FFCP PHASE1:Hg19::chr11:19838901..19838948,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C45|description=CAGE_peak_at_chr11:19838901..19838948,+|id=chr11:19838901..19838948,+|ontology_enrichment_celltype=CL:0002322!3.59e-52!5;CL:0000039!4.80e-25!7;CL:0000586!4.80e-25!7;CL:0000540!1.80e-16!6;CL:0000031!1.80e-16!6;CL:0000404!1.80e-16!6;CL:0000047!1.67e-12!8;CL:0000133!4.46e-10!59;CL:0000148!4.52e-10!10;CL:0000541!4.52e-10!10;CL:0000221!2.88e-08!71;CL:0000147!2.46e-07!14|ontology_enrichment_celltype_v019=CL:0000039;3.52e-90;7!CL:0000586;3.52e-90;7|ontology_enrichment_celltype_v019_2=CL:0000039,3.52e-90,7;CL:0000586,3.52e-90,7|ontology_enrichment_development_v019=UBERON:0009117;1.84e-63;10!UBERON:0005564;1.84e-63;10|ontology_enrichment_disease=DOID:3095!5.00e-17!22;DOID:2994!5.00e-17!22;DOID:3112!1.19e-11!1|ontology_enrichment_disease_v019=DOID:3095;2.19e-29;22!DOID:2994;2.19e-29;22|ontology_enrichment_disease_v019_2=DOID:3095,2.19e-29,22;DOID:2994,2.19e-29,22|ontology_enrichment_uberon=UBERON:0000473!5.89e-22!8;UBERON:0003135!4.78e-16!11;UBERON:0000991!1.06e-12!21;UBERON:0009196!1.06e-12!21;UBERON:0009117!1.06e-12!21;UBERON:0005564!1.06e-12!21;UBERON:0004176!4.06e-12!22;UBERON:0003101!4.05e-08!22;UBERON:0000079!4.05e-08!22;UBERON:0003133!1.42e-07!48|ontology_enrichment_uberon_v019=UBERON:0000473;4.74e-79;8!UBERON:0003135;8.62e-58;11!UBERON:0000991;9.67e-31;21!UBERON:0003101;2.19e-29;22!UBERON:0000079;2.19e-29;22!UBERON:0002323;9.17e-14;45!UBERON:0003133;2.55e-11;44!UBERON:0000922;6.11e-11;49!UBERON:0002553;5.32e-09;52!UBERON:0004458;7.82e-08;48!UBERON:0005156;1.99e-07;59!UBERON:0000990;1.99e-07;59|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.74e-79,8;UBERON:0003135,8.62e-58,11;UBERON:0000991,9.67e-31,21;UBERON:0009196,9.67e-31,21;UBERON:0009117,9.67e-31,21;UBERON:0005564,9.67e-31,21;UBERON:0004176,2.19e-29,22;UBERON:0003101,2.19e-29,22;UBERON:0000079,2.19e-29,22;UBERON:0002323,1.76e-14,46;UBERON:0003133,6.59e-14,48;UBERON:0004458,1.22e-13,49;UBERON:0003886,1.93e-12,54;UBERON:0005156,1.91e-11,59;UBERON:0000990,1.91e-11,59;UBERON:0002553,4.30e-11,61|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0.530119073285941,0.69716365721711,0.207322110030741,0.756962552626885,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.964518890790115,0.550157746388935,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,3.77358670045332,4.27547848424897,9.0057001544148,7.0198111001865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr11:19838901..19838948,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C45 | |||
|description=CAGE_peak_at_chr11:19838901..19838948,+ | |||
|id=chr11:19838901..19838948,+ | |||
|ontology_enrichment_celltype=CL:0002322!3.59e-52!5;CL:0000039!4.80e-25!7;CL:0000586!4.80e-25!7;CL:0000540!1.80e-16!6;CL:0000031!1.80e-16!6;CL:0000404!1.80e-16!6;CL:0000047!1.67e-12!8;CL:0000133!4.46e-10!59;CL:0000148!4.52e-10!10;CL:0000541!4.52e-10!10;CL:0000221!2.88e-08!71;CL:0000147!2.46e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000039;3.52e-90;7!CL:0000586;3.52e-90;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,3.52e-90,7;CL:0000586,3.52e-90,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.84e-63;10!UBERON:0005564;1.84e-63;10 | |||
|ontology_enrichment_disease=DOID:3095!5.00e-17!22;DOID:2994!5.00e-17!22;DOID:3112!1.19e-11!1 | |||
|ontology_enrichment_disease_v019=DOID:3095;2.19e-29;22!DOID:2994;2.19e-29;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.19e-29,22;DOID:2994,2.19e-29,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!5.89e-22!8;UBERON:0003135!4.78e-16!11;UBERON:0000991!1.06e-12!21;UBERON:0009196!1.06e-12!21;UBERON:0009117!1.06e-12!21;UBERON:0005564!1.06e-12!21;UBERON:0004176!4.06e-12!22;UBERON:0003101!4.05e-08!22;UBERON:0000079!4.05e-08!22;UBERON:0003133!1.42e-07!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;4.74e-79;8!UBERON:0003135;8.62e-58;11!UBERON:0000991;9.67e-31;21!UBERON:0003101;2.19e-29;22!UBERON:0000079;2.19e-29;22!UBERON:0002323;9.17e-14;45!UBERON:0003133;2.55e-11;44!UBERON:0000922;6.11e-11;49!UBERON:0002553;5.32e-09;52!UBERON:0004458;7.82e-08;48!UBERON:0005156;1.99e-07;59!UBERON:0000990;1.99e-07;59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.74e-79,8;UBERON:0003135,8.62e-58,11;UBERON:0000991,9.67e-31,21;UBERON:0009196,9.67e-31,21;UBERON:0009117,9.67e-31,21;UBERON:0005564,9.67e-31,21;UBERON:0004176,2.19e-29,22;UBERON:0003101,2.19e-29,22;UBERON:0000079,2.19e-29,22;UBERON:0002323,1.76e-14,46;UBERON:0003133,6.59e-14,48;UBERON:0004458,1.22e-13,49;UBERON:0003886,1.93e-12,54;UBERON:0005156,1.91e-11,59;UBERON:0000990,1.91e-11,59;UBERON:0002553,4.30e-11,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0.530119073285941,0.69716365721711,0.207322110030741,0.756962552626885,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.964518890790115,0.550157746388935,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,3.77358670045332,4.27547848424897,9.0057001544148,7.0198111001865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:19838901..19838948,+ | |||
}} |
Revision as of 17:07, 10 September 2013
Short description: | p@chr11:19838901..19838948, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:19838901..19838948, + |
Coexpression cluster: | C45_testicular_choriocarcinoma_H9_teratocarcinoma_Wilms_pancreatic_iPS |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 3.52e-90 | 7 |
germ cell | 3.52e-90 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 4.74e-79 | 8 |
male reproductive organ | 8.62e-58 | 11 |
gonad | 9.67e-31 | 21 |
indifferent external genitalia | 9.67e-31 | 21 |
indifferent gonad | 9.67e-31 | 21 |
gonad primordium | 9.67e-31 | 21 |
external genitalia | 2.19e-29 | 22 |
male organism | 2.19e-29 | 22 |
male reproductive system | 2.19e-29 | 22 |
body cavity | 1.76e-14 | 46 |
reproductive organ | 6.59e-14 | 48 |
body cavity or lining | 1.22e-13 | 49 |
body cavity precursor | 1.93e-12 | 54 |
reproductive structure | 1.91e-11 | 59 |
reproductive system | 1.91e-11 | 59 |
anatomical cavity | 4.30e-11 | 61 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.19e-29 | 22 |
germ cell cancer | 2.19e-29 | 22 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.