FFCP PHASE1:Hg19::chr11:70245655..70245668,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:70245655..70245668,-|id=chr11:70245655..70245668,-|ontology_enrichment_celltype=CL:0000066!3.86e-12!254;CL:0000076!2.91e-08!62|ontology_enrichment_celltype_v019=CL:0002535;1.54e-15;2!CL:0000076;1.64e-07;63|ontology_enrichment_celltype_v019_2=CL:0000076,2.04e-16,63;CL:0002535,1.78e-15,2|ontology_enrichment_development_v019=UBERON:0005425;3.16e-29;1!UBERON:0008814;2.37e-15;2!UBERON:0010056;2.37e-15;2!UBERON:0003056;1.09e-10;3|ontology_enrichment_disease=DOID:305!6.66e-23!106;DOID:0050687!1.16e-22!143;DOID:14566!6.44e-18!239;DOID:1749!3.12e-17!14;DOID:162!4.33e-17!235;DOID:7!1.41e-08!39;DOID:201!3.47e-07!6;DOID:0060100!3.47e-07!6|ontology_enrichment_disease_v019=DOID:1749;2.34e-72;14!DOID:4556;1.09e-10;3!DOID:4362;5.38e-07;5!DOID:3908;6.39e-07;5|ontology_enrichment_disease_v019_2=DOID:1749,2.65e-72,14;DOID:4556,1.20e-10,3;DOID:305,7.42e-10,106;DOID:0050687,2.42e-07,143;DOID:4362,5.70e-07,5;DOID:3908,6.77e-07,5|ontology_enrichment_uberon=UBERON:0003343!8.28e-08!4;UBERON:0004785!8.28e-08!4|ontology_enrichment_uberon_v019=UBERON:0000997;7.48e-30;1!UBERON:0005056;7.48e-30;1!UBERON:0004176;7.48e-30;1!UBERON:0000941;3.16e-29;1!UBERON:0001785;3.16e-29;1!UBERON:0002464;3.16e-29;1!UBERON:0004904;3.16e-29;1!UBERON:0001021;3.16e-29;1!UBERON:0006955;1.54e-15;2!UBERON:0004801;1.54e-15;2!UBERON:0003714;2.37e-15;2!UBERON:0005162;2.37e-15;2!UBERON:0000122;2.37e-15;2!UBERON:0001723;1.09e-10;3!UBERON:0001033;1.09e-10;3!UBERON:0003343;2.43e-08;4!UBERON:0004785;2.43e-08;4|ontology_enrichment_uberon_v019_2=UBERON:0000997,7.48e-30,1;UBERON:0005056,7.48e-30,1;UBERON:0000941,2.37e-29,1;UBERON:0001785,2.37e-29,1;UBERON:0002464,2.37e-29,1;UBERON:0004904,2.37e-29,1;UBERON:0001021,2.37e-29,1;UBERON:0003902,2.37e-29,1;UBERON:0005425,2.37e-29,1;UBERON:0006955,1.78e-15,2;UBERON:0004801,1.78e-15,2;UBERON:0003714,2.05e-15,2;UBERON:0005162,2.05e-15,2;UBERON:0000122,2.05e-15,2;UBERON:0001723,1.09e-10,3;UBERON:0001033,1.09e-10,3;UBERON:0010056,1.09e-10,3;UBERON:0001781,2.26e-08,4;UBERON:0003343,2.43e-08,4;UBERON:0004785,2.43e-08,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0.123121058076788,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0,0,0.581267877027924,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0.224262168690721,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.356857977594324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0.164254312027618,0,0,0.120859449591622,0,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0.835218521685727,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0,0,0.703347082052564,0,0,0,0,0,0,0,0,0,0.718946809178615,0.179021174675609,0,0,0,0,0,0,0,0,0.262379999988587,0,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0,0,0,0,0.41827123283581,0,0.113942055847001,0.69169171316418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0.586993856796269,0.485560759068186,0,0,0,0.126373159256976,0.450970258243478,0.103688191397247,0,0,0.313932918407225,0,0,0.138674673013139,0,4.01768829398948,2.00236175134926,0,0,0.483781656445426,0.146178634172371,0.164230914106418,0,0.0882561266915003,0,0,0,0.189932387867636,0,0.0801588202515337,0,0,0,0.114536596165916,0,0,0.49701014226173,0,0.271808412147228,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0.211200673038813,0,1.15149118391667,0,0,0,0,0,0,0,0.082092520749339,0,0.113312091520126,0,0,0,0,0,0.704815022316672,0,0,0,0,0,0,2.55336503108073,0,0,0,0,0,0,0.244052529803926,0.3755727921195,0,0,0,0,0.499921631848426,0.151649117541648,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0.428883182749851,0.521988583930423,0,0.694567422971502,0,0.179088841081487,0,0,0.530067437837643,0,0.168942440653073,0,0,0,0,0,0,0,0,0.245772908753719,0.633936370075881,0,0,0,0.567515953566836,0.920529751259204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,1.42769420259154,0.785181748008205,0.353909170043221,0.366857197043358,1.27078232765372,0.381382095467167,0.690359926060101,0,0,0,0,0,0.327543835020193,0.147856086217045,0,0,0.206686796501184,0,0,0,0,0,0.127762427639595,0.535701835878287,0,0,0,0,0,0.171488009437418,0,0,0.118193840883968,0.333694205676207,0,0,0,0,0.215927591218621,0,0,0,0.116241425368125,0,0,0,0,0,0,0.473328002922261,0.255640214277473,0,0.22910686854405,0,0,0,0.098150233615243,0.243835849964539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,2.11736923029415,0.401206833445841,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0.101988829741982,0.26721740526556,0.551369397209069,0.50141507858475,0,0,0,0,0,0,0,0,0.33639558774184,0,0,0,0,0,0.0717222053926763,0,0.325613074443898,0.106727345877715,0,0.179650404213174,0,0,0,0,0,0|short_description=p@chr11:70245655..70245668,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:70245655..70245668,- | |||
|id=chr11:70245655..70245668,- | |||
|ontology_enrichment_celltype=CL:0000066!3.86e-12!254;CL:0000076!2.91e-08!62 | |||
|ontology_enrichment_celltype_v019=CL:0002535;1.54e-15;2!CL:0000076;1.64e-07;63 | |||
|ontology_enrichment_celltype_v019_2=CL:0000076,2.04e-16,63;CL:0002535,1.78e-15,2 | |||
|ontology_enrichment_development_v019=UBERON:0005425;3.16e-29;1!UBERON:0008814;2.37e-15;2!UBERON:0010056;2.37e-15;2!UBERON:0003056;1.09e-10;3 | |||
|ontology_enrichment_disease=DOID:305!6.66e-23!106;DOID:0050687!1.16e-22!143;DOID:14566!6.44e-18!239;DOID:1749!3.12e-17!14;DOID:162!4.33e-17!235;DOID:7!1.41e-08!39;DOID:201!3.47e-07!6;DOID:0060100!3.47e-07!6 | |||
|ontology_enrichment_disease_v019=DOID:1749;2.34e-72;14!DOID:4556;1.09e-10;3!DOID:4362;5.38e-07;5!DOID:3908;6.39e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.65e-72,14;DOID:4556,1.20e-10,3;DOID:305,7.42e-10,106;DOID:0050687,2.42e-07,143;DOID:4362,5.70e-07,5;DOID:3908,6.77e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0003343!8.28e-08!4;UBERON:0004785!8.28e-08!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000997;7.48e-30;1!UBERON:0005056;7.48e-30;1!UBERON:0004176;7.48e-30;1!UBERON:0000941;3.16e-29;1!UBERON:0001785;3.16e-29;1!UBERON:0002464;3.16e-29;1!UBERON:0004904;3.16e-29;1!UBERON:0001021;3.16e-29;1!UBERON:0006955;1.54e-15;2!UBERON:0004801;1.54e-15;2!UBERON:0003714;2.37e-15;2!UBERON:0005162;2.37e-15;2!UBERON:0000122;2.37e-15;2!UBERON:0001723;1.09e-10;3!UBERON:0001033;1.09e-10;3!UBERON:0003343;2.43e-08;4!UBERON:0004785;2.43e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000997,7.48e-30,1;UBERON:0005056,7.48e-30,1;UBERON:0000941,2.37e-29,1;UBERON:0001785,2.37e-29,1;UBERON:0002464,2.37e-29,1;UBERON:0004904,2.37e-29,1;UBERON:0001021,2.37e-29,1;UBERON:0003902,2.37e-29,1;UBERON:0005425,2.37e-29,1;UBERON:0006955,1.78e-15,2;UBERON:0004801,1.78e-15,2;UBERON:0003714,2.05e-15,2;UBERON:0005162,2.05e-15,2;UBERON:0000122,2.05e-15,2;UBERON:0001723,1.09e-10,3;UBERON:0001033,1.09e-10,3;UBERON:0010056,1.09e-10,3;UBERON:0001781,2.26e-08,4;UBERON:0003343,2.43e-08,4;UBERON:0004785,2.43e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0.123121058076788,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0,0,0.581267877027924,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0.224262168690721,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.356857977594324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0.164254312027618,0,0,0.120859449591622,0,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0.835218521685727,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0,0,0.703347082052564,0,0,0,0,0,0,0,0,0,0.718946809178615,0.179021174675609,0,0,0,0,0,0,0,0,0.262379999988587,0,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0,0,0,0,0.41827123283581,0,0.113942055847001,0.69169171316418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0.586993856796269,0.485560759068186,0,0,0,0.126373159256976,0.450970258243478,0.103688191397247,0,0,0.313932918407225,0,0,0.138674673013139,0,4.01768829398948,2.00236175134926,0,0,0.483781656445426,0.146178634172371,0.164230914106418,0,0.0882561266915003,0,0,0,0.189932387867636,0,0.0801588202515337,0,0,0,0.114536596165916,0,0,0.49701014226173,0,0.271808412147228,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0.211200673038813,0,1.15149118391667,0,0,0,0,0,0,0,0.082092520749339,0,0.113312091520126,0,0,0,0,0,0.704815022316672,0,0,0,0,0,0,2.55336503108073,0,0,0,0,0,0,0.244052529803926,0.3755727921195,0,0,0,0,0.499921631848426,0.151649117541648,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0.428883182749851,0.521988583930423,0,0.694567422971502,0,0.179088841081487,0,0,0.530067437837643,0,0.168942440653073,0,0,0,0,0,0,0,0,0.245772908753719,0.633936370075881,0,0,0,0.567515953566836,0.920529751259204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,1.42769420259154,0.785181748008205,0.353909170043221,0.366857197043358,1.27078232765372,0.381382095467167,0.690359926060101,0,0,0,0,0,0.327543835020193,0.147856086217045,0,0,0.206686796501184,0,0,0,0,0,0.127762427639595,0.535701835878287,0,0,0,0,0,0.171488009437418,0,0,0.118193840883968,0.333694205676207,0,0,0,0,0.215927591218621,0,0,0,0.116241425368125,0,0,0,0,0,0,0.473328002922261,0.255640214277473,0,0.22910686854405,0,0,0,0.098150233615243,0.243835849964539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,2.11736923029415,0.401206833445841,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0.101988829741982,0.26721740526556,0.551369397209069,0.50141507858475,0,0,0,0,0,0,0,0,0.33639558774184,0,0,0,0,0,0.0717222053926763,0,0.325613074443898,0.106727345877715,0,0.179650404213174,0,0,0,0,0,0 | |||
|short_description=p@chr11:70245655..70245668,- | |||
}} |
Revision as of 19:26, 10 September 2013
Short description: | p@chr11:70245655..70245668, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:70245655..70245668, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
squamous epithelial cell | 2.04e-16 | 63 |
epithelial cell of cervix | 1.78e-15 | 2 |
Ontology term | p-value | n |
---|---|---|
mammalian vulva | 7.48e-30 | 1 |
external female genitalia | 7.48e-30 | 1 |
cranial nerve II | 2.37e-29 | 1 |
cranial nerve | 2.37e-29 | 1 |
nerve trunk | 2.37e-29 | 1 |
nerve connecting eye with brain | 2.37e-29 | 1 |
nerve | 2.37e-29 | 1 |
retinal neural layer | 2.37e-29 | 1 |
presumptive neural retina | 2.37e-29 | 1 |
uterine epithelium | 1.78e-15 | 2 |
cervix epithelium | 1.78e-15 | 2 |
neural tissue | 2.05e-15 | 2 |
multi cell component structure | 2.05e-15 | 2 |
neuron projection bundle | 2.05e-15 | 2 |
tongue | 1.09e-10 | 3 |
gustatory system | 1.09e-10 | 3 |
future tongue | 1.09e-10 | 3 |
layer of retina | 2.26e-08 | 4 |
mucosa of oral region | 2.43e-08 | 4 |
respiratory system mucosa | 2.43e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.65e-72 | 14 |
lung large cell carcinoma | 1.20e-10 | 3 |
carcinoma | 7.42e-10 | 106 |
cell type cancer | 2.42e-07 | 143 |
cervical cancer | 5.70e-07 | 5 |
non-small cell lung carcinoma | 6.77e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.