41;UBERON:0001890!2.93e-27!41;UBERON:0006240!2.93e-27!41;UBERON:0001893!1.09e-26!34;UBERON:0001869!1.59e-26!32;UBERON:0003080!2.00e-26!42;UBERON:0001017!2.84e-26!82;UBERON:0000955!9.75e-26!69;UBERON:0006238!9.75e-26!69;UBERON:0002791!3.88e-25!33;UBERON:0001049!2.06e-24!57;UBERON:0005068!2.06e-24!57;UBERON:0006241!2.06e-24!57;UBERON:0007135!2.06e-24!57;UBERON:0002020!2.63e-24!34;UBERON:0003528!2.63e-24!34;UBERON:0003056!2.29e-23!61;UBERON:0002616!2.81e-23!59;UBERON:0002346!1.06e-21!90;UBERON:0003075!1.28e-21!86;UBERON:0007284!1.28e-21!86;UBERON:0000956!3.66e-21!25;UBERON:0000203!3.66e-21!25;UBERON:0000033!1.95e-17!123;UBERON:0002619!8.99e-17!22;UBERON:0000924!3.39e-16!173;UBERON:0006601!3.39e-16!173;UBERON:0001950!4.18e-16!20;UBERON:0000153!4.50e-16!129;UBERON:0007811!4.50e-16!129;UBERON:0004121!6.96e-16!169;UBERON:0000200!1.49e-08!6;UBERON:0007023!1.44e-07!115;UBERON:0001872!4.17e-07!5;UBERON:0002771!6.06e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002771;3.11e-21;2!UBERON:0002346;2.94e-11;4!UBERON:0000923;2.94e-11;4!UBERON:0010316;2.94e-11;4!UBERON:0005291;2.94e-11;4!UBERON:0002050;2.86e-09;5!UBERON:0005423;2.86e-09;5!UBERON:0000200;5.54e-08;6!UBERON:0002037;7.01e-08;6!UBERON:0001871;5.08e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002771,3.11e-21,2;UBERON:0000200,5.54e-08,6;UBERON:0002037,6.78e-08,6;UBERON:0006215,6.78e-08,6;UBERON:0001871,5.08e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408001382488506,0,0.572471974262113,0.136874425072884,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0.179389635688862,0.213557388818567,0,0,0,0,0.37223371266318,0,0,0,0.0920498986422993,0.323292113637624,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0.502548796003046,2.55175500661265,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0.173767228936166,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0.170453254832202,0,0,0,0,0,0.929691098594572,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242721043499027,0,0,0,0,0,0,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0.291604613383254,0.868124974666461,0,0.723578631752448,0,1.10579259931225,0.591095237907095,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677942222341597,0,0,0.253243183823515,0,0,0,0,0,0.229073192331831,0,0,0,0,0.135904206073614,0.104602846312333,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.681017030557878,0,0,0,0,0,0.485996453264197,0,0,0.0524545881349981,0,0,0,0,0,0,1.08599920350743,0,0,0,0,0.340776043570843,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.00307686098049,0.751145584238999,0,0,0,0.415045904808692,0,0,0,0,0,0.144921028610825,0,0,0,0,0.251567901752575,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0.150257608997218,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358177682162975,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431299245586727,0.157265941855896,0.982886743728125,0,2.33832412111851,0,0,0,0.0788617450012534,0,0.352675943690684,0,0.128458450192919,0,0.159633859057151,0,0.504143392443436,0.276629009856872,0.161475645631851,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0.405225507710368,0,0.826747186004736,0.443910671357348,0.546974809018219,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0.328863867814245,0.118193840883968,0,0,0.471346769748006,0,0,0.215927591218621,0,0.0714765441766563,0.158013611732727,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0.994753875806841,0,0,0.109940516745429,0,0,0.218559560503957,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0.679914901909147,0.872701380680755,0,0,0,0,0,0.109265571963696,0.253397002022874,0,0.26721740526556,0,0,0,0,0,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p13@C12orf53 | |||
}} |
Revision as of 00:03, 11 September 2013
Short description: | p13@C12orf53 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_C12orf53_5end |
Coexpression cluster: | C1173_medial_Neurons_parietal_temporal_medulloblastoma_occipital_duodenum |
Association with transcript: | -447bp_to_AL831874_5end |
EntrezGene: | C12orf53 |
HGNC: | 25338 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 5.92e-08 | 6 |
neuroblast | 5.92e-08 | 6 |
electrically signaling cell | 5.92e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
middle temporal gyrus | 3.11e-21 | 2 |
gyrus | 5.54e-08 | 6 |
cerebellum | 6.78e-08 | 6 |
rhombic lip | 6.78e-08 | 6 |
temporal lobe | 5.08e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 2.09e-14 | 3 |
leiomyoma | 2.09e-14 | 3 |
benign neoplasm | 3.79e-11 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.