FFCP PHASE1:Hg19::chr11:123989348..123989375,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C12|description=CAGE_peak_at_chr11:123989348..123989375,+|id=chr11:123989348..123989375,+|ontology_enrichment_celltype=CL:0002274!5.58e-11!5;CL:0000457!5.58e-11!5;CL:0002191!5.58e-11!5;CL:0000097!5.58e-11!5;CL:0000831!5.58e-11!5;CL:0002028!5.58e-11!5|ontology_enrichment_celltype_v019=CL:0000097;9.01e-126;5!CL:0000163;2.16e-70;9!CL:0000151;3.73e-18;36!CL:0002537;3.49e-09;5|ontology_enrichment_celltype_v019_2=CL:0000097,9.01e-126,5;CL:0002028,9.01e-126,5;CL:0000163,2.16e-70,9;CL:0000151,2.74e-18,36;CL:0000839,3.69e-10,66;CL:0000557,5.09e-10,67;CL:0000766,2.24e-09,72;CL:0002537,3.49e-09,5|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0000305;6.39e-07;7|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.37e-09,76;UBERON:0001474,2.54e-08,82;UBERON:0004765,1.22e-07,90;UBERON:0002405,2.04e-07,93;UBERON:0002390,4.54e-07,98;UBERON:0003061,4.54e-07,98;UBERON:0001434,6.11e-07,100;UBERON:0000305,6.39e-07,7|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0.218441372130172,0,0.123766352960047,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0.223915474239924,0.647787332037959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0.364295288292542,0,0,0.174129737299267,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0.265059536642971,0,0,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0.241011029883482,0,0,0,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0.492663237895943,3.69803422855549,7.25648404392702,4.32359860250884,5.6809095041871,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0.542621605391443,0,0,0,0,0.602878754119172,0,0,0,0,0,0,0,0,0,0.410952645100767,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0.300946099727719,0,0,0,0,0,0.195801157462741,0,0,0,0,0.606255142892519,0,0,0,0,0,0.128139149255701,0,0,0,0,0.177561725313127,0,0,0,0,0.200506470303285,0,0,0.182091168006717,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0,0,0.574265537996172,0,0,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,0,0.192190067365106,0,0,0,0,0,0.616067160352178,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0.202182481573316,0,0,0.48763373908959,0,0,0.272999822815972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633322905892992,0.329294892959902,0,0,0.0962221127255121,0,0,0.376575203107117,0.43050537267123,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0,1.18785872333055,0.614321404198464,0.994147647766298,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0.219385397153973,0,0,0.153900517007594,0,0,0,0,0,0.0915975934018623,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0.19351266257817,0,0.246346371159628,0.387956065953678,0,0.225980740780532,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.129282956361551,0,0,0,0.213574825135389,0.314408610199332,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378806010550178,0.251567901752575,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0.314531883711793,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0.227662191351298,0.177404740325278,0.115233987555779,0,0.0679697329768317,0,0,0,0.39246546425257,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0.385870790539723,0,0.470317296361523,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0.530450887527676,0,0,0,0,0,0.0645889098360061,0,0,0,0.202117188958219,0,0.342233301085281,0.202056159043763,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr11:123989348..123989375,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_at_chr11:123989348..123989375,+ | |||
|id=chr11:123989348..123989375,+ | |||
|ontology_enrichment_celltype=CL:0002274!5.58e-11!5;CL:0000457!5.58e-11!5;CL:0002191!5.58e-11!5;CL:0000097!5.58e-11!5;CL:0000831!5.58e-11!5;CL:0002028!5.58e-11!5 | |||
|ontology_enrichment_celltype_v019=CL:0000097;9.01e-126;5!CL:0000163;2.16e-70;9!CL:0000151;3.73e-18;36!CL:0002537;3.49e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,9.01e-126,5;CL:0002028,9.01e-126,5;CL:0000163,2.16e-70,9;CL:0000151,2.74e-18,36;CL:0000839,3.69e-10,66;CL:0000557,5.09e-10,67;CL:0000766,2.24e-09,72;CL:0002537,3.49e-09,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000305;6.39e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.37e-09,76;UBERON:0001474,2.54e-08,82;UBERON:0004765,1.22e-07,90;UBERON:0002405,2.04e-07,93;UBERON:0002390,4.54e-07,98;UBERON:0003061,4.54e-07,98;UBERON:0001434,6.11e-07,100;UBERON:0000305,6.39e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0.218441372130172,0,0.123766352960047,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0.223915474239924,0.647787332037959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0.364295288292542,0,0,0.174129737299267,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0.265059536642971,0,0,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0.241011029883482,0,0,0,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0.492663237895943,3.69803422855549,7.25648404392702,4.32359860250884,5.6809095041871,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0.542621605391443,0,0,0,0,0.602878754119172,0,0,0,0,0,0,0,0,0,0.410952645100767,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0.300946099727719,0,0,0,0,0,0.195801157462741,0,0,0,0,0.606255142892519,0,0,0,0,0,0.128139149255701,0,0,0,0,0.177561725313127,0,0,0,0,0.200506470303285,0,0,0.182091168006717,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0,0,0.574265537996172,0,0,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,0,0.192190067365106,0,0,0,0,0,0.616067160352178,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0.202182481573316,0,0,0.48763373908959,0,0,0.272999822815972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633322905892992,0.329294892959902,0,0,0.0962221127255121,0,0,0.376575203107117,0.43050537267123,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0,1.18785872333055,0.614321404198464,0.994147647766298,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0.219385397153973,0,0,0.153900517007594,0,0,0,0,0,0.0915975934018623,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0.19351266257817,0,0.246346371159628,0.387956065953678,0,0.225980740780532,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.129282956361551,0,0,0,0.213574825135389,0.314408610199332,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378806010550178,0.251567901752575,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0.314531883711793,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0.227662191351298,0.177404740325278,0.115233987555779,0,0.0679697329768317,0,0,0,0.39246546425257,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0.385870790539723,0,0.470317296361523,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0.530450887527676,0,0,0,0,0,0.0645889098360061,0,0,0,0.202117188958219,0,0.342233301085281,0.202056159043763,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:123989348..123989375,+ | |||
}} |
Revision as of 16:24, 10 September 2013
Short description: | p@chr11:123989348..123989375, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:123989348..123989375, + |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 9.01e-126 | 5 |
basophil mast progenitor cell | 9.01e-126 | 5 |
endocrine cell | 2.16e-70 | 9 |
secretory cell | 2.74e-18 | 36 |
myeloid lineage restricted progenitor cell | 3.69e-10 | 66 |
granulocyte monocyte progenitor cell | 5.09e-10 | 67 |
myeloid leukocyte | 2.24e-09 | 72 |
amnion mesenchymal stem cell | 3.49e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.37e-09 | 76 |
bone element | 2.54e-08 | 82 |
skeletal element | 1.22e-07 | 90 |
immune system | 2.04e-07 | 93 |
hematopoietic system | 4.54e-07 | 98 |
blood island | 4.54e-07 | 98 |
skeletal system | 6.11e-07 | 100 |
amnion | 6.39e-07 | 7 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.