FFCP PHASE1:Hg19::chr11:117075220..117075249,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=|TSSclassifier=N|UniProt=|association_with_transcript=-433bp_to_uc001pqq.1_5end|coexpression_cluster_id=C384|description=CAGE_peak_1_at_uc001pqq.1_5end|id=chr11:117075220..117075249,+|ontology_enrichment_celltype=CL:0000055!1.48e-22!180;CL:0000192!1.03e-13!42;CL:0000514!1.03e-13!42;CL:0000680!7.13e-13!57;CL:0000056!7.13e-13!57;CL:0000355!7.13e-13!57;CL:0000359!7.34e-13!32;CL:0000393!2.42e-12!60;CL:0000211!2.42e-12!60;CL:0000187!2.56e-12!54;CL:0000183!3.93e-12!59;CL:0000057!3.75e-09!75;CL:0000136!3.17e-08!15;CL:0000222!4.99e-07!119|ontology_enrichment_celltype_v019=CL:0000359;1.99e-14;32!CL:0000192;3.04e-10;43!CL:0002334;4.29e-07;12|ontology_enrichment_celltype_v019_2=CL:0000359,3.71e-15,32;CL:0000192,1.43e-13,43;CL:0000514,1.43e-13,43;CL:0000393,1.73e-11,61;CL:0000211,1.73e-11,61;CL:0000680,3.26e-11,58;CL:0000056,3.26e-11,58;CL:0000355,3.26e-11,58;CL:0000057,3.95e-11,76;CL:0000187,6.75e-11,55;CL:0002334,5.84e-07,12|ontology_enrichment_development_v019=CL:0000514;3.04e-10;43|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002385!5.61e-14!63;UBERON:0001015!5.61e-14!63;UBERON:0000383!5.61e-14!63;UBERON:0001134!4.81e-13!61;UBERON:0002036!4.81e-13!61;UBERON:0003082!4.81e-13!61;UBERON:0005256!1.38e-12!143;UBERON:0000914!1.74e-11!83;UBERON:0002329!1.74e-11!83;UBERON:0003077!1.74e-11!83;UBERON:0003059!1.74e-11!83;UBERON:0007282!1.74e-11!83;UBERON:0009618!1.74e-11!83;UBERON:0007285!1.74e-11!83;UBERON:0004872!3.08e-11!84;UBERON:0004290!3.39e-11!70;UBERON:0002100!1.23e-10!216;UBERON:0001637!1.86e-09!42;UBERON:0003509!1.86e-09!42;UBERON:0004572!1.86e-09!42;UBERON:0000486!2.10e-09!82;UBERON:0004573!6.23e-09!33;UBERON:0004571!6.23e-09!33;UBERON:0001981!1.77e-08!60;UBERON:0007500!1.77e-08!60;UBERON:0004537!1.77e-08!60;UBERON:0006965!1.77e-08!60;UBERON:0003914!2.34e-08!118;UBERON:0002049!3.85e-08!79;UBERON:0007798!3.85e-08!79;UBERON:0000475!2.95e-07!365;UBERON:0000055!6.47e-07!69;UBERON:0003104!6.61e-07!238;UBERON:0009142!6.61e-07!238|ontology_enrichment_uberon_v019=UBERON:0004573;8.96e-11;33!UBERON:0004571;8.96e-11;33!UBERON:0001637;6.70e-10;42!UBERON:0003509;6.70e-10;42!UBERON:0004572;6.70e-10;42!UBERON:0003688;6.96e-08;6!UBERON:0002358;6.96e-08;6!UBERON:0003684;6.96e-08;6!UBERON:0001178;6.96e-08;6|ontology_enrichment_uberon_v019_2=UBERON:0001637,8.65e-14,42;UBERON:0003509,8.65e-14,42;UBERON:0004572,8.65e-14,42;UBERON:0004573,1.74e-12,33;UBERON:0004571,1.74e-12,33;UBERON:0002385,2.86e-12,64;UBERON:0001015,2.86e-12,64;UBERON:0000383,2.86e-12,64;UBERON:0005256,6.32e-12,122;UBERON:0001134,3.57e-11,62;UBERON:0002036,3.57e-11,62;UBERON:0003082,3.57e-11,62;UBERON:0007500,6.51e-11,59;UBERON:0001981,6.51e-11,59;UBERON:0004537,6.51e-11,59;UBERON:0006965,6.51e-11,59;UBERON:0007524,1.28e-10,73;UBERON:0007503,1.98e-10,78;UBERON:0002329,2.32e-10,71;UBERON:0003059,2.32e-10,71;UBERON:0007282,2.32e-10,71;UBERON:0004290,2.32e-10,71;UBERON:0009618,2.32e-10,71;UBERON:0003104,2.96e-10,160;UBERON:0009142,2.96e-10,160;UBERON:0002100,2.96e-10,199;UBERON:0004872,3.12e-10,83;UBERON:0003077,4.70e-10,72;UBERON:0007285,4.70e-10,72;UBERON:0002049,2.99e-09,78;UBERON:0007798,2.99e-09,78;UBERON:0000486,8.14e-09,83;UBERON:0000055,1.03e-08,68;UBERON:0003914,6.49e-08,117;UBERON:0003688,7.26e-08,6;UBERON:0002358,7.26e-08,6;UBERON:0003684,7.26e-08,6;UBERON:0001178,7.26e-08,6|phase1_expression=35.0639271992174,15.4152377201508,36.3662362567606,21.0153926541574,49.1657203870017,27.9148327712118,96.253953703958,1.89515962028049,0.522371256399677,1.22866968250754,5.58240934377942,0.218441372130172,1.05506791291381,0,0.331397375727916,6.72325146451775,2.41077811209591,3.65155045193687,5.36726078669558,0.861847406537515,0.816002764977012,0.940364164434263,0.85870796139317,0.273748850145768,0.87879847716362,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0.150176892841506,0,0.285012743741249,0,0.365328307529268,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,2.81297636055767,2.89151321907653,5.51471701699479,2.31754430337318,3.9764297352555,0.973269740605272,0.945348171640679,3.1042115644759,1.66886092816939,1.76821751921912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,3.24056779152704,0,0,0,0,0,0.183201743930407,0,0,0.436094052142534,7.9515512271251,11.5233765614768,2.38336525463794,3.44203944898576,3.54668382198357,2.80338800071154,3.20246987189115,10.853372130355,0.311211035399766,0.67355336034844,0.490385709340376,1.05950199351452,0,0,0,0,0,0,0,0,0,0,0,14.2560342873846,21.2649559179559,1.82032272387605,0.718618141816238,0,0,0,5.26773145057006,9.50112166976961,15.0238058906597,1.24775401476023,3.04962380671065,3.20336083227851,1.48352330811693,1.200364384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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-433bp_to_uc001pqq.1_5end | |||
|coexpression_cluster_id=C384 | |||
|description=CAGE_peak_1_at_uc001pqq.1_5end | |||
|id=chr11:117075220..117075249,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.48e-22!180;CL:0000192!1.03e-13!42;CL:0000514!1.03e-13!42;CL:0000680!7.13e-13!57;CL:0000056!7.13e-13!57;CL:0000355!7.13e-13!57;CL:0000359!7.34e-13!32;CL:0000393!2.42e-12!60;CL:0000211!2.42e-12!60;CL:0000187!2.56e-12!54;CL:0000183!3.93e-12!59;CL:0000057!3.75e-09!75;CL:0000136!3.17e-08!15;CL:0000222!4.99e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.99e-14;32!CL:0000192;3.04e-10;43!CL:0002334;4.29e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,3.71e-15,32;CL:0000192,1.43e-13,43;CL:0000514,1.43e-13,43;CL:0000393,1.73e-11,61;CL:0000211,1.73e-11,61;CL:0000680,3.26e-11,58;CL:0000056,3.26e-11,58;CL:0000355,3.26e-11,58;CL:0000057,3.95e-11,76;CL:0000187,6.75e-11,55;CL:0002334,5.84e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000514;3.04e-10;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002385!5.61e-14!63;UBERON:0001015!5.61e-14!63;UBERON:0000383!5.61e-14!63;UBERON:0001134!4.81e-13!61;UBERON:0002036!4.81e-13!61;UBERON:0003082!4.81e-13!61;UBERON:0005256!1.38e-12!143;UBERON:0000914!1.74e-11!83;UBERON:0002329!1.74e-11!83;UBERON:0003077!1.74e-11!83;UBERON:0003059!1.74e-11!83;UBERON:0007282!1.74e-11!83;UBERON:0009618!1.74e-11!83;UBERON:0007285!1.74e-11!83;UBERON:0004872!3.08e-11!84;UBERON:0004290!3.39e-11!70;UBERON:0002100!1.23e-10!216;UBERON:0001637!1.86e-09!42;UBERON:0003509!1.86e-09!42;UBERON:0004572!1.86e-09!42;UBERON:0000486!2.10e-09!82;UBERON:0004573!6.23e-09!33;UBERON:0004571!6.23e-09!33;UBERON:0001981!1.77e-08!60;UBERON:0007500!1.77e-08!60;UBERON:0004537!1.77e-08!60;UBERON:0006965!1.77e-08!60;UBERON:0003914!2.34e-08!118;UBERON:0002049!3.85e-08!79;UBERON:0007798!3.85e-08!79;UBERON:0000475!2.95e-07!365;UBERON:0000055!6.47e-07!69;UBERON:0003104!6.61e-07!238;UBERON:0009142!6.61e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;8.96e-11;33!UBERON:0004571;8.96e-11;33!UBERON:0001637;6.70e-10;42!UBERON:0003509;6.70e-10;42!UBERON:0004572;6.70e-10;42!UBERON:0003688;6.96e-08;6!UBERON:0002358;6.96e-08;6!UBERON:0003684;6.96e-08;6!UBERON:0001178;6.96e-08;6 | |||
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| |||
|short_description=p1@uc001pqq.1 | |||
}} |
Revision as of 15:55, 10 September 2013
Short description: | p1@uc001pqq.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_uc001pqq.1_5end |
Coexpression cluster: | C384_Adipocyte_smooth_bladder_left_aorta_Osteoblast_colon |
Association with transcript: | -433bp_to_uc001pqq.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 3.71e-15 | 32 |
smooth muscle cell | 1.43e-13 | 43 |
smooth muscle myoblast | 1.43e-13 | 43 |
electrically responsive cell | 1.73e-11 | 61 |
electrically active cell | 1.73e-11 | 61 |
muscle precursor cell | 3.26e-11 | 58 |
myoblast | 3.26e-11 | 58 |
multi-potent skeletal muscle stem cell | 3.26e-11 | 58 |
fibroblast | 3.95e-11 | 76 |
muscle cell | 6.75e-11 | 55 |
preadipocyte | 5.84e-07 | 12 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.