FFCP PHASE1:Hg19::chr11:102742640..102742679,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C54|description=CAGE_peak_at_chr11:102742640..102742679,-|id=chr11:102742640..102742679,-|ontology_enrichment_celltype=CL:0000840!3.62e-24!5;CL:0001029!3.62e-24!5;CL:0000990!3.36e-16!8;CL:0002539!1.59e-14!10;CL:0000451!2.72e-13!10;CL:0000359!8.31e-13!32;CL:0002574!1.07e-09!1;CL:0000192!1.41e-09!42;CL:0000514!1.41e-09!42;CL:0000187!2.24e-09!54;CL:0000680!7.93e-09!57;CL:0000056!7.93e-09!57;CL:0000355!7.93e-09!57;CL:0000183!1.71e-08!59;CL:0000393!2.47e-08!60;CL:0000211!2.47e-08!60|ontology_enrichment_celltype_v019=CL:0000840;2.38e-27;5!CL:0000990;1.24e-18;8!CL:0002539;8.81e-17;10!CL:0000451;1.88e-15;10!CL:0000359;4.88e-12;32!CL:0000192;1.76e-09;43!CL:0002595;2.74e-09;5|ontology_enrichment_celltype_v019_2=CL:0000840,2.08e-27,5;CL:0001029,2.08e-27,5;CL:0000990,1.13e-18,8;CL:0002539,9.54e-17,10;CL:0000451,1.74e-15,10;CL:0000359,6.35e-12,32;CL:0002595,2.74e-09,5;CL:0000192,4.45e-09,43;CL:0000514,4.45e-09,43;CL:0000187,2.93e-07,55;CL:0000680,6.40e-07,58;CL:0000056,6.40e-07,58;CL:0000355,6.40e-07,58|ontology_enrichment_development_v019=CL:0000514;1.76e-09;43|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004237!1.59e-14!10;UBERON:0004695!1.59e-14!10;UBERON:0002111!1.59e-14!10;UBERON:0004178!1.59e-14!10;UBERON:0001154!5.30e-10!1;UBERON:0001153!5.30e-10!1;UBERON:0001282!8.99e-10!1;UBERON:0009842!8.99e-10!1;UBERON:0003704!8.99e-10!1;UBERON:0001171!8.99e-10!1;UBERON:0001172!8.99e-10!1;UBERON:0001135!9.65e-10!15;UBERON:0001637!1.41e-09!42;UBERON:0003509!1.41e-09!42;UBERON:0004572!1.41e-09!42;UBERON:0004573!3.06e-09!33;UBERON:0004571!3.06e-09!33;UBERON:0001134!3.52e-08!61;UBERON:0002036!3.52e-08!61;UBERON:0003082!3.52e-08!61;UBERON:0002385!6.90e-08!63;UBERON:0001015!6.90e-08!63;UBERON:0000383!6.90e-08!63;UBERON:0001045!1.60e-07!11;UBERON:0000914!2.92e-07!83;UBERON:0002329!2.92e-07!83;UBERON:0003077!2.92e-07!83;UBERON:0003059!2.92e-07!83;UBERON:0007282!2.92e-07!83;UBERON:0009618!2.92e-07!83;UBERON:0007285!2.92e-07!83;UBERON:0004290!5.39e-07!70;UBERON:0000947!5.42e-07!21;UBERON:0010191!5.42e-07!21|ontology_enrichment_uberon_v019=UBERON:0004237;8.81e-17;10!UBERON:0004695;8.81e-17;10!UBERON:0002111;8.81e-17;10!UBERON:0004178;8.81e-17;10!UBERON:0001135;1.49e-11;15!UBERON:0004573;2.14e-11;33!UBERON:0004571;2.14e-11;33!UBERON:0003834;2.74e-09;5!UBERON:0001533;2.74e-09;5!UBERON:0001637;1.04e-08;42!UBERON:0003509;1.04e-08;42!UBERON:0004572;1.04e-08;42!UBERON:0000947;1.53e-08;21!UBERON:0010191;1.53e-08;21!UBERON:0003513;5.38e-07;7|ontology_enrichment_uberon_v019_2=UBERON:0004237,9.54e-17,10;UBERON:0004695,9.54e-17,10;UBERON:0002111,9.54e-17,10;UBERON:0004178,9.54e-17,10;UBERON:0004573,1.38e-11,33;UBERON:0004571,1.38e-11,33;UBERON:0001135,1.58e-11,15;UBERON:0003834,2.74e-09,5;UBERON:0001533,2.74e-09,5;UBERON:0001637,2.82e-09,42;UBERON:0003509,2.82e-09,42;UBERON:0004572,2.82e-09,42;UBERON:0000947,1.59e-08,21;UBERON:0010191,1.59e-08,21;UBERON:0003513,5.38e-07,7;UBERON:0007500,8.16e-07,59;UBERON:0001981,8.16e-07,59;UBERON:0004537,8.16e-07,59;UBERON:0006965,8.16e-07,59|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,1.20538905604795,1.46062018077475,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.97364218096405,1.91542711029194,6.38198210490553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.19225442626881,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0.23056390438806,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C54 | |||
|description=CAGE_peak_at_chr11:102742640..102742679,- | |||
|id=chr11:102742640..102742679,- | |||
|ontology_enrichment_celltype=CL:0000840!3.62e-24!5;CL:0001029!3.62e-24!5;CL:0000990!3.36e-16!8;CL:0002539!1.59e-14!10;CL:0000451!2.72e-13!10;CL:0000359!8.31e-13!32;CL:0002574!1.07e-09!1;CL:0000192!1.41e-09!42;CL:0000514!1.41e-09!42;CL:0000187!2.24e-09!54;CL:0000680!7.93e-09!57;CL:0000056!7.93e-09!57;CL:0000355!7.93e-09!57;CL:0000183!1.71e-08!59;CL:0000393!2.47e-08!60;CL:0000211!2.47e-08!60 | |||
|ontology_enrichment_celltype_v019=CL:0000840;2.38e-27;5!CL:0000990;1.24e-18;8!CL:0002539;8.81e-17;10!CL:0000451;1.88e-15;10!CL:0000359;4.88e-12;32!CL:0000192;1.76e-09;43!CL:0002595;2.74e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000840,2.08e-27,5;CL:0001029,2.08e-27,5;CL:0000990,1.13e-18,8;CL:0002539,9.54e-17,10;CL:0000451,1.74e-15,10;CL:0000359,6.35e-12,32;CL:0002595,2.74e-09,5;CL:0000192,4.45e-09,43;CL:0000514,4.45e-09,43;CL:0000187,2.93e-07,55;CL:0000680,6.40e-07,58;CL:0000056,6.40e-07,58;CL:0000355,6.40e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000514;1.76e-09;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004237!1.59e-14!10;UBERON:0004695!1.59e-14!10;UBERON:0002111!1.59e-14!10;UBERON:0004178!1.59e-14!10;UBERON:0001154!5.30e-10!1;UBERON:0001153!5.30e-10!1;UBERON:0001282!8.99e-10!1;UBERON:0009842!8.99e-10!1;UBERON:0003704!8.99e-10!1;UBERON:0001171!8.99e-10!1;UBERON:0001172!8.99e-10!1;UBERON:0001135!9.65e-10!15;UBERON:0001637!1.41e-09!42;UBERON:0003509!1.41e-09!42;UBERON:0004572!1.41e-09!42;UBERON:0004573!3.06e-09!33;UBERON:0004571!3.06e-09!33;UBERON:0001134!3.52e-08!61;UBERON:0002036!3.52e-08!61;UBERON:0003082!3.52e-08!61;UBERON:0002385!6.90e-08!63;UBERON:0001015!6.90e-08!63;UBERON:0000383!6.90e-08!63;UBERON:0001045!1.60e-07!11;UBERON:0000914!2.92e-07!83;UBERON:0002329!2.92e-07!83;UBERON:0003077!2.92e-07!83;UBERON:0003059!2.92e-07!83;UBERON:0007282!2.92e-07!83;UBERON:0009618!2.92e-07!83;UBERON:0007285!2.92e-07!83;UBERON:0004290!5.39e-07!70;UBERON:0000947!5.42e-07!21;UBERON:0010191!5.42e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0004237;8.81e-17;10!UBERON:0004695;8.81e-17;10!UBERON:0002111;8.81e-17;10!UBERON:0004178;8.81e-17;10!UBERON:0001135;1.49e-11;15!UBERON:0004573;2.14e-11;33!UBERON:0004571;2.14e-11;33!UBERON:0003834;2.74e-09;5!UBERON:0001533;2.74e-09;5!UBERON:0001637;1.04e-08;42!UBERON:0003509;1.04e-08;42!UBERON:0004572;1.04e-08;42!UBERON:0000947;1.53e-08;21!UBERON:0010191;1.53e-08;21!UBERON:0003513;5.38e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004237,9.54e-17,10;UBERON:0004695,9.54e-17,10;UBERON:0002111,9.54e-17,10;UBERON:0004178,9.54e-17,10;UBERON:0004573,1.38e-11,33;UBERON:0004571,1.38e-11,33;UBERON:0001135,1.58e-11,15;UBERON:0003834,2.74e-09,5;UBERON:0001533,2.74e-09,5;UBERON:0001637,2.82e-09,42;UBERON:0003509,2.82e-09,42;UBERON:0004572,2.82e-09,42;UBERON:0000947,1.59e-08,21;UBERON:0010191,1.59e-08,21;UBERON:0003513,5.38e-07,7;UBERON:0007500,8.16e-07,59;UBERON:0001981,8.16e-07,59;UBERON:0004537,8.16e-07,59;UBERON:0006965,8.16e-07,59 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,1.20538905604795,1.46062018077475,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.97364218096405,1.91542711029194,6.38198210490553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.19225442626881,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0.23056390438806,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:102742640..102742679,- | |||
}} |
Revision as of 15:23, 10 September 2013
Short description: | p@chr11:102742640..102742679, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:102742640..102742679, - |
Coexpression cluster: | C54_Dendritic_Macrophage_Monocytederived_CD14_leiomyoma_adipose_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immature conventional dendritic cell | 2.08e-27 | 5 |
common dendritic progenitor | 2.08e-27 | 5 |
conventional dendritic cell | 1.13e-18 | 8 |
aortic smooth muscle cell | 9.54e-17 | 10 |
dendritic cell | 1.74e-15 | 10 |
vascular associated smooth muscle cell | 6.35e-12 | 32 |
smooth muscle cell of the subclavian artery | 2.74e-09 | 5 |
smooth muscle cell | 4.45e-09 | 43 |
smooth muscle myoblast | 4.45e-09 | 43 |
muscle cell | 2.93e-07 | 55 |
muscle precursor cell | 6.40e-07 | 58 |
myoblast | 6.40e-07 | 58 |
multi-potent skeletal muscle stem cell | 6.40e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
blood vessel smooth muscle | 9.54e-17 | 10 |
arterial system smooth muscle | 9.54e-17 | 10 |
artery smooth muscle tissue | 9.54e-17 | 10 |
aorta smooth muscle tissue | 9.54e-17 | 10 |
systemic artery | 1.38e-11 | 33 |
systemic arterial system | 1.38e-11 | 33 |
smooth muscle tissue | 1.58e-11 | 15 |
thoracic segment blood vessel | 2.74e-09 | 5 |
subclavian artery | 2.74e-09 | 5 |
artery | 2.82e-09 | 42 |
arterial blood vessel | 2.82e-09 | 42 |
arterial system | 2.82e-09 | 42 |
aorta | 1.59e-08 | 21 |
aortic system | 1.59e-08 | 21 |
trunk blood vessel | 5.38e-07 | 7 |
epithelial tube open at both ends | 8.16e-07 | 59 |
blood vessel | 8.16e-07 | 59 |
blood vasculature | 8.16e-07 | 59 |
vascular cord | 8.16e-07 | 59 |
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