FFCP PHASE1:Hg19::chr11:117075245..117075293,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C493|description=CAGE_peak_at_chr11:117075245..117075293,-|id=chr11:117075245..117075293,-|ontology_enrichment_celltype=CL:0000055!3.87e-25!180;CL:0000680!1.18e-16!57;CL:0000056!1.18e-16!57;CL:0000355!1.18e-16!57;CL:0000183!2.68e-16!59;CL:0000192!5.57e-16!42;CL:0000514!5.57e-16!42;CL:0000393!1.55e-15!60;CL:0000211!1.55e-15!60;CL:0000187!1.67e-15!54;CL:0000359!2.49e-14!32;CL:0000057!1.55e-09!75;CL:0000222!1.01e-07!119|ontology_enrichment_celltype_v019=CL:0000359;6.14e-15;32!CL:0000192;3.48e-10;43!CL:0002334;6.59e-08;12|ontology_enrichment_celltype_v019_2=CL:0000359,2.63e-15,32;CL:0000192,2.45e-14,43;CL:0000514,2.45e-14,43;CL:0000680,1.99e-13,58;CL:0000056,1.99e-13,58;CL:0000355,1.99e-13,58;CL:0000187,5.52e-12,55;CL:0000057,7.47e-11,76;CL:0000393,7.48e-10,61;CL:0000211,7.48e-10,61;CL:0002334,6.79e-08,12|ontology_enrichment_development_v019=CL:0000514;3.48e-10;43|ontology_enrichment_disease=DOID:2394!8.18e-07!14|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005256!1.01e-17!143;UBERON:0002385!5.96e-16!63;UBERON:0001015!5.96e-16!63;UBERON:0000383!5.96e-16!63;UBERON:0001134!5.25e-15!61;UBERON:0002036!5.25e-15!61;UBERON:0003082!5.25e-15!61;UBERON:0000914!1.43e-14!83;UBERON:0002329!1.43e-14!83;UBERON:0003077!1.43e-14!83;UBERON:0003059!1.43e-14!83;UBERON:0007282!1.43e-14!83;UBERON:0009618!1.43e-14!83;UBERON:0007285!1.43e-14!83;UBERON:0002100!1.81e-14!216;UBERON:0004290!6.35e-13!70;UBERON:0000486!2.06e-12!82;UBERON:0003914!1.24e-10!118;UBERON:0004872!1.73e-10!84;UBERON:0000481!3.45e-10!347;UBERON:0000475!4.04e-10!365;UBERON:0000490!8.39e-10!138;UBERON:0003104!1.35e-09!238;UBERON:0009142!1.35e-09!238;UBERON:0001637!3.29e-09!42;UBERON:0003509!3.29e-09!42;UBERON:0004572!3.29e-09!42;UBERON:0000468!8.33e-09!659;UBERON:0004573!7.09e-08!33;UBERON:0004571!7.09e-08!33;UBERON:0002049!2.39e-07!79;UBERON:0007798!2.39e-07!79;UBERON:0001981!2.82e-07!60;UBERON:0007500!2.82e-07!60;UBERON:0004537!2.82e-07!60;UBERON:0006965!2.82e-07!60;UBERON:0000926!4.37e-07!448;UBERON:0004120!4.37e-07!448;UBERON:0006603!4.37e-07!448;UBERON:0001135!9.07e-07!15|ontology_enrichment_uberon_v019=UBERON:0004573;1.65e-08;33!UBERON:0004571;1.65e-08;33!UBERON:0001637;2.56e-08;42!UBERON:0003509;2.56e-08;42!UBERON:0004572;2.56e-08;42!UBERON:0003688;1.42e-07;6!UBERON:0002358;1.42e-07;6!UBERON:0003684;1.42e-07;6!UBERON:0001178;1.42e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0002385,5.32e-13,64;UBERON:0001015,5.32e-13,64;UBERON:0000383,5.32e-13,64;UBERON:0001637,5.63e-12,42;UBERON:0003509,5.63e-12,42;UBERON:0004572,5.63e-12,42;UBERON:0001134,7.29e-12,62;UBERON:0002036,7.29e-12,62;UBERON:0003082,7.29e-12,62;UBERON:0005256,1.30e-11,122;UBERON:0007524,4.89e-11,73;UBERON:0002329,1.11e-10,71;UBERON:0003059,1.11e-10,71;UBERON:0007282,1.11e-10,71;UBERON:0004290,1.11e-10,71;UBERON:0009618,1.11e-10,71;UBERON:0003077,2.20e-10,72;UBERON:0007285,2.20e-10,72;UBERON:0007503,3.08e-10,78;UBERON:0003104,3.85e-10,160;UBERON:0009142,3.85e-10,160;UBERON:0002049,4.55e-10,78;UBERON:0007798,4.55e-10,78;UBERON:0000486,1.73e-09,83;UBERON:0007500,2.21e-09,59;UBERON:0001981,2.21e-09,59;UBERON:0004537,2.21e-09,59;UBERON:0006965,2.21e-09,59;UBERON:0004573,2.31e-09,33;UBERON:0004571,2.31e-09,33;UBERON:0004872,4.07e-09,83;UBERON:0002100,7.24e-09,199;UBERON:0003914,6.46e-08,117;UBERON:0000055,1.18e-07,68;UBERON:0003688,1.29e-07,6;UBERON:0002358,1.29e-07,6;UBERON:0003684,1.29e-07,6;UBERON:0001178,1.29e-07,6;UBERON:0004535,1.69e-07,109;UBERON:0000490,3.41e-07,148;UBERON:0001009,5.35e-07,112;UBERON:0000926,7.71e-07,315;UBERON:0004120,7.71e-07,315;UBERON:0006603,7.71e-07,315|phase1_expression=7.63049192936338,5.56661362116556,5.07435854745496,13.009528785907,10.2801051718276,14.8297549097063,25.3299878168311,0.631719873426831,0.522371256399677,1.72013755551056,3.48900583986214,0.655324116390517,0.791300934685361,0.123766352960047,0.662794751455832,9.41255205032485,7.23233433628772,5.11217063271161,12.1983199697627,0.123121058076788,0.612002073732759,3.13454721478088,0.85870796139317,0.958120975510189,1.25542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,10.9961803185436,1.44575660953827,1.50401373190767,2.02785126545153,0,0.486634870302636,1.60709189178915,3.99112915432615,2.54720878510066,0.785874452986276,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,2.43042584364528,0,0,0,0,0,0,0,0,0,9.93943903390637,5.95163404823525,2.25095607382472,0,1.41867352879343,5.04609840128076,3.20246987189115,10.853372130355,0.311211035399766,0.269421344139376,0.163461903113459,0.302714855289863,0,0,0,0,0.14944868055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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C493 | |||
|description=CAGE_peak_at_chr11:117075245..117075293,- | |||
|id=chr11:117075245..117075293,- | |||
|ontology_enrichment_celltype=CL:0000055!3.87e-25!180;CL:0000680!1.18e-16!57;CL:0000056!1.18e-16!57;CL:0000355!1.18e-16!57;CL:0000183!2.68e-16!59;CL:0000192!5.57e-16!42;CL:0000514!5.57e-16!42;CL:0000393!1.55e-15!60;CL:0000211!1.55e-15!60;CL:0000187!1.67e-15!54;CL:0000359!2.49e-14!32;CL:0000057!1.55e-09!75;CL:0000222!1.01e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000359;6.14e-15;32!CL:0000192;3.48e-10;43!CL:0002334;6.59e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,2.63e-15,32;CL:0000192,2.45e-14,43;CL:0000514,2.45e-14,43;CL:0000680,1.99e-13,58;CL:0000056,1.99e-13,58;CL:0000355,1.99e-13,58;CL:0000187,5.52e-12,55;CL:0000057,7.47e-11,76;CL:0000393,7.48e-10,61;CL:0000211,7.48e-10,61;CL:0002334,6.79e-08,12 | |||
|ontology_enrichment_development_v019=CL:0000514;3.48e-10;43 | |||
|ontology_enrichment_disease=DOID:2394!8.18e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!1.01e-17!143;UBERON:0002385!5.96e-16!63;UBERON:0001015!5.96e-16!63;UBERON:0000383!5.96e-16!63;UBERON:0001134!5.25e-15!61;UBERON:0002036!5.25e-15!61;UBERON:0003082!5.25e-15!61;UBERON:0000914!1.43e-14!83;UBERON:0002329!1.43e-14!83;UBERON:0003077!1.43e-14!83;UBERON:0003059!1.43e-14!83;UBERON:0007282!1.43e-14!83;UBERON:0009618!1.43e-14!83;UBERON:0007285!1.43e-14!83;UBERON:0002100!1.81e-14!216;UBERON:0004290!6.35e-13!70;UBERON:0000486!2.06e-12!82;UBERON:0003914!1.24e-10!118;UBERON:0004872!1.73e-10!84;UBERON:0000481!3.45e-10!347;UBERON:0000475!4.04e-10!365;UBERON:0000490!8.39e-10!138;UBERON:0003104!1.35e-09!238;UBERON:0009142!1.35e-09!238;UBERON:0001637!3.29e-09!42;UBERON:0003509!3.29e-09!42;UBERON:0004572!3.29e-09!42;UBERON:0000468!8.33e-09!659;UBERON:0004573!7.09e-08!33;UBERON:0004571!7.09e-08!33;UBERON:0002049!2.39e-07!79;UBERON:0007798!2.39e-07!79;UBERON:0001981!2.82e-07!60;UBERON:0007500!2.82e-07!60;UBERON:0004537!2.82e-07!60;UBERON:0006965!2.82e-07!60;UBERON:0000926!4.37e-07!448;UBERON:0004120!4.37e-07!448;UBERON:0006603!4.37e-07!448;UBERON:0001135!9.07e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.65e-08;33!UBERON:0004571;1.65e-08;33!UBERON:0001637;2.56e-08;42!UBERON:0003509;2.56e-08;42!UBERON:0004572;2.56e-08;42!UBERON:0003688;1.42e-07;6!UBERON:0002358;1.42e-07;6!UBERON:0003684;1.42e-07;6!UBERON:0001178;1.42e-07;6 | |||
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| |||
|short_description=p@chr11:117075245..117075293,- | |||
}} |
Revision as of 15:55, 10 September 2013
Short description: | p@chr11:117075245..117075293, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:117075245..117075293, - |
Coexpression cluster: | C493_Adipocyte_basal_Mesenchymal_Smooth_mesenchymal_Aortic_Multipotent |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 2.63e-15 | 32 |
smooth muscle cell | 2.45e-14 | 43 |
smooth muscle myoblast | 2.45e-14 | 43 |
muscle precursor cell | 1.99e-13 | 58 |
myoblast | 1.99e-13 | 58 |
multi-potent skeletal muscle stem cell | 1.99e-13 | 58 |
muscle cell | 5.52e-12 | 55 |
fibroblast | 7.47e-11 | 76 |
electrically responsive cell | 7.48e-10 | 61 |
electrically active cell | 7.48e-10 | 61 |
preadipocyte | 6.79e-08 | 12 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.