FFCP PHASE1:Hg19::chr11:117387379..117387405,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:117387379..117387405,-|id=chr11:117387379..117387405,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000047;2.74e-12;2|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0005425;3.67e-23;1!UBERON:0006238;6.10e-09;10!UBERON:0003056;1.26e-08;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!3.65e-56!57;UBERON:0005068!3.65e-56!57;UBERON:0006241!3.65e-56!57;UBERON:0007135!3.65e-56!57;UBERON:0001017!4.08e-54!82;UBERON:0005743!7.66e-54!86;UBERON:0000073!1.82e-50!94;UBERON:0001016!1.82e-50!94;UBERON:0000955!5.57e-50!69;UBERON:0006238!5.57e-50!69;UBERON:0002780!5.00e-48!41;UBERON:0001890!5.00e-48!41;UBERON:0006240!5.00e-48!41;UBERON:0002616!1.57e-47!59;UBERON:0003080!1.01e-46!42;UBERON:0001893!2.28e-42!34;UBERON:0002020!4.25e-42!34;UBERON:0003528!4.25e-42!34;UBERON:0003075!6.57e-41!86;UBERON:0007284!6.57e-41!86;UBERON:0002791!6.32e-40!33;UBERON:0002346!1.20e-38!90;UBERON:0001869!2.00e-37!32;UBERON:0007023!7.79e-36!115;UBERON:0003056!7.43e-35!61;UBERON:0002619!4.64e-33!22;UBERON:0001950!2.61e-32!20;UBERON:0000033!6.99e-29!123;UBERON:0000956!1.03e-28!25;UBERON:0000203!1.03e-28!25;UBERON:0000153!1.35e-28!129;UBERON:0007811!1.35e-28!129;UBERON:0004121!4.46e-26!169;UBERON:0000924!3.28e-25!173;UBERON:0006601!3.28e-25!173;UBERON:0001871!3.49e-18!7;UBERON:0002420!2.63e-15!9;UBERON:0007245!2.63e-15!9;UBERON:0010009!2.63e-15!9;UBERON:0010011!2.63e-15!9;UBERON:0000454!2.63e-15!9;UBERON:0002308!6.60e-15!9;UBERON:0000125!6.60e-15!9;UBERON:0000200!9.25e-13!6;UBERON:0000025!1.36e-12!194;UBERON:0002298!2.58e-12!8;UBERON:0003076!1.01e-10!15;UBERON:0003057!1.01e-10!15;UBERON:0002771!2.78e-10!3;UBERON:0009663!3.56e-10!7;UBERON:0004732!8.50e-10!13;UBERON:0000349!1.24e-09!5;UBERON:0001872!1.29e-09!5;UBERON:0006331!1.52e-09!3;UBERON:0002021!1.73e-09!5;UBERON:0000988!3.94e-09!3;UBERON:0000483!5.69e-09!309;UBERON:0000475!5.87e-09!365;UBERON:0000119!8.80e-09!312;UBERON:0004111!2.41e-08!241;UBERON:0000064!8.66e-08!219;UBERON:0004733!9.47e-08!12;UBERON:0002028!9.47e-08!12;UBERON:0007277!9.47e-08!12;UBERON:0005162!1.93e-07!2;UBERON:0000122!1.93e-07!2;UBERON:0001876!2.54e-07!2;UBERON:0001897!2.54e-07!2;UBERON:0001894!4.06e-07!7;UBERON:0006222!4.06e-07!7;UBERON:0000369!8.64e-07!4;UBERON:0002435!8.64e-07!4;UBERON:0000204!8.64e-07!4;UBERON:0010082!8.64e-07!4;UBERON:0002148!8.90e-07!2;UBERON:0009662!8.90e-07!2;UBERON:0000477!9.32e-07!286|ontology_enrichment_uberon_v019=UBERON:0000941;3.67e-23;1!UBERON:0001785;3.67e-23;1!UBERON:0002464;3.67e-23;1!UBERON:0004904;3.67e-23;1!UBERON:0001021;3.67e-23;1!UBERON:0002771;1.65e-12;2!UBERON:0003714;2.74e-12;2!UBERON:0005162;2.74e-12;2!UBERON:0000122;2.74e-12;2!UBERON:0001016;1.52e-07;83|ontology_enrichment_uberon_v019_2=UBERON:0000941,3.28e-23,1;UBERON:0001785,3.28e-23,1;UBERON:0002464,3.28e-23,1;UBERON:0004904,3.28e-23,1;UBERON:0001021,3.28e-23,1;UBERON:0003902,3.28e-23,1;UBERON:0005425,3.28e-23,1;UBERON:0002771,1.48e-12,2;UBERON:0003714,2.59e-12,2;UBERON:0005162,2.59e-12,2;UBERON:0000122,2.59e-12,2;UBERON:0001016,1.36e-08,89;UBERON:0001781,8.61e-07,4;UBERON:0001017,8.95e-07,81|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76228387266739,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.562677665642051,0,0,0,0,0,0.503865495708552,0,0,0,0,0,0,0,0,0,0,0.278304294485554,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0.741412462787447,0,0.468528891450678,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0.343972064943233,0,0,0,0,0,2.25980740780532,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:117387379..117387405,- | |||
|id=chr11:117387379..117387405,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;2.74e-12;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;3.67e-23;1!UBERON:0006238;6.10e-09;10!UBERON:0003056;1.26e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.65e-56!57;UBERON:0005068!3.65e-56!57;UBERON:0006241!3.65e-56!57;UBERON:0007135!3.65e-56!57;UBERON:0001017!4.08e-54!82;UBERON:0005743!7.66e-54!86;UBERON:0000073!1.82e-50!94;UBERON:0001016!1.82e-50!94;UBERON:0000955!5.57e-50!69;UBERON:0006238!5.57e-50!69;UBERON:0002780!5.00e-48!41;UBERON:0001890!5.00e-48!41;UBERON:0006240!5.00e-48!41;UBERON:0002616!1.57e-47!59;UBERON:0003080!1.01e-46!42;UBERON:0001893!2.28e-42!34;UBERON:0002020!4.25e-42!34;UBERON:0003528!4.25e-42!34;UBERON:0003075!6.57e-41!86;UBERON:0007284!6.57e-41!86;UBERON:0002791!6.32e-40!33;UBERON:0002346!1.20e-38!90;UBERON:0001869!2.00e-37!32;UBERON:0007023!7.79e-36!115;UBERON:0003056!7.43e-35!61;UBERON:0002619!4.64e-33!22;UBERON:0001950!2.61e-32!20;UBERON:0000033!6.99e-29!123;UBERON:0000956!1.03e-28!25;UBERON:0000203!1.03e-28!25;UBERON:0000153!1.35e-28!129;UBERON:0007811!1.35e-28!129;UBERON:0004121!4.46e-26!169;UBERON:0000924!3.28e-25!173;UBERON:0006601!3.28e-25!173;UBERON:0001871!3.49e-18!7;UBERON:0002420!2.63e-15!9;UBERON:0007245!2.63e-15!9;UBERON:0010009!2.63e-15!9;UBERON:0010011!2.63e-15!9;UBERON:0000454!2.63e-15!9;UBERON:0002308!6.60e-15!9;UBERON:0000125!6.60e-15!9;UBERON:0000200!9.25e-13!6;UBERON:0000025!1.36e-12!194;UBERON:0002298!2.58e-12!8;UBERON:0003076!1.01e-10!15;UBERON:0003057!1.01e-10!15;UBERON:0002771!2.78e-10!3;UBERON:0009663!3.56e-10!7;UBERON:0004732!8.50e-10!13;UBERON:0000349!1.24e-09!5;UBERON:0001872!1.29e-09!5;UBERON:0006331!1.52e-09!3;UBERON:0002021!1.73e-09!5;UBERON:0000988!3.94e-09!3;UBERON:0000483!5.69e-09!309;UBERON:0000475!5.87e-09!365;UBERON:0000119!8.80e-09!312;UBERON:0004111!2.41e-08!241;UBERON:0000064!8.66e-08!219;UBERON:0004733!9.47e-08!12;UBERON:0002028!9.47e-08!12;UBERON:0007277!9.47e-08!12;UBERON:0005162!1.93e-07!2;UBERON:0000122!1.93e-07!2;UBERON:0001876!2.54e-07!2;UBERON:0001897!2.54e-07!2;UBERON:0001894!4.06e-07!7;UBERON:0006222!4.06e-07!7;UBERON:0000369!8.64e-07!4;UBERON:0002435!8.64e-07!4;UBERON:0000204!8.64e-07!4;UBERON:0010082!8.64e-07!4;UBERON:0002148!8.90e-07!2;UBERON:0009662!8.90e-07!2;UBERON:0000477!9.32e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;3.67e-23;1!UBERON:0001785;3.67e-23;1!UBERON:0002464;3.67e-23;1!UBERON:0004904;3.67e-23;1!UBERON:0001021;3.67e-23;1!UBERON:0002771;1.65e-12;2!UBERON:0003714;2.74e-12;2!UBERON:0005162;2.74e-12;2!UBERON:0000122;2.74e-12;2!UBERON:0001016;1.52e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,3.28e-23,1;UBERON:0001785,3.28e-23,1;UBERON:0002464,3.28e-23,1;UBERON:0004904,3.28e-23,1;UBERON:0001021,3.28e-23,1;UBERON:0003902,3.28e-23,1;UBERON:0005425,3.28e-23,1;UBERON:0002771,1.48e-12,2;UBERON:0003714,2.59e-12,2;UBERON:0005162,2.59e-12,2;UBERON:0000122,2.59e-12,2;UBERON:0001016,1.36e-08,89;UBERON:0001781,8.61e-07,4;UBERON:0001017,8.95e-07,81 | |||
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|short_description=p@chr11:117387379..117387405,- | |||
}} |
Revision as of 15:56, 10 September 2013
Short description: | p@chr11:117387379..117387405, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:117387379..117387405, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 3.28e-23 | 1 |
cranial nerve | 3.28e-23 | 1 |
nerve trunk | 3.28e-23 | 1 |
nerve connecting eye with brain | 3.28e-23 | 1 |
nerve | 3.28e-23 | 1 |
retinal neural layer | 3.28e-23 | 1 |
presumptive neural retina | 3.28e-23 | 1 |
middle temporal gyrus | 1.48e-12 | 2 |
neural tissue | 2.59e-12 | 2 |
multi cell component structure | 2.59e-12 | 2 |
neuron projection bundle | 2.59e-12 | 2 |
nervous system | 1.36e-08 | 89 |
layer of retina | 8.61e-07 | 4 |
central nervous system | 8.95e-07 | 81 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.