FFCP PHASE1:Hg19::chr11:62495935..62495989,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=283237 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28432 | |||
|TSSclassifier=S | |||
|UniProt=Q8N5M4 | |||
|association_with_transcript=0bp_to_NM_173810,uc001nuy.2_5end | |||
|description=CAGE_peak_1_at_TTC9C_5end | |||
|id=chr11:62495935..62495989,+ | |||
|ontology_enrichment_celltype=CL:0000055!6.08e-15!180;CL:0000192!1.43e-11!42;CL:0000514!1.43e-11!42;CL:0000183!2.19e-10!59;CL:0000187!7.96e-09!54;CL:0000359!8.20e-09!32;CL:0000222!1.30e-08!119;CL:0000680!2.18e-08!57;CL:0000056!2.18e-08!57;CL:0000355!2.18e-08!57;CL:0000393!3.21e-08!60;CL:0000211!3.21e-08!60;CL:1000497!2.43e-07!18;CL:0002518!2.43e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000192;4.70e-09;43!CL:0000359;2.27e-08;32!CL:1000497;5.92e-07;17!CL:0002518;5.92e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,5.36e-12,43;CL:0000514,5.36e-12,43;CL:0000187,3.40e-09,55;CL:0000222,7.04e-09,121;CL:0000359,8.20e-09,32;CL:0000680,9.58e-09,58;CL:0000056,9.58e-09,58;CL:0000355,9.58e-09,58;CL:0000393,1.43e-08,61;CL:0000211,1.43e-08,61;CL:1000497,6.66e-07,17;CL:0002518,6.66e-07,17 | |||
|ontology_enrichment_development_v019=CL:0000514;4.70e-09;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.65e-14!365;UBERON:0000481!1.70e-09!347;UBERON:0000119!3.84e-09!312;UBERON:0002100!9.04e-09!216;UBERON:0000483!9.38e-09!309;UBERON:0005256!3.52e-08!143;UBERON:0004290!3.03e-07!70;UBERON:0004111!6.00e-07!241;UBERON:0000477!8.08e-07!286;UBERON:0000025!8.90e-07!194 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,6.30e-11,160;UBERON:0009142,6.30e-11,160;UBERON:0000119,2.07e-09,309;UBERON:0000483,5.11e-09,306;UBERON:0002100,7.93e-09,199;UBERON:0007503,9.14e-09,78;UBERON:0007524,1.18e-07,73;UBERON:0002329,1.46e-07,71;UBERON:0003059,1.46e-07,71;UBERON:0007282,1.46e-07,71;UBERON:0004290,1.46e-07,71;UBERON:0009618,1.46e-07,71;UBERON:0003077,1.82e-07,72;UBERON:0007285,1.82e-07,72;UBERON:0001134,5.59e-07,62;UBERON:0002036,5.59e-07,62;UBERON:0003082,5.59e-07,62;UBERON:0004111,5.64e-07,240;UBERON:0005256,8.38e-07,122 | |||
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| |||
|short_description=p1@TTC9C | |||
}} |
Revision as of 18:35, 10 September 2013
Short description: | p1@TTC9C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_TTC9C_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_173810, uc001nuy.2_5end |
EntrezGene: | TTC9C |
HGNC: | 28432 |
UniProt: | Q8N5M4 |
Genome view: | ZENBU |
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CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 5.36e-12 | 43 |
smooth muscle myoblast | 5.36e-12 | 43 |
muscle cell | 3.40e-09 | 55 |
mesodermal cell | 7.04e-09 | 121 |
vascular associated smooth muscle cell | 8.20e-09 | 32 |
muscle precursor cell | 9.58e-09 | 58 |
myoblast | 9.58e-09 | 58 |
multi-potent skeletal muscle stem cell | 9.58e-09 | 58 |
electrically responsive cell | 1.43e-08 | 61 |
electrically active cell | 1.43e-08 | 61 |
kidney cell | 6.66e-07 | 17 |
kidney epithelial cell | 6.66e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
mesenchyme | 6.30e-11 | 160 |
entire embryonic mesenchyme | 6.30e-11 | 160 |
cell layer | 2.07e-09 | 309 |
epithelium | 5.11e-09 | 306 |
trunk | 7.93e-09 | 199 |
epithelial vesicle | 9.14e-09 | 78 |
dense mesenchyme tissue | 1.18e-07 | 73 |
somite | 1.46e-07 | 71 |
presomitic mesoderm | 1.46e-07 | 71 |
presumptive segmental plate | 1.46e-07 | 71 |
dermomyotome | 1.46e-07 | 71 |
trunk paraxial mesoderm | 1.46e-07 | 71 |
paraxial mesoderm | 1.82e-07 | 72 |
presumptive paraxial mesoderm | 1.82e-07 | 72 |
skeletal muscle tissue | 5.59e-07 | 62 |
striated muscle tissue | 5.59e-07 | 62 |
myotome | 5.59e-07 | 62 |
anatomical conduit | 5.64e-07 | 240 |
trunk mesenchyme | 8.38e-07 | 122 |
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