FFCP PHASE1:Hg19::chr11:118784664..118784677,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:118784664..118784677,-|id=chr11:118784664..118784677,-|ontology_enrichment_celltype=CL:0000066!6.67e-19!254|ontology_enrichment_celltype_v019=CL:0002252;2.88e-09;1!CL:0000244;7.28e-09;4!CL:0000731;7.28e-09;4|ontology_enrichment_celltype_v019_2=CL:0002252,3.83e-09,1;CL:0000244,4.16e-09,4;CL:0000731,4.16e-09,4;CL:0000066,5.27e-08,253|ontology_enrichment_development_v019=UBERON:0008801;7.96e-10;1!UBERON:0006298;2.88e-09;1|ontology_enrichment_disease=DOID:305!1.78e-13!106;DOID:0050687!9.91e-12!143;DOID:162!8.08e-08!235;DOID:14566!8.63e-08!239|ontology_enrichment_disease_v019=DOID:3493;3.37e-17;2!DOID:1749;2.14e-09;14!DOID:3111;2.88e-09;1!DOID:3603;2.88e-09;1|ontology_enrichment_disease_v019_2=DOID:3493,2.07e-17,2;DOID:3111,1.43e-09,1;DOID:3603,1.43e-09,1;DOID:1749,3.09e-09,14;DOID:305,7.89e-09,106|ontology_enrichment_uberon=UBERON:0004119!9.76e-11!169;UBERON:0000925!9.76e-11!169;UBERON:0006595!9.76e-11!169;UBERON:0001041!2.86e-09!98;UBERON:0001004!3.60e-09!72;UBERON:0005911!8.11e-09!82;UBERON:0001007!1.32e-08!155;UBERON:0001555!1.32e-08!155;UBERON:0007026!1.32e-08!155;UBERON:0000065!1.61e-08!53;UBERON:0000077!4.48e-08!130;UBERON:0004921!1.98e-07!129;UBERON:0004185!1.98e-07!129;UBERON:0005153!2.88e-07!37;UBERON:0008947!4.23e-07!38;UBERON:0003258!4.23e-07!38|ontology_enrichment_uberon_v019=UBERON:0001829;2.33e-17;2!UBERON:0001041;1.70e-14;14!UBERON:0001044;5.76e-13;6!UBERON:0003293;5.76e-13;6!UBERON:0003294;5.76e-13;6!UBERON:0010047;5.76e-13;6!UBERON:0003408;5.76e-13;6!UBERON:0000167;5.76e-13;6!UBERON:0001831;7.96e-10;1!UBERON:0001567;7.96e-10;1!UBERON:0004913;1.16e-09;1!UBERON:0003703;1.16e-09;1!UBERON:0001174;1.16e-09;1!UBERON:0004914;1.16e-09;1!UBERON:0001736;2.88e-09;1!UBERON:0002394;4.69e-09;4!UBERON:0003928;4.69e-09;4!UBERON:0004921;8.20e-08;33!UBERON:0000365;2.94e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0001829,2.25e-17,2;UBERON:0001044,5.66e-13,6;UBERON:0003293,5.66e-13,6;UBERON:0003294,5.66e-13,6;UBERON:0010047,5.66e-13,6;UBERON:0000167,5.66e-13,6;UBERON:0001831,7.98e-10,1;UBERON:0001567,7.98e-10,1;UBERON:0008801,7.98e-10,1;UBERON:0004913,1.32e-09,1;UBERON:0003703,1.32e-09,1;UBERON:0001174,1.32e-09,1;UBERON:0004914,1.32e-09,1;UBERON:0001736,2.77e-09,1;UBERON:0006298,2.77e-09,1;UBERON:0003408,5.59e-08,10;UBERON:0000365,1.88e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0.263766978228454,0,0,0,0,0,0.487932798790507,0,0,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0.90361775633475,0,0.852139206383318,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35426486594342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853460445133014,0.400395987036012,0,0,0,0,0,0.764546456250458,0,0,0,0,0.393010762749165,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45718115317017,0,0,0,0,0,0,0.371457501329565,0,0,0.347140501607594,0,0,0,0,0,0,0.66944122552934,0,0,0,0,0,0,0,0.225222960966644,0,0,0.183201743930407,0,0,1.3082821564276,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0.241011029883482,0.220587945464788,0,0.237270619111097,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0.768251997860379,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0.577465791044295,0.925971025153221,0,0,0,0,0,0,0,0,0.141775097242386,0.0895585227028483,0.871901815541886,0.766765358330422,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0.300343057843917,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0.195801157462741,0,0,0,0.213455115606889,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0.802025881213139,0.368323955743585,0,0,0,0,0.15403067420883,0.784349769176855,0,0,1.13733384070897,0,0,0,0,0,0.509752546090077,0,0,0,0,0,0.656029291399411,0.325378394664303,0,0,0,0,1.30012049207304,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0.638063562472921,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577332676353072,0,0,0,0.86101074534246,1.68471475667626,1.7737206141467,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0.146508179271894,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0.19924798825107,0,0,0.306806047506464,0,0,1.61763032065188,0.179021174675609,0,0,0,0,0,0,0,0,0,0,1.0241410345695,0.254253650292766,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,0,0,0,0,0,0.0915975934018623,0,0,0.156980256395025,0,0,0,0,0,0,0,0.32646561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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:118784664..118784677,- | |||
|id=chr11:118784664..118784677,- | |||
|ontology_enrichment_celltype=CL:0000066!6.67e-19!254 | |||
|ontology_enrichment_celltype_v019=CL:0002252;2.88e-09;1!CL:0000244;7.28e-09;4!CL:0000731;7.28e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002252,3.83e-09,1;CL:0000244,4.16e-09,4;CL:0000731,4.16e-09,4;CL:0000066,5.27e-08,253 | |||
|ontology_enrichment_development_v019=UBERON:0008801;7.96e-10;1!UBERON:0006298;2.88e-09;1 | |||
|ontology_enrichment_disease=DOID:305!1.78e-13!106;DOID:0050687!9.91e-12!143;DOID:162!8.08e-08!235;DOID:14566!8.63e-08!239 | |||
|ontology_enrichment_disease_v019=DOID:3493;3.37e-17;2!DOID:1749;2.14e-09;14!DOID:3111;2.88e-09;1!DOID:3603;2.88e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,2.07e-17,2;DOID:3111,1.43e-09,1;DOID:3603,1.43e-09,1;DOID:1749,3.09e-09,14;DOID:305,7.89e-09,106 | |||
|ontology_enrichment_uberon=UBERON:0004119!9.76e-11!169;UBERON:0000925!9.76e-11!169;UBERON:0006595!9.76e-11!169;UBERON:0001041!2.86e-09!98;UBERON:0001004!3.60e-09!72;UBERON:0005911!8.11e-09!82;UBERON:0001007!1.32e-08!155;UBERON:0001555!1.32e-08!155;UBERON:0007026!1.32e-08!155;UBERON:0000065!1.61e-08!53;UBERON:0000077!4.48e-08!130;UBERON:0004921!1.98e-07!129;UBERON:0004185!1.98e-07!129;UBERON:0005153!2.88e-07!37;UBERON:0008947!4.23e-07!38;UBERON:0003258!4.23e-07!38 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;2.33e-17;2!UBERON:0001041;1.70e-14;14!UBERON:0001044;5.76e-13;6!UBERON:0003293;5.76e-13;6!UBERON:0003294;5.76e-13;6!UBERON:0010047;5.76e-13;6!UBERON:0003408;5.76e-13;6!UBERON:0000167;5.76e-13;6!UBERON:0001831;7.96e-10;1!UBERON:0001567;7.96e-10;1!UBERON:0004913;1.16e-09;1!UBERON:0003703;1.16e-09;1!UBERON:0001174;1.16e-09;1!UBERON:0004914;1.16e-09;1!UBERON:0001736;2.88e-09;1!UBERON:0002394;4.69e-09;4!UBERON:0003928;4.69e-09;4!UBERON:0004921;8.20e-08;33!UBERON:0000365;2.94e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,2.25e-17,2;UBERON:0001044,5.66e-13,6;UBERON:0003293,5.66e-13,6;UBERON:0003294,5.66e-13,6;UBERON:0010047,5.66e-13,6;UBERON:0000167,5.66e-13,6;UBERON:0001831,7.98e-10,1;UBERON:0001567,7.98e-10,1;UBERON:0008801,7.98e-10,1;UBERON:0004913,1.32e-09,1;UBERON:0003703,1.32e-09,1;UBERON:0001174,1.32e-09,1;UBERON:0004914,1.32e-09,1;UBERON:0001736,2.77e-09,1;UBERON:0006298,2.77e-09,1;UBERON:0003408,5.59e-08,10;UBERON:0000365,1.88e-07,5 | |||
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|short_description=p@chr11:118784664..118784677,- | |||
}} |
Revision as of 16:05, 10 September 2013
Short description: | p@chr11:118784664..118784677, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:118784664..118784677, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of esophagus | 3.83e-09 | 1 |
transitional epithelial cell | 4.16e-09 | 4 |
urothelial cell | 4.16e-09 | 4 |
epithelial cell | 5.27e-08 | 253 |
Ontology term | p-value | n |
---|---|---|
major salivary gland | 2.25e-17 | 2 |
saliva-secreting gland | 5.66e-13 | 6 |
gland of oral region | 5.66e-13 | 6 |
gland of foregut | 5.66e-13 | 6 |
oral gland | 5.66e-13 | 6 |
oral cavity | 5.66e-13 | 6 |
parotid gland | 7.98e-10 | 1 |
cheek | 7.98e-10 | 1 |
parotid gland primordium | 7.98e-10 | 1 |
hepatopancreatic ampulla | 1.32e-09 | 1 |
extrahepatic bile duct | 1.32e-09 | 1 |
common bile duct | 1.32e-09 | 1 |
duodenal papilla | 1.32e-09 | 1 |
submandibular gland | 2.77e-09 | 1 |
submandibular gland primordium | 2.77e-09 | 1 |
gland of gut | 5.59e-08 | 10 |
urothelium | 1.88e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 2.07e-17 | 2 |
cystadenocarcinoma | 1.43e-09 | 1 |
mucinous cystadenocarcinoma | 1.43e-09 | 1 |
squamous cell carcinoma | 3.09e-09 | 14 |
carcinoma | 7.89e-09 | 106 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.