FFCP PHASE1:Hg19::chr11:62321754..62321778,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C489|description=CAGE_peak_at_chr11:62321754..62321778,+|id=chr11:62321754..62321778,+|ontology_enrichment_celltype=CL:0002057!1.10e-73!42;CL:0000860!9.22e-72!45;CL:0000557!2.01e-54!71;CL:0000766!4.61e-53!76;CL:0002009!2.09e-51!65;CL:0000839!2.57e-49!70;CL:0002194!3.65e-47!63;CL:0000576!3.65e-47!63;CL:0000040!3.65e-47!63;CL:0000559!3.65e-47!63;CL:0000738!2.12e-39!140;CL:0000763!5.43e-38!112;CL:0000049!5.43e-38!112;CL:0002031!5.83e-31!124;CL:0000037!1.86e-29!172;CL:0000566!1.86e-29!172;CL:0002087!3.61e-29!119;CL:0000988!4.55e-27!182;CL:0002032!1.36e-25!165;CL:0000837!1.36e-25!165;CL:0000134!6.29e-15!358;CL:0002320!2.44e-14!365;CL:0000219!1.21e-13!390;CL:0000048!4.61e-11!430;CL:0000034!7.05e-11!444;CL:0000723!1.08e-10!436;CL:0002393!2.27e-10!9;CL:0002397!2.27e-10!9;CL:0000767!1.70e-09!3;CL:0000842!1.96e-08!3;CL:0000063!2.00e-07!578;CL:0001014!8.97e-07!2;CL:0001016!8.97e-07!2|ontology_enrichment_celltype_v019=CL:0000860;6.44e-74;33!CL:0002057;6.44e-74;33!CL:0000473;7.74e-50;39!CL:0000234;7.74e-50;39!CL:0000576;5.99e-44;48!CL:0000766;2.76e-28;69!CL:0000767;5.31e-21;3!CL:0000763;1.82e-14;100!CL:0001014;2.46e-14;2!CL:0001016;2.46e-14;2!CL:0002087;4.74e-14;104!CL:0000738;5.87e-11;136!CL:0002393;6.92e-11;6!CL:0002397;6.92e-11;6!CL:0000094;3.48e-08;8|ontology_enrichment_celltype_v019_2=CL:0000860,8.01e-84,42;CL:0002057,8.01e-84,42;CL:0000473,8.55e-73,48;CL:0000234,8.55e-73,48;CL:0002009,1.02e-65,61;CL:0000766,6.17e-60,72;CL:0000557,1.65e-59,67;CL:0002194,2.39e-57,59;CL:0000576,2.39e-57,59;CL:0000040,2.39e-57,59;CL:0000559,2.39e-57,59;CL:0000839,6.88e-51,66;CL:0000763,3.25e-45,108;CL:0000049,3.25e-45,108;CL:0000738,1.10e-37,136;CL:0002031,2.26e-31,120;CL:0002087,4.72e-30,115;CL:0000037,1.33e-29,168;CL:0002032,8.47e-29,161;CL:0000837,8.47e-29,161;CL:0000988,7.54e-28,177;CL:0000767,4.97e-21,3;CL:0001014,2.31e-14,2;CL:0001016,2.31e-14,2;CL:0000134,2.29e-11,354;CL:0002320,4.82e-11,361;CL:0000219,6.67e-10,386;CL:0000034,6.18e-09,441;CL:0000048,1.67e-08,427;CL:0000723,2.60e-08,433;CL:0000094,3.40e-08,8;CL:0002393,2.14e-07,9;CL:0002397,2.14e-07,9|ontology_enrichment_development_v019=CL:0002057;2.02e-60;42!CL:0000049;9.32e-09;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!5.17e-47!80;UBERON:0001474!6.28e-43!86;UBERON:0002390!1.80e-40!102;UBERON:0003061!1.80e-40!102;UBERON:0004765!1.14e-38!101;UBERON:0001434!1.14e-38!101;UBERON:0002193!9.30e-36!112;UBERON:0002405!3.46e-29!115;UBERON:0002204!3.75e-22!167;UBERON:0003081!3.63e-18!216;UBERON:0002384!1.55e-13!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.23e-52,76;UBERON:0001474,6.56e-48,82;UBERON:0004765,2.77e-43,90;UBERON:0002390,9.87e-43,98;UBERON:0003061,9.87e-43,98;UBERON:0002405,9.44e-42,93;UBERON:0001434,1.57e-38,100;UBERON:0002193,2.27e-38,108;UBERON:0002204,3.04e-21,167;UBERON:0003081,3.28e-18,203;UBERON:0002384,1.33e-10,371;UBERON:0000926,5.85e-10,315;UBERON:0004120,5.85e-10,315;UBERON:0006603,5.85e-10,315|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.6208354749204,8.44424675813868,7.27635779585557,0,0,0,0,0,0,9.97191735357379,10.4283112684474,24.0882066494596,0,0,0,1.45398238779565,0,0.485168122375632,2.55671940596253,0.411167888021826,2.16794459626573,5.17846306179871,1.0246428261164,1.18241114944293,5.86067657252252,1.29096936716765,0,1.69418105588344,0.545812300115692,0.224723484445085,5.81559395504715,3.85114832491312,1.27867425159808,0,0.797854630486527,0.426224750532694,5.22376629531451,3.40431134814684,3.73693349397345,1.25624332628372,2.08593167368081,1.73751075764093,2.42159801053347,8.10210799172642,3.48108626184973,0.422510572623884,0.425208599930087,0.838634582033504,0.561643155732475,0.600707571366025,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0.125118519871964,0.554128230968366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621984346622316,0.720599767084807,0.50496973370552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0,0.77005821767849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,1.50999940573032,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C489 | |||
|description=CAGE_peak_at_chr11:62321754..62321778,+ | |||
|id=chr11:62321754..62321778,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.10e-73!42;CL:0000860!9.22e-72!45;CL:0000557!2.01e-54!71;CL:0000766!4.61e-53!76;CL:0002009!2.09e-51!65;CL:0000839!2.57e-49!70;CL:0002194!3.65e-47!63;CL:0000576!3.65e-47!63;CL:0000040!3.65e-47!63;CL:0000559!3.65e-47!63;CL:0000738!2.12e-39!140;CL:0000763!5.43e-38!112;CL:0000049!5.43e-38!112;CL:0002031!5.83e-31!124;CL:0000037!1.86e-29!172;CL:0000566!1.86e-29!172;CL:0002087!3.61e-29!119;CL:0000988!4.55e-27!182;CL:0002032!1.36e-25!165;CL:0000837!1.36e-25!165;CL:0000134!6.29e-15!358;CL:0002320!2.44e-14!365;CL:0000219!1.21e-13!390;CL:0000048!4.61e-11!430;CL:0000034!7.05e-11!444;CL:0000723!1.08e-10!436;CL:0002393!2.27e-10!9;CL:0002397!2.27e-10!9;CL:0000767!1.70e-09!3;CL:0000842!1.96e-08!3;CL:0000063!2.00e-07!578;CL:0001014!8.97e-07!2;CL:0001016!8.97e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.44e-74;33!CL:0002057;6.44e-74;33!CL:0000473;7.74e-50;39!CL:0000234;7.74e-50;39!CL:0000576;5.99e-44;48!CL:0000766;2.76e-28;69!CL:0000767;5.31e-21;3!CL:0000763;1.82e-14;100!CL:0001014;2.46e-14;2!CL:0001016;2.46e-14;2!CL:0002087;4.74e-14;104!CL:0000738;5.87e-11;136!CL:0002393;6.92e-11;6!CL:0002397;6.92e-11;6!CL:0000094;3.48e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.01e-84,42;CL:0002057,8.01e-84,42;CL:0000473,8.55e-73,48;CL:0000234,8.55e-73,48;CL:0002009,1.02e-65,61;CL:0000766,6.17e-60,72;CL:0000557,1.65e-59,67;CL:0002194,2.39e-57,59;CL:0000576,2.39e-57,59;CL:0000040,2.39e-57,59;CL:0000559,2.39e-57,59;CL:0000839,6.88e-51,66;CL:0000763,3.25e-45,108;CL:0000049,3.25e-45,108;CL:0000738,1.10e-37,136;CL:0002031,2.26e-31,120;CL:0002087,4.72e-30,115;CL:0000037,1.33e-29,168;CL:0002032,8.47e-29,161;CL:0000837,8.47e-29,161;CL:0000988,7.54e-28,177;CL:0000767,4.97e-21,3;CL:0001014,2.31e-14,2;CL:0001016,2.31e-14,2;CL:0000134,2.29e-11,354;CL:0002320,4.82e-11,361;CL:0000219,6.67e-10,386;CL:0000034,6.18e-09,441;CL:0000048,1.67e-08,427;CL:0000723,2.60e-08,433;CL:0000094,3.40e-08,8;CL:0002393,2.14e-07,9;CL:0002397,2.14e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;2.02e-60;42!CL:0000049;9.32e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.17e-47!80;UBERON:0001474!6.28e-43!86;UBERON:0002390!1.80e-40!102;UBERON:0003061!1.80e-40!102;UBERON:0004765!1.14e-38!101;UBERON:0001434!1.14e-38!101;UBERON:0002193!9.30e-36!112;UBERON:0002405!3.46e-29!115;UBERON:0002204!3.75e-22!167;UBERON:0003081!3.63e-18!216;UBERON:0002384!1.55e-13!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.23e-52,76;UBERON:0001474,6.56e-48,82;UBERON:0004765,2.77e-43,90;UBERON:0002390,9.87e-43,98;UBERON:0003061,9.87e-43,98;UBERON:0002405,9.44e-42,93;UBERON:0001434,1.57e-38,100;UBERON:0002193,2.27e-38,108;UBERON:0002204,3.04e-21,167;UBERON:0003081,3.28e-18,203;UBERON:0002384,1.33e-10,371;UBERON:0000926,5.85e-10,315;UBERON:0004120,5.85e-10,315;UBERON:0006603,5.85e-10,315 | |||
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|short_description=p@chr11:62321754..62321778,+ | |||
}} |
Revision as of 18:31, 10 September 2013
Short description: | p@chr11:62321754..62321778, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:62321754..62321778, + |
Coexpression cluster: | C489_immature_CD14_Natural_Basophils_CD8_CD4_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.23e-52 | 76 |
bone element | 6.56e-48 | 82 |
skeletal element | 2.77e-43 | 90 |
hematopoietic system | 9.87e-43 | 98 |
blood island | 9.87e-43 | 98 |
immune system | 9.44e-42 | 93 |
skeletal system | 1.57e-38 | 100 |
hemolymphoid system | 2.27e-38 | 108 |
musculoskeletal system | 3.04e-21 | 167 |
lateral plate mesoderm | 3.28e-18 | 203 |
connective tissue | 1.33e-10 | 371 |
mesoderm | 5.85e-10 | 315 |
mesoderm-derived structure | 5.85e-10 | 315 |
presumptive mesoderm | 5.85e-10 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.