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FFCP PHASE1:Hg19::chr11:35211437..35211460,+: Difference between revisions

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{{FFCP
{{FFCP|DPIdataset=robustDPI|EntrezGene=960|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1681|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000533222_5end|coexpression_cluster_id=C620|description=CAGE_peak_8_at_CD44_5end|id=chr11:35211437..35211460,+|ontology_enrichment_celltype=CL:0002057!1.44e-17!42;CL:0000860!9.47e-17!45;CL:0000839!1.56e-16!70;CL:0000557!2.32e-16!71;CL:0002194!2.00e-15!63;CL:0000576!2.00e-15!63;CL:0000040!2.00e-15!63;CL:0000559!2.00e-15!63;CL:0000766!3.79e-15!76;CL:0002009!5.81e-15!65;CL:0002371!8.16e-09!591;CL:0002031!1.81e-07!124;CL:0000144!2.25e-07!625;CL:0000763!8.23e-07!112;CL:0000049!8.23e-07!112|ontology_enrichment_celltype_v019=CL:0000860;2.69e-19;33!CL:0002057;2.69e-19;33!CL:0000473;3.89e-16;39!CL:0000234;3.89e-16;39!CL:0000576;1.28e-09;48!CL:0000766;1.82e-08;69|ontology_enrichment_celltype_v019_2=CL:0000473,3.36e-19,48;CL:0000234,3.36e-19,48;CL:0000860,1.11e-18,42;CL:0002057,1.11e-18,42;CL:0000557,1.67e-17,67;CL:0000839,3.89e-17,66;CL:0000766,3.12e-16,72;CL:0002194,5.90e-16,59;CL:0000576,5.90e-16,59;CL:0000040,5.90e-16,59;CL:0000559,5.90e-16,59;CL:0002009,1.11e-15,61;CL:0000763,7.01e-08,108;CL:0000049,7.01e-08,108;CL:0000723,4.53e-07,433;CL:0000048,7.49e-07,427|ontology_enrichment_development_v019=CL:0002057;4.25e-14;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002204!2.08e-14!167;UBERON:0002371!7.28e-14!80;UBERON:0004765!5.19e-12!101;UBERON:0001434!5.19e-12!101;UBERON:0001474!2.62e-11!86;UBERON:0002390!6.00e-10!102;UBERON:0003061!6.00e-10!102;UBERON:0002193!1.40e-07!112|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002204,3.60e-16,167;UBERON:0002371,1.57e-15,76;UBERON:0004765,4.73e-14,90;UBERON:0001434,1.60e-13,100;UBERON:0001474,3.64e-13,82;UBERON:0002390,1.57e-10,98;UBERON:0003061,1.57e-10,98;UBERON:0002405,2.92e-09,93;UBERON:0002193,8.04e-08,108;UBERON:0000926,1.62e-07,315;UBERON:0004120,1.62e-07,315;UBERON:0006603,1.62e-07,315|phase1_expression=0,2.5692062866918,0.422863212287913,2.00146596706261,0,1.74467704820074,0,0.631719873426831,2.08948502559871,1.22866968250754,0.697801167972428,0.218441372130172,0,2.84662611808107,2.65117900582333,5.3786011716142,5.42425075221579,5.11217063271161,2.92759679274304,1.35433163884467,1.22400414746552,0.313454721478088,0.85870796139317,3.01123735160345,1.25542639594803,0.916960868975415,0.328402357799783,0.787107813136792,0.393364276848904,0,1.70297735647684,1.83884244895785,0.30120591877825,4.43704812200145,0,0,0,1.66198622559563,5.01361118675354,2.82114131930607,0.671746422719773,0.647787332037959,1.28787783817093,11.6318591023652,6.42389104270976,7.03493777444667,15.8051745095866,11.1015329765893,10.5300166104335,13.5215424391411,11.0149103807513,7.33094912654614,11.0318617835718,7.10033151942209,14.8969135253776,14.4946601447806,10.9162460023138,8.98893937780339,22.9562919278177,5.45579346029359,12.1474053901818,9.56568770541477,7.57961898962201,9.80316926225197,23.5069483289153,9.07816359505824,19.9303119678584,11.8086872670669,18.7733850631273,6.73285418585862,21.1889825921679,8.83866326370155,15.8231193720442,2.95757400836718,2.12604299965044,0.209658645508376,1.68492946719743,0.901061357049038,2.89306056054744,0.285012743741249,1.19350006319454,0.730656615058536,0,0,0,0.426730222566507,0.400395987036012,0,0.661044872784862,0,1.1384259382189,1.17447437874188,0.764546456250458,0,0.560508562981536,0.526768169550154,0.393419540227666,6.6811829667358,4.93443597598822,1.00311897234407,1.30368906653436,0.473447805734733,0,2.1167986808183,1.47302953737419,0.886135578334485,2.16643091012012,1.15282187753108,1.56071217071854,1.97325485524411,1.65810010671509,1.44901542867526,1.92772532110679,1.07016331235885,2.09071047609954,0.906474741580529,1.53288197440768,1.03088233644789,0.759059076058509,0.637130828648193,0.651083453856419,1.90090408889675,1.35517607169996,0.895906278080929,1.24930726552346,1.4206635122641,1.64225599384209,0.80642697289893,4.27904313253612,1.30341963494519,7.31420598941885,0,0.383587685530591,2.53007406669196,1.00267582127178,3.62116297402059,2.3858578411533,2.91980922181582,0.945348171640679,0.886917589850256,0.614843499851882,0.261958150995425,1.09288586487763,2.96627554227544,1.9472843619281,1.56716763569341,5.58423434179234,0.715471872916026,0,0.371457501329565,0,1.72046919021225,0.347140501607594,1.13061588384802,1.67799774483962,1.37559020970034,1.25396979922086,0,0,0,0,2.28081631715554,0,0.367663080345869,0,0,0,0,0,0,0,1.31780417436063,0,1.3082821564276,1.49091585508596,2.15271869829786,1.45650098894541,8.89193524321323,2.12801029319014,3.36406560085384,0,2.71334303258876,0,1.61652806483626,0.817309515567294,0.302714855289863,0.576175924479999,0.70296429550139,1.5608003841516,0,1.19558944441441,1.29177948508141,0.809364721840658,1.54495887372473,0.816616685019573,1.22834317311768,2.27316718586684,1.18800285728205,2.22540236350701,0.910161361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|DPIdataset=robustDPI
|EntrezGene=960
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=1681
|TSSclassifier=S
|UniProt=
|association_with_transcript=0bp_to_ENST00000533222_5end
|coexpression_cluster_id=C620
|description=CAGE_peak_8_at_CD44_5end
|id=chr11:35211437..35211460,+
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|short_description=p8@CD44
}}

Revision as of 17:37, 10 September 2013

Short description:p8@CD44
Species:Human (Homo sapiens)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_8_at_CD44_5end
Coexpression cluster:C620_CD14_Smooth_Fibroblast_Mast_signet_normal_meningioma
Association with transcript: 0bp_to_ENST00000533222_5end
EntrezGene:CD44
HGNC: 1681
UniProt: NA
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data









Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.