FFCP PHASE1:Hg19::chr11:121461068..121461086,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6653|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11185|TSSclassifier=S|UniProt=E9PKB0|association_with_transcript=-41bp_to_ENST00000527934,uc010rzq.1_5end|coexpression_cluster_id=C65|description=CAGE_peak_13_at_SORL1_5end|id=chr11:121461068..121461086,+|ontology_enrichment_celltype=CL:0002057!4.21e-77!42;CL:0000860!3.39e-71!45;CL:0002194!4.92e-58!63;CL:0000576!4.92e-58!63;CL:0000040!4.92e-58!63;CL:0000559!4.92e-58!63;CL:0002009!6.68e-56!65;CL:0000766!3.61e-54!76;CL:0000557!5.70e-53!71;CL:0000839!4.25e-51!70;CL:0002087!8.48e-49!119;CL:0000738!6.21e-45!140;CL:0000037!1.09e-41!172;CL:0000566!1.09e-41!172;CL:0002031!1.44e-40!124;CL:0000763!3.04e-40!112;CL:0000049!3.04e-40!112;CL:0000988!1.62e-38!182;CL:0002032!1.44e-37!165;CL:0000837!1.44e-37!165;CL:0000134!1.59e-12!358;CL:0002320!5.48e-12!365;CL:0000219!4.12e-10!390;CL:0002393!9.76e-09!9;CL:0002397!9.76e-09!9;CL:0000767!2.72e-08!3;CL:0000048!6.65e-08!430;CL:0000034!1.04e-07!444;CL:0000723!1.36e-07!436;CL:0000842!1.69e-07!3|ontology_enrichment_celltype_v019=CL:0000860;9.37e-112;33!CL:0002057;9.37e-112;33!CL:0000473;2.38e-82;39!CL:0000234;2.38e-82;39!CL:0000576;1.56e-56;48!CL:0000766;8.94e-35;69!CL:0002087;5.10e-20;104!CL:0000763;1.55e-19;100!CL:0000767;9.26e-14;3!CL:0000738;1.79e-12;136!CL:0000988;6.42e-08;177|ontology_enrichment_celltype_v019_2=CL:0000860,6.06e-108,42;CL:0002057,6.06e-108,42;CL:0000473,1.77e-99,48;CL:0000234,1.77e-99,48;CL:0002194,3.79e-78,59;CL:0000576,3.79e-78,59;CL:0000040,3.79e-78,59;CL:0000559,3.79e-78,59;CL:0000766,1.71e-75,72;CL:0002009,2.15e-75,61;CL:0000557,2.14e-72,67;CL:0000839,3.13e-69,66;CL:0000763,5.66e-54,108;CL:0000049,5.66e-54,108;CL:0002087,2.60e-53,115;CL:0000738,7.85e-52,136;CL:0002031,8.72e-51,120;CL:0002032,2.65e-47,161;CL:0000837,2.65e-47,161;CL:0000037,5.18e-45,168;CL:0000988,2.49e-42,177;CL:0000134,3.84e-17,354;CL:0002320,1.20e-16,361;CL:0000219,6.51e-15,386;CL:0000767,7.92e-14,3;CL:0000048,8.70e-13,427;CL:0000723,1.71e-12,433;CL:0000034,4.10e-12,441|ontology_enrichment_development_v019=CL:0002057;1.45e-78;42!CL:0000049;5.05e-18;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!4.05e-48!80;UBERON:0001474!6.33e-44!86;UBERON:0002390!8.19e-43!102;UBERON:0003061!8.19e-43!102;UBERON:0002193!7.82e-38!112;UBERON:0004765!1.30e-35!101;UBERON:0001434!1.30e-35!101;UBERON:0002405!2.34e-31!115;UBERON:0002204!7.24e-17!167;UBERON:0003081!1.50e-13!216;UBERON:0002384!2.93e-11!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.46e-63,76;UBERON:0001474,5.49e-58,82;UBERON:0004765,3.05e-52,90;UBERON:0002405,2.44e-50,93;UBERON:0002390,2.01e-47,98;UBERON:0003061,2.01e-47,98;UBERON:0001434,2.44e-46,100;UBERON:0002193,2.14e-42,108;UBERON:0002204,6.73e-25,167;UBERON:0003081,3.44e-19,203;UBERON:0002384,5.62e-16,371;UBERON:0000926,9.32e-10,315;UBERON:0004120,9.32e-10,315;UBERON:0006603,9.32e-10,315|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06316195519468,3.03772180964799,2.20390187678302,1.96682138424452,1.53531759238885,4.4896675761662,0,0,0,0,0.995184627411951,0.587200878669695,1.10799081706375,1.00272223735071,0.217010870715852,0,0,0,11.341062624806,21.1610528465733,15.0402117936446,5.11343881192506,10.2791972005456,5.88442104700697,4.02769349251011,6.91633907628572,6.14853797710322,8.61864201841546,10.973239620925,4.06279459783025,14.8711448238658,20.1950551042806,18.8767726933871,18.977201326996,32.4138317346855,23.6554736545645,8.90598510504134,13.7629923758926,8.09827026012119,4.93355705668593,9.07816359505824,1.86846674698672,3.01498398308092,7.30076085788282,5.86409880703815,3.63239701580021,8.83866326370155,8.22802207346299,0.211255286311942,0.425208599930087,0.209658645508376,0.44931452458598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00451418286425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.862856803274467,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.957526850661834,0,1.62310970137278,0,0,0,0,0,0.321176150207399,0,0,0,0.307240764308458,0.447352215784832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96935688737711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404406797884062,0,0.468528891450678,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,1.27746588066972,0,2.10309883423452,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0.272406812223151,0,0,0,0,0,0.425246896606173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0.487170393523584,0,0,0,0,0,0,0,0,0,0,0,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0,0,0.207471757392654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0.806637912890455,0,0.135939465953663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0.143339583151451,0,0.203974470572744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.52625341533556|short_description=p13@SORL1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=6653 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11185 | |||
|TSSclassifier=S | |||
|UniProt=E9PKB0 | |||
|association_with_transcript=-41bp_to_ENST00000527934,uc010rzq.1_5end | |||
|coexpression_cluster_id=C65 | |||
|description=CAGE_peak_13_at_SORL1_5end | |||
|id=chr11:121461068..121461086,+ | |||
|ontology_enrichment_celltype=CL:0002057!4.21e-77!42;CL:0000860!3.39e-71!45;CL:0002194!4.92e-58!63;CL:0000576!4.92e-58!63;CL:0000040!4.92e-58!63;CL:0000559!4.92e-58!63;CL:0002009!6.68e-56!65;CL:0000766!3.61e-54!76;CL:0000557!5.70e-53!71;CL:0000839!4.25e-51!70;CL:0002087!8.48e-49!119;CL:0000738!6.21e-45!140;CL:0000037!1.09e-41!172;CL:0000566!1.09e-41!172;CL:0002031!1.44e-40!124;CL:0000763!3.04e-40!112;CL:0000049!3.04e-40!112;CL:0000988!1.62e-38!182;CL:0002032!1.44e-37!165;CL:0000837!1.44e-37!165;CL:0000134!1.59e-12!358;CL:0002320!5.48e-12!365;CL:0000219!4.12e-10!390;CL:0002393!9.76e-09!9;CL:0002397!9.76e-09!9;CL:0000767!2.72e-08!3;CL:0000048!6.65e-08!430;CL:0000034!1.04e-07!444;CL:0000723!1.36e-07!436;CL:0000842!1.69e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.37e-112;33!CL:0002057;9.37e-112;33!CL:0000473;2.38e-82;39!CL:0000234;2.38e-82;39!CL:0000576;1.56e-56;48!CL:0000766;8.94e-35;69!CL:0002087;5.10e-20;104!CL:0000763;1.55e-19;100!CL:0000767;9.26e-14;3!CL:0000738;1.79e-12;136!CL:0000988;6.42e-08;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.06e-108,42;CL:0002057,6.06e-108,42;CL:0000473,1.77e-99,48;CL:0000234,1.77e-99,48;CL:0002194,3.79e-78,59;CL:0000576,3.79e-78,59;CL:0000040,3.79e-78,59;CL:0000559,3.79e-78,59;CL:0000766,1.71e-75,72;CL:0002009,2.15e-75,61;CL:0000557,2.14e-72,67;CL:0000839,3.13e-69,66;CL:0000763,5.66e-54,108;CL:0000049,5.66e-54,108;CL:0002087,2.60e-53,115;CL:0000738,7.85e-52,136;CL:0002031,8.72e-51,120;CL:0002032,2.65e-47,161;CL:0000837,2.65e-47,161;CL:0000037,5.18e-45,168;CL:0000988,2.49e-42,177;CL:0000134,3.84e-17,354;CL:0002320,1.20e-16,361;CL:0000219,6.51e-15,386;CL:0000767,7.92e-14,3;CL:0000048,8.70e-13,427;CL:0000723,1.71e-12,433;CL:0000034,4.10e-12,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.45e-78;42!CL:0000049;5.05e-18;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.05e-48!80;UBERON:0001474!6.33e-44!86;UBERON:0002390!8.19e-43!102;UBERON:0003061!8.19e-43!102;UBERON:0002193!7.82e-38!112;UBERON:0004765!1.30e-35!101;UBERON:0001434!1.30e-35!101;UBERON:0002405!2.34e-31!115;UBERON:0002204!7.24e-17!167;UBERON:0003081!1.50e-13!216;UBERON:0002384!2.93e-11!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.46e-63,76;UBERON:0001474,5.49e-58,82;UBERON:0004765,3.05e-52,90;UBERON:0002405,2.44e-50,93;UBERON:0002390,2.01e-47,98;UBERON:0003061,2.01e-47,98;UBERON:0001434,2.44e-46,100;UBERON:0002193,2.14e-42,108;UBERON:0002204,6.73e-25,167;UBERON:0003081,3.44e-19,203;UBERON:0002384,5.62e-16,371;UBERON:0000926,9.32e-10,315;UBERON:0004120,9.32e-10,315;UBERON:0006603,9.32e-10,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06316195519468,3.03772180964799,2.20390187678302,1.96682138424452,1.53531759238885,4.4896675761662,0,0,0,0,0.995184627411951,0.587200878669695,1.10799081706375,1.00272223735071,0.217010870715852,0,0,0,11.341062624806,21.1610528465733,15.0402117936446,5.11343881192506,10.2791972005456,5.88442104700697,4.02769349251011,6.91633907628572,6.14853797710322,8.61864201841546,10.973239620925,4.06279459783025,14.8711448238658,20.1950551042806,18.8767726933871,18.977201326996,32.4138317346855,23.6554736545645,8.90598510504134,13.7629923758926,8.09827026012119,4.93355705668593,9.07816359505824,1.86846674698672,3.01498398308092,7.30076085788282,5.86409880703815,3.63239701580021,8.83866326370155,8.22802207346299,0.211255286311942,0.425208599930087,0.209658645508376,0.44931452458598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00451418286425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.862856803274467,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.957526850661834,0,1.62310970137278,0,0,0,0,0,0.321176150207399,0,0,0,0.307240764308458,0.447352215784832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96935688737711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404406797884062,0,0.468528891450678,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,1.27746588066972,0,2.10309883423452,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0.272406812223151,0,0,0,0,0,0.425246896606173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0.487170393523584,0,0,0,0,0,0,0,0,0,0,0,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0,0,0.207471757392654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0.806637912890455,0,0.135939465953663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0.143339583151451,0,0.203974470572744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.52625341533556 | |||
|short_description=p13@SORL1 | |||
}} |
Revision as of 16:15, 10 September 2013
Short description: | p13@SORL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_SORL1_5end |
Coexpression cluster: | C65_CD14_Eosinophils_Monocytederived_Basophils_immature_Macrophage_Neutrophils |
Association with transcript: | -41bp_to_ENST00000527934, uc010rzq.1_5end |
EntrezGene: | SORL1 |
HGNC: | 11185 |
UniProt: | E9PKB0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.06e-108 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.06e-108 | 42 |
defensive cell | 1.77e-99 | 48 |
phagocyte | 1.77e-99 | 48 |
monopoietic cell | 3.79e-78 | 59 |
monocyte | 3.79e-78 | 59 |
monoblast | 3.79e-78 | 59 |
promonocyte | 3.79e-78 | 59 |
myeloid leukocyte | 1.71e-75 | 72 |
macrophage dendritic cell progenitor | 2.15e-75 | 61 |
granulocyte monocyte progenitor cell | 2.14e-72 | 67 |
myeloid lineage restricted progenitor cell | 3.13e-69 | 66 |
myeloid cell | 5.66e-54 | 108 |
common myeloid progenitor | 5.66e-54 | 108 |
nongranular leukocyte | 2.60e-53 | 115 |
leukocyte | 7.85e-52 | 136 |
hematopoietic lineage restricted progenitor cell | 8.72e-51 | 120 |
hematopoietic oligopotent progenitor cell | 2.65e-47 | 161 |
hematopoietic multipotent progenitor cell | 2.65e-47 | 161 |
hematopoietic stem cell | 5.18e-45 | 168 |
hematopoietic cell | 2.49e-42 | 177 |
mesenchymal cell | 3.84e-17 | 354 |
connective tissue cell | 1.20e-16 | 361 |
motile cell | 6.51e-15 | 386 |
basophil | 7.92e-14 | 3 |
multi fate stem cell | 8.70e-13 | 427 |
somatic stem cell | 1.71e-12 | 433 |
stem cell | 4.10e-12 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.46e-63 | 76 |
bone element | 5.49e-58 | 82 |
skeletal element | 3.05e-52 | 90 |
immune system | 2.44e-50 | 93 |
hematopoietic system | 2.01e-47 | 98 |
blood island | 2.01e-47 | 98 |
skeletal system | 2.44e-46 | 100 |
hemolymphoid system | 2.14e-42 | 108 |
musculoskeletal system | 6.73e-25 | 167 |
lateral plate mesoderm | 3.44e-19 | 203 |
connective tissue | 5.62e-16 | 371 |
mesoderm | 9.32e-10 | 315 |
mesoderm-derived structure | 9.32e-10 | 315 |
presumptive mesoderm | 9.32e-10 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.