FFCP PHASE1:Hg19::chr11:117070904..117070918,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6876|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11553|TSSclassifier=S|UniProt=E9PJ32|association_with_transcript=-52bp_to_ENST00000529792_5end|coexpression_cluster_id=C493|description=CAGE_peak_4_at_TAGLN_5end|id=chr11:117070904..117070918,+|ontology_enrichment_celltype=CL:0000055!3.68e-21!180;CL:0000359!8.01e-21!32;CL:0000192!3.17e-18!42;CL:0000514!3.17e-18!42;CL:0000680!3.50e-17!57;CL:0000056!3.50e-17!57;CL:0000355!3.50e-17!57;CL:0000187!1.46e-16!54;CL:0000183!3.95e-14!59;CL:0000393!1.07e-13!60;CL:0000211!1.07e-13!60;CL:0000057!2.48e-10!75;CL:0002494!2.24e-08!16;CL:0000222!4.50e-07!119;CL:0002539!5.35e-07!10|ontology_enrichment_celltype_v019=CL:0000359;1.82e-29;32!CL:0000192;5.07e-17;43!CL:0002539;9.30e-12;10!CL:0000187;1.56e-09;55!CL:0002594;4.54e-09;4!CL:0000393;1.82e-07;61!CL:0000211;1.82e-07;61!CL:0002595;3.12e-07;5!CL:0002615;3.12e-07;3!CL:0000136;3.97e-07;13|ontology_enrichment_celltype_v019_2=CL:0000359,9.46e-31,32;CL:0000192,8.64e-23,43;CL:0000514,8.64e-23,43;CL:0000680,6.75e-18,58;CL:0000056,6.75e-18,58;CL:0000355,6.75e-18,58;CL:0000187,9.89e-18,55;CL:0000393,3.01e-15,61;CL:0000211,3.01e-15,61;CL:0002539,8.08e-12,10;CL:0002594,5.22e-09,4;CL:0000222,1.29e-07,121;CL:0002615,2.37e-07,3;CL:0002595,2.72e-07,5|ontology_enrichment_development_v019=CL:0000514;5.07e-17;43!CL:0000355;4.40e-09;58|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0060084;1.05e-07;3!DOID:127;1.05e-07;3|ontology_enrichment_disease_v019_2=DOID:0060084,1.06e-07,3;DOID:127,1.06e-07,3|ontology_enrichment_uberon=UBERON:0002385!1.56e-17!63;UBERON:0001015!1.56e-17!63;UBERON:0000383!1.56e-17!63;UBERON:0001637!7.14e-17!42;UBERON:0003509!7.14e-17!42;UBERON:0004572!7.14e-17!42;UBERON:0004872!1.45e-16!84;UBERON:0001134!3.86e-16!61;UBERON:0002036!3.86e-16!61;UBERON:0003082!3.86e-16!61;UBERON:0000914!1.14e-15!83;UBERON:0002329!1.14e-15!83;UBERON:0003077!1.14e-15!83;UBERON:0003059!1.14e-15!83;UBERON:0007282!1.14e-15!83;UBERON:0009618!1.14e-15!83;UBERON:0007285!1.14e-15!83;UBERON:0001981!3.86e-15!60;UBERON:0007500!3.86e-15!60;UBERON:0004537!3.86e-15!60;UBERON:0006965!3.86e-15!60;UBERON:0004290!2.71e-14!70;UBERON:0005256!3.55e-14!143;UBERON:0004573!3.77e-14!33;UBERON:0004571!3.77e-14!33;UBERON:0003914!1.24e-13!118;UBERON:0000055!1.82e-13!69;UBERON:0002049!2.58e-13!79;UBERON:0007798!2.58e-13!79;UBERON:0004535!4.56e-12!110;UBERON:0002100!7.19e-12!216;UBERON:0001009!2.46e-11!113;UBERON:0000486!5.17e-11!82;UBERON:0000490!2.34e-08!138;UBERON:0001135!2.11e-07!15;UBERON:0003104!2.31e-07!238;UBERON:0009142!2.31e-07!238;UBERON:0003513!2.76e-07!8;UBERON:0000926!3.15e-07!448;UBERON:0004120!3.15e-07!448;UBERON:0006603!3.15e-07!448;UBERON:0000948!3.86e-07!24;UBERON:0005498!3.86e-07!24;UBERON:0004140!3.86e-07!24;UBERON:0009881!3.86e-07!24;UBERON:0004141!3.86e-07!24;UBERON:0003084!3.86e-07!24;UBERON:0007005!3.86e-07!24;UBERON:0004139!3.86e-07!24;UBERON:0004291!3.86e-07!24;UBERON:0000475!4.65e-07!365;UBERON:0004237!5.35e-07!10;UBERON:0004695!5.35e-07!10;UBERON:0002111!5.35e-07!10;UBERON:0004178!5.35e-07!10;UBERON:0003688!6.53e-07!6;UBERON:0002358!6.53e-07!6;UBERON:0003684!6.53e-07!6;UBERON:0001178!6.53e-07!6|ontology_enrichment_uberon_v019=UBERON:0004573;1.49e-16;33!UBERON:0004571;1.49e-16;33!UBERON:0001637;5.30e-15;42!UBERON:0003509;5.30e-15;42!UBERON:0004572;5.30e-15;42!UBERON:0004237;9.30e-12;10!UBERON:0004695;9.30e-12;10!UBERON:0002111;9.30e-12;10!UBERON:0004178;9.30e-12;10!UBERON:0001135;2.49e-11;15!UBERON:0001310;4.54e-09;4!UBERON:0003688;3.06e-08;6!UBERON:0002358;3.06e-08;6!UBERON:0003684;3.06e-08;6!UBERON:0001178;3.06e-08;6!UBERON:0007500;6.22e-08;56!UBERON:0001981;6.22e-08;56!UBERON:0004537;6.22e-08;56!UBERON:0003513;1.58e-07;7!UBERON:0000947;2.42e-07;21!UBERON:0010191;2.42e-07;21!UBERON:0003834;3.12e-07;5!UBERON:0001533;3.12e-07;5!UBERON:0006947;4.62e-07;3!UBERON:0004054;4.62e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0001637,4.00e-23,42;UBERON:0003509,4.00e-23,42;UBERON:0004572,4.00e-23,42;UBERON:0004573,4.99e-19,33;UBERON:0004571,4.99e-19,33;UBERON:0002385,2.97e-18,64;UBERON:0001015,2.97e-18,64;UBERON:0000383,2.97e-18,64;UBERON:0001134,3.08e-16,62;UBERON:0002036,3.08e-16,62;UBERON:0003082,3.08e-16,62;UBERON:0007500,7.87e-16,59;UBERON:0001981,7.87e-16,59;UBERON:0004537,7.87e-16,59;UBERON:0006965,7.87e-16,59;UBERON:0002329,2.20e-14,71;UBERON:0003059,2.20e-14,71;UBERON:0007282,2.20e-14,71;UBERON:0004290,2.20e-14,71;UBERON:0009618,2.20e-14,71;UBERON:0003077,4.47e-14,72;UBERON:0007285,4.47e-14,72;UBERON:0000055,5.31e-14,68;UBERON:0007524,8.91e-14,73;UBERON:0002049,1.72e-13,78;UBERON:0007798,1.72e-13,78;UBERON:0004872,2.39e-13,83;UBERON:0005256,5.40e-13,122;UBERON:0007503,2.12e-12,78;UBERON:0003914,5.08e-12,117;UBERON:0002100,6.26e-12,199;UBERON:0004237,8.08e-12,10;UBERON:0004695,8.08e-12,10;UBERON:0002111,8.08e-12,10;UBERON:0004178,8.08e-12,10;UBERON:0001135,2.60e-11,15;UBERON:0000486,3.37e-11,83;UBERON:0004535,8.94e-11,109;UBERON:0001009,2.94e-10,112;UBERON:00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,0,0.913158720509496,0,0,0.500335809236594,0,0,0,0,0,0,0,0.860454717640555,0,0,4.23387050190929,0,0,0,0,0,0,0,0.307988420568741,0,0,0,0,0,0,0,0,1.00326405540328,0,0,2.69663153929296,0,0.196308467114945,0,0,2.0391253762538,0.0939839179798536,0,0,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,0.5290268405154,3.34795516350076,0.462175628631418,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0,0,0,0,0,0.0636471582781649,0,0.870866991587845,0,0.134704106029175,0.573777643141411,0,0,0,0,0,2.34640942403454,2.32258743947446,1.22068853494722,0,0.805095174364105,0|short_description=p4@TAGLN}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=6876 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11553 | |||
|TSSclassifier=S | |||
|UniProt=E9PJ32 | |||
|association_with_transcript=-52bp_to_ENST00000529792_5end | |||
|coexpression_cluster_id=C493 | |||
|description=CAGE_peak_4_at_TAGLN_5end | |||
|id=chr11:117070904..117070918,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.68e-21!180;CL:0000359!8.01e-21!32;CL:0000192!3.17e-18!42;CL:0000514!3.17e-18!42;CL:0000680!3.50e-17!57;CL:0000056!3.50e-17!57;CL:0000355!3.50e-17!57;CL:0000187!1.46e-16!54;CL:0000183!3.95e-14!59;CL:0000393!1.07e-13!60;CL:0000211!1.07e-13!60;CL:0000057!2.48e-10!75;CL:0002494!2.24e-08!16;CL:0000222!4.50e-07!119;CL:0002539!5.35e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.82e-29;32!CL:0000192;5.07e-17;43!CL:0002539;9.30e-12;10!CL:0000187;1.56e-09;55!CL:0002594;4.54e-09;4!CL:0000393;1.82e-07;61!CL:0000211;1.82e-07;61!CL:0002595;3.12e-07;5!CL:0002615;3.12e-07;3!CL:0000136;3.97e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,9.46e-31,32;CL:0000192,8.64e-23,43;CL:0000514,8.64e-23,43;CL:0000680,6.75e-18,58;CL:0000056,6.75e-18,58;CL:0000355,6.75e-18,58;CL:0000187,9.89e-18,55;CL:0000393,3.01e-15,61;CL:0000211,3.01e-15,61;CL:0002539,8.08e-12,10;CL:0002594,5.22e-09,4;CL:0000222,1.29e-07,121;CL:0002615,2.37e-07,3;CL:0002595,2.72e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000514;5.07e-17;43!CL:0000355;4.40e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;1.05e-07;3!DOID:127;1.05e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.06e-07,3;DOID:127,1.06e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0002385!1.56e-17!63;UBERON:0001015!1.56e-17!63;UBERON:0000383!1.56e-17!63;UBERON:0001637!7.14e-17!42;UBERON:0003509!7.14e-17!42;UBERON:0004572!7.14e-17!42;UBERON:0004872!1.45e-16!84;UBERON:0001134!3.86e-16!61;UBERON:0002036!3.86e-16!61;UBERON:0003082!3.86e-16!61;UBERON:0000914!1.14e-15!83;UBERON:0002329!1.14e-15!83;UBERON:0003077!1.14e-15!83;UBERON:0003059!1.14e-15!83;UBERON:0007282!1.14e-15!83;UBERON:0009618!1.14e-15!83;UBERON:0007285!1.14e-15!83;UBERON:0001981!3.86e-15!60;UBERON:0007500!3.86e-15!60;UBERON:0004537!3.86e-15!60;UBERON:0006965!3.86e-15!60;UBERON:0004290!2.71e-14!70;UBERON:0005256!3.55e-14!143;UBERON:0004573!3.77e-14!33;UBERON:0004571!3.77e-14!33;UBERON:0003914!1.24e-13!118;UBERON:0000055!1.82e-13!69;UBERON:0002049!2.58e-13!79;UBERON:0007798!2.58e-13!79;UBERON:0004535!4.56e-12!110;UBERON:0002100!7.19e-12!216;UBERON:0001009!2.46e-11!113;UBERON:0000486!5.17e-11!82;UBERON:0000490!2.34e-08!138;UBERON:0001135!2.11e-07!15;UBERON:0003104!2.31e-07!238;UBERON:0009142!2.31e-07!238;UBERON:0003513!2.76e-07!8;UBERON:0000926!3.15e-07!448;UBERON:0004120!3.15e-07!448;UBERON:0006603!3.15e-07!448;UBERON:0000948!3.86e-07!24;UBERON:0005498!3.86e-07!24;UBERON:0004140!3.86e-07!24;UBERON:0009881!3.86e-07!24;UBERON:0004141!3.86e-07!24;UBERON:0003084!3.86e-07!24;UBERON:0007005!3.86e-07!24;UBERON:0004139!3.86e-07!24;UBERON:0004291!3.86e-07!24;UBERON:0000475!4.65e-07!365;UBERON:0004237!5.35e-07!10;UBERON:0004695!5.35e-07!10;UBERON:0002111!5.35e-07!10;UBERON:0004178!5.35e-07!10;UBERON:0003688!6.53e-07!6;UBERON:0002358!6.53e-07!6;UBERON:0003684!6.53e-07!6;UBERON:0001178!6.53e-07!6 | |||
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| |||
|short_description=p4@TAGLN | |||
}} |
Revision as of 15:54, 10 September 2013
Short description: | p4@TAGLN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_TAGLN_5end |
Coexpression cluster: | C493_Adipocyte_basal_Mesenchymal_Smooth_mesenchymal_Aortic_Multipotent |
Association with transcript: | -52bp_to_ENST00000529792_5end |
EntrezGene: | TAGLN |
HGNC: | 11553 |
UniProt: | E9PJ32 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 9.46e-31 | 32 |
smooth muscle cell | 8.64e-23 | 43 |
smooth muscle myoblast | 8.64e-23 | 43 |
muscle precursor cell | 6.75e-18 | 58 |
myoblast | 6.75e-18 | 58 |
multi-potent skeletal muscle stem cell | 6.75e-18 | 58 |
muscle cell | 9.89e-18 | 55 |
electrically responsive cell | 3.01e-15 | 61 |
electrically active cell | 3.01e-15 | 61 |
aortic smooth muscle cell | 8.08e-12 | 10 |
smooth muscle cell of the umbilical artery | 5.22e-09 | 4 |
mesodermal cell | 1.29e-07 | 121 |
adipocyte of omentum tissue | 2.37e-07 | 3 |
smooth muscle cell of the subclavian artery | 2.72e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.06e-07 | 3 |
leiomyoma | 1.06e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.