FFCP PHASE1:Hg19::chr11:22688630..22688642,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2620|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4167|TSSclassifier=S|UniProt=E9PQ37|association_with_transcript=8bp_to_ENST00000533363_5end|coexpression_cluster_id=C3134|description=CAGE_peak_13_at_GAS2_5end|id=chr11:22688630..22688642,+|ontology_enrichment_celltype=CL:0000181!9.75e-07!12;CL:0000417!9.75e-07!12;CL:0000668!9.75e-07!12;CL:0000414!9.75e-07!12;CL:0000412!9.75e-07!12;CL:0000182!9.75e-07!12|ontology_enrichment_celltype_v019=CL:0000182;5.56e-12;12!CL:0000945;1.43e-10;24|ontology_enrichment_celltype_v019_2=CL:0000182,5.25e-12,12;CL:0000945,1.31e-10,24;CL:0000826,1.31e-10,24|ontology_enrichment_development_v019=UBERON:0004161;2.34e-22;11!UBERON:0009497;5.56e-19;13!UBERON:0001041;9.41e-13;30!UBERON:0003104;4.52e-08;31|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:2355;2.25e-16;1!DOID:74;7.49e-09;2|ontology_enrichment_disease_v019_2=DOID:2355,1.93e-16,1;DOID:74,6.94e-09,2|ontology_enrichment_uberon=UBERON:0001896!9.20e-15!3;UBERON:0005290!9.20e-15!3;UBERON:0010096!9.20e-15!3;UBERON:0002298!1.19e-14!8;UBERON:0003076!1.29e-14!15;UBERON:0003057!1.29e-14!15;UBERON:0005057!9.50e-11!26;UBERON:0002148!1.53e-10!2;UBERON:0009662!1.53e-10!2;UBERON:0002368!1.06e-09!35;UBERON:0004733!1.09e-09!12;UBERON:0002028!1.09e-09!12;UBERON:0007277!1.09e-09!12;UBERON:0004732!6.34e-09!13;UBERON:0002107!7.18e-09!19;UBERON:0006925!7.18e-09!19;UBERON:0008836!7.18e-09!19;UBERON:0001049!9.79e-08!57;UBERON:0005068!9.79e-08!57;UBERON:0006241!9.79e-08!57;UBERON:0007135!9.79e-08!57;UBERON:0008835!1.42e-07!22;UBERON:0003894!1.42e-07!22;UBERON:0000988!2.66e-07!3;UBERON:0006331!2.66e-07!3;UBERON:0002240!2.74e-07!3;UBERON:0003978!2.83e-07!3;UBERON:0009751!2.83e-07!3;UBERON:0000946!2.83e-07!3;UBERON:0002523!2.83e-07!3;UBERON:0005983!2.83e-07!3;UBERON:0002165!2.83e-07!3;UBERON:0002062!2.83e-07!3;UBERON:0007280!2.83e-07!3;UBERON:0009854!3.24e-07!23;UBERON:0000949!3.32e-07!45|ontology_enrichment_uberon_v019=UBERON:0002107;4.21e-13;19!UBERON:0006925;4.21e-13;19!UBERON:0002423;4.97e-10;25!UBERON:0002368;2.04e-07;33!UBERON:0002365;2.04e-07;31!UBERON:0002330;2.04e-07;31|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.95e-13,19;UBERON:0006925,3.95e-13,19;UBERON:0008836,3.95e-13,19;UBERON:0008835,2.21e-11,22;UBERON:0003894,2.21e-11,22;UBERON:0009854,6.71e-11,23;UBERON:0007499,4.74e-10,25;UBERON:0009497,4.74e-10,25;UBERON:0000015,4.74e-10,25;UBERON:0002423,4.74e-10,25;UBERON:0006235,4.74e-10,25;UBERON:0004161,4.74e-10,25;UBERON:0009856,1.13e-09,26;UBERON:0002365,3.73e-08,31;UBERON:0002330,3.73e-08,31;UBERON:0002368,3.01e-07,35|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.67446920117829,3.20192298854788,3.85682828437028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0.290033387828457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369254416383208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,3.08870996151536,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0.201550417460179,0,0,1.26053091691558,1.97798060114799,2.35912403489647,0.0984274815147488,1.94748663751304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0.439656701034247,2.65013777824443,0.129282956361551,0.52893040697076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14681839138014,0.110929051536852,0.124192805882767,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.08629926763095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.77407108916684,0,0,0,0,0,0.196308467114945,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193766729508018,0.062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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2620 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4167 | |||
|TSSclassifier=S | |||
|UniProt=E9PQ37 | |||
|association_with_transcript=8bp_to_ENST00000533363_5end | |||
|coexpression_cluster_id=C3134 | |||
|description=CAGE_peak_13_at_GAS2_5end | |||
|id=chr11:22688630..22688642,+ | |||
|ontology_enrichment_celltype=CL:0000181!9.75e-07!12;CL:0000417!9.75e-07!12;CL:0000668!9.75e-07!12;CL:0000414!9.75e-07!12;CL:0000412!9.75e-07!12;CL:0000182!9.75e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;5.56e-12;12!CL:0000945;1.43e-10;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.25e-12,12;CL:0000945,1.31e-10,24;CL:0000826,1.31e-10,24 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.34e-22;11!UBERON:0009497;5.56e-19;13!UBERON:0001041;9.41e-13;30!UBERON:0003104;4.52e-08;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2355;2.25e-16;1!DOID:74;7.49e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,1.93e-16,1;DOID:74,6.94e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0001896!9.20e-15!3;UBERON:0005290!9.20e-15!3;UBERON:0010096!9.20e-15!3;UBERON:0002298!1.19e-14!8;UBERON:0003076!1.29e-14!15;UBERON:0003057!1.29e-14!15;UBERON:0005057!9.50e-11!26;UBERON:0002148!1.53e-10!2;UBERON:0009662!1.53e-10!2;UBERON:0002368!1.06e-09!35;UBERON:0004733!1.09e-09!12;UBERON:0002028!1.09e-09!12;UBERON:0007277!1.09e-09!12;UBERON:0004732!6.34e-09!13;UBERON:0002107!7.18e-09!19;UBERON:0006925!7.18e-09!19;UBERON:0008836!7.18e-09!19;UBERON:0001049!9.79e-08!57;UBERON:0005068!9.79e-08!57;UBERON:0006241!9.79e-08!57;UBERON:0007135!9.79e-08!57;UBERON:0008835!1.42e-07!22;UBERON:0003894!1.42e-07!22;UBERON:0000988!2.66e-07!3;UBERON:0006331!2.66e-07!3;UBERON:0002240!2.74e-07!3;UBERON:0003978!2.83e-07!3;UBERON:0009751!2.83e-07!3;UBERON:0000946!2.83e-07!3;UBERON:0002523!2.83e-07!3;UBERON:0005983!2.83e-07!3;UBERON:0002165!2.83e-07!3;UBERON:0002062!2.83e-07!3;UBERON:0007280!2.83e-07!3;UBERON:0009854!3.24e-07!23;UBERON:0000949!3.32e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;4.21e-13;19!UBERON:0006925;4.21e-13;19!UBERON:0002423;4.97e-10;25!UBERON:0002368;2.04e-07;33!UBERON:0002365;2.04e-07;31!UBERON:0002330;2.04e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.95e-13,19;UBERON:0006925,3.95e-13,19;UBERON:0008836,3.95e-13,19;UBERON:0008835,2.21e-11,22;UBERON:0003894,2.21e-11,22;UBERON:0009854,6.71e-11,23;UBERON:0007499,4.74e-10,25;UBERON:0009497,4.74e-10,25;UBERON:0000015,4.74e-10,25;UBERON:0002423,4.74e-10,25;UBERON:0006235,4.74e-10,25;UBERON:0004161,4.74e-10,25;UBERON:0009856,1.13e-09,26;UBERON:0002365,3.73e-08,31;UBERON:0002330,3.73e-08,31;UBERON:0002368,3.01e-07,35 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.67446920117829,3.20192298854788,3.85682828437028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0.290033387828457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369254416383208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,3.08870996151536,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0.201550417460179,0,0,1.26053091691558,1.97798060114799,2.35912403489647,0.0984274815147488,1.94748663751304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0.439656701034247,2.65013777824443,0.129282956361551,0.52893040697076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14681839138014,0.110929051536852,0.124192805882767,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.08629926763095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.77407108916684,0,0,0,0,0,0.196308467114945,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193766729508018,0.0620747142958579,0,0,0,0,0.684466602170562,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p13@GAS2 | |||
}} |
Revision as of 17:15, 10 September 2013
Short description: | p13@GAS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_GAS2_5end |
Coexpression cluster: | C3134_small_B_rhabdomyosarcoma_gastrointestinal_hereditary_liver_hepatocellular |
Association with transcript: | 8bp_to_ENST00000533363_5end |
EntrezGene: | GAS2 |
HGNC: | 4167 |
UniProt: | E9PQ37 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.25e-12 | 12 |
lymphocyte of B lineage | 1.31e-10 | 24 |
pro-B cell | 1.31e-10 | 24 |
Ontology term | p-value | n |
---|---|---|
liver | 3.95e-13 | 19 |
digestive gland | 3.95e-13 | 19 |
liver bud | 3.95e-13 | 19 |
hepatic diverticulum | 2.21e-11 | 22 |
liver primordium | 2.21e-11 | 22 |
digestive tract diverticulum | 6.71e-11 | 23 |
epithelial sac | 4.74e-10 | 25 |
epithelium of foregut-midgut junction | 4.74e-10 | 25 |
anatomical boundary | 4.74e-10 | 25 |
hepatobiliary system | 4.74e-10 | 25 |
foregut-midgut junction | 4.74e-10 | 25 |
septum transversum | 4.74e-10 | 25 |
sac | 1.13e-09 | 26 |
exocrine gland | 3.73e-08 | 31 |
exocrine system | 3.73e-08 | 31 |
endocrine gland | 3.01e-07 | 35 |
Ontology term | p-value | n |
---|---|---|
anemia | 1.93e-16 | 1 |
hematopoietic system disease | 6.94e-09 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.