FFCP PHASE1:Hg19::chr11:58345474..58345491,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9404|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=14061|TSSclassifier=S|UniProt=|association_with_transcript=201bp_to_ENST00000528489,uc010rkk.1_5end|coexpression_cluster_id=C75|description=CAGE_peak_3_at_LPXN_5end|id=chr11:58345474..58345491,-|ontology_enrichment_celltype=CL:0000738!7.47e-42!140;CL:0002031!9.24e-35!124;CL:0000037!1.83e-33!172;CL:0000566!1.83e-33!172;CL:0002087!6.95e-33!119;CL:0000988!4.33e-31!182;CL:0002032!1.33e-29!165;CL:0000837!1.33e-29!165;CL:0000860!2.63e-24!45;CL:0002057!3.83e-23!42;CL:0000766!2.65e-20!76;CL:0000557!2.04e-17!71;CL:0000839!2.88e-17!70;CL:0002009!5.79e-17!65;CL:0000838!9.13e-16!52;CL:0002194!1.01e-15!63;CL:0000576!1.01e-15!63;CL:0000040!1.01e-15!63;CL:0000559!1.01e-15!63;CL:0000542!4.49e-15!53;CL:0000051!4.49e-15!53;CL:0000763!1.12e-14!112;CL:0000049!1.12e-14!112;CL:0000945!7.37e-09!24;CL:0000826!7.37e-09!24;CL:0000063!1.31e-08!578;CL:0000791!8.79e-08!18;CL:0000789!8.79e-08!18;CL:0002420!8.79e-08!18;CL:0002419!8.79e-08!18;CL:0000790!8.79e-08!18;CL:0000134!1.10e-07!358;CL:0002320!6.72e-07!365|ontology_enrichment_celltype_v019=CL:0000860;1.35e-27;33!CL:0002057;1.35e-27;33!CL:0000576;2.44e-19;48!CL:0000473;1.80e-18;39!CL:0000234;1.80e-18;39!CL:0000766;8.42e-17;69!CL:0002087;3.13e-15;104!CL:0000624;2.51e-12;6!CL:0000738;1.33e-11;136!CL:0002393;5.16e-11;6!CL:0002397;5.16e-11;6!CL:0000791;6.16e-11;18!CL:0000789;6.16e-11;18!CL:0002419;6.16e-11;18!CL:0000094;6.77e-11;8!CL:0000081;8.68e-10;11!CL:0000542;9.33e-10;53!CL:0000084;2.51e-08;25!CL:0000988;1.03e-07;177!CL:0000623;4.20e-07;3!CL:0000219;4.30e-07;193!CL:0000898;8.16e-07;3|ontology_enrichment_celltype_v019_2=CL:0000738,1.30e-58,136;CL:0002031,5.12e-45,120;CL:0000037,1.57e-44,168;CL:0002087,5.60e-44,115;CL:0000988,1.39e-42,177;CL:0002032,2.32e-38,161;CL:0000837,2.32e-38,161;CL:0000860,2.57e-35,42;CL:0002057,2.57e-35,42;CL:0000766,5.81e-34,72;CL:0000473,1.38e-29,48;CL:0000234,1.38e-29,48;CL:0000557,1.01e-27,67;CL:0002009,8.50e-26,61;CL:0000839,1.42e-24,66;CL:0002194,3.38e-23,59;CL:0000576,3.38e-23,59;CL:0000040,3.38e-23,59;CL:0000559,3.38e-23,59;CL:0000763,6.79e-21,108;CL:0000049,6.79e-21,108;CL:0000838,6.71e-17,52;CL:0000542,1.98e-16,53;CL:0000051,1.98e-16,53;CL:0000134,4.49e-15,354;CL:0002320,2.39e-14,361;CL:0000624,2.54e-12,6;CL:0000219,8.09e-12,386;CL:0000094,5.44e-11,8;CL:0000791,5.58e-11,18;CL:0000789,5.58e-11,18;CL:0002420,5.58e-11,18;CL:0002419,5.58e-11,18;CL:0000790,5.58e-11,18;CL:0000081,7.20e-10,11;CL:0000034,2.54e-09,441;CL:0000048,2.97e-09,427;CL:0000723,7.77e-09,433;CL:0000084,2.51e-08,25;CL:0000827,2.51e-08,25;CL:0000623,4.22e-07,3;CL:0000825,4.22e-07,3;CL:0002393,5.42e-07,9;CL:0002397,5.42e-07,9;CL:0000236,6.88e-07,14;CL:0000898,8.20e-07,3|ontology_enrichment_development_v019=CL:0002057;3.86e-25;42!CL:0000790;6.16e-11;18!CL:0000051;9.33e-10;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.71e-17!102;UBERON:0003061!1.71e-17!102;UBERON:0002371!3.52e-16!80;UBERON:0002193!1.83e-15!112;UBERON:0001474!3.18e-14!86;UBERON:0002405!4.31e-12!115;UBERON:0004765!7.79e-11!101;UBERON:0001434!7.79e-11!101|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.64e-26,76;UBERON:0002390,4.37e-24,98;UBERON:0003061,4.37e-24,98;UBERON:0001474,3.95e-23,82;UBERON:0002193,1.28e-20,108;UBERON:0002405,2.29e-20,93;UBERON:0004765,5.08e-20,90;UBERON:0001434,7.38e-17,100;UBERON:0002384,2.31e-13,371;UBERON:0002204,6.32e-07,167|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0.263766978228454,0.247532705920093,0,0,0,0,0.487932798790507,0,0,0,0,0,0,2.36881557818649,3.44822475689772,2.04648031415566,15.3412067971073,9.21190555433311,9.13415127564848,0.919421224478927,1.204823675113,2.58827807116751,0.387336002901508,0.853015394924529,1.46800219667424,21.6058209327432,17.046278034962,19.096956622995,0,0,0,1.01778767145695,0.377875943688809,0.485168122375632,0.697287110717054,1.23350366406548,2.47765096716083,4.02769349251011,2.81776777182011,4.96612682766029,11.0318617835718,7.74581620300591,14.8969135253776,1.12945403725563,1.09162460023138,1.79778787556068,5.50951006267625,7.70229664982625,8.31138263538754,0.989553900560148,1.39624560335142,1.70489900213078,3.77272010217159,2.8369261234557,1.24564449799115,4.01997864410789,3.12889751052121,3.25783267057675,0.605399502633369,3.31449872388808,5.06339819905415,2.32380814943136,4.03948169933583,2.72556239160889,1.23561494261145,0.901061357049038,1.6072558669708,0.855038231223746,0.99458338599545,0.182664153764634,0,0.546138611262131,1.77901850772711,5.12076267079809,0.800791974072025,1.72425731986345,0.661044872784862,1.90810750907073,27.3222225172535,18.2043528704991,19.8782078625119,5.28685314316103,7.28661131875997,0.263384084775077,35.2110488503761,37.7290332239198,51.4003747498773,0.668745981562712,20.5331027979162,11.3627473376336,11.6896037044747,2.89667187901451,12.3734481139432,3.32300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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9404 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14061 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=201bp_to_ENST00000528489,uc010rkk.1_5end | |||
|coexpression_cluster_id=C75 | |||
|description=CAGE_peak_3_at_LPXN_5end | |||
|id=chr11:58345474..58345491,- | |||
|ontology_enrichment_celltype=CL:0000738!7.47e-42!140;CL:0002031!9.24e-35!124;CL:0000037!1.83e-33!172;CL:0000566!1.83e-33!172;CL:0002087!6.95e-33!119;CL:0000988!4.33e-31!182;CL:0002032!1.33e-29!165;CL:0000837!1.33e-29!165;CL:0000860!2.63e-24!45;CL:0002057!3.83e-23!42;CL:0000766!2.65e-20!76;CL:0000557!2.04e-17!71;CL:0000839!2.88e-17!70;CL:0002009!5.79e-17!65;CL:0000838!9.13e-16!52;CL:0002194!1.01e-15!63;CL:0000576!1.01e-15!63;CL:0000040!1.01e-15!63;CL:0000559!1.01e-15!63;CL:0000542!4.49e-15!53;CL:0000051!4.49e-15!53;CL:0000763!1.12e-14!112;CL:0000049!1.12e-14!112;CL:0000945!7.37e-09!24;CL:0000826!7.37e-09!24;CL:0000063!1.31e-08!578;CL:0000791!8.79e-08!18;CL:0000789!8.79e-08!18;CL:0002420!8.79e-08!18;CL:0002419!8.79e-08!18;CL:0000790!8.79e-08!18;CL:0000134!1.10e-07!358;CL:0002320!6.72e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.35e-27;33!CL:0002057;1.35e-27;33!CL:0000576;2.44e-19;48!CL:0000473;1.80e-18;39!CL:0000234;1.80e-18;39!CL:0000766;8.42e-17;69!CL:0002087;3.13e-15;104!CL:0000624;2.51e-12;6!CL:0000738;1.33e-11;136!CL:0002393;5.16e-11;6!CL:0002397;5.16e-11;6!CL:0000791;6.16e-11;18!CL:0000789;6.16e-11;18!CL:0002419;6.16e-11;18!CL:0000094;6.77e-11;8!CL:0000081;8.68e-10;11!CL:0000542;9.33e-10;53!CL:0000084;2.51e-08;25!CL:0000988;1.03e-07;177!CL:0000623;4.20e-07;3!CL:0000219;4.30e-07;193!CL:0000898;8.16e-07;3 | |||
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|ontology_enrichment_development_v019=CL:0002057;3.86e-25;42!CL:0000790;6.16e-11;18!CL:0000051;9.33e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.71e-17!102;UBERON:0003061!1.71e-17!102;UBERON:0002371!3.52e-16!80;UBERON:0002193!1.83e-15!112;UBERON:0001474!3.18e-14!86;UBERON:0002405!4.31e-12!115;UBERON:0004765!7.79e-11!101;UBERON:0001434!7.79e-11!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.64e-26,76;UBERON:0002390,4.37e-24,98;UBERON:0003061,4.37e-24,98;UBERON:0001474,3.95e-23,82;UBERON:0002193,1.28e-20,108;UBERON:0002405,2.29e-20,93;UBERON:0004765,5.08e-20,90;UBERON:0001434,7.38e-17,100;UBERON:0002384,2.31e-13,371;UBERON:0002204,6.32e-07,167 | |||
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| |||
|short_description=p3@LPXN | |||
}} |
Revision as of 18:12, 10 September 2013
Short description: | p3@LPXN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_LPXN_5end |
Coexpression cluster: | C75_Eosinophils_Natural_CD8_Basophils_CD14_CD4_Peripheral |
Association with transcript: | 201bp_to_ENST00000528489, uc010rkk.1_5end |
EntrezGene: | LPXN |
HGNC: | 14061 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.64e-26 | 76 |
hematopoietic system | 4.37e-24 | 98 |
blood island | 4.37e-24 | 98 |
bone element | 3.95e-23 | 82 |
hemolymphoid system | 1.28e-20 | 108 |
immune system | 2.29e-20 | 93 |
skeletal element | 5.08e-20 | 90 |
skeletal system | 7.38e-17 | 100 |
connective tissue | 2.31e-13 | 371 |
musculoskeletal system | 6.32e-07 | 167 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.