FFCP PHASE1:Hg19::chr11:18418371..18418411,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3939|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6535|TSSclassifier=S|UniProt=F5GWW2|association_with_transcript=6bp_to_ENST00000486690_5end|coexpression_cluster_id=C1625|description=CAGE_peak_4_at_LDHA_5end|id=chr11:18418371..18418411,+|ontology_enrichment_celltype=CL:0000055!1.10e-08!180|ontology_enrichment_celltype_v019=CL:0000136;3.59e-07;13|ontology_enrichment_celltype_v019_2=CL:0000136,2.50e-07,15|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000486!6.57e-08!82;UBERON:0004290!7.39e-08!70;UBERON:0000914!1.24e-07!83;UBERON:0002329!1.24e-07!83;UBERON:0003077!1.24e-07!83;UBERON:0003059!1.24e-07!83;UBERON:0007282!1.24e-07!83;UBERON:0009618!1.24e-07!83;UBERON:0007285!1.24e-07!83|ontology_enrichment_uberon_v019=UBERON:0001737;6.29e-10;9!UBERON:0001557;6.29e-10;9|ontology_enrichment_uberon_v019_2=UBERON:0001737,6.17e-10,9|phase1_expression=6.90377841228115,4.92431204949261,4.79244973926302,3.00219895059391,2.23480547213644,4.36169262050184,0,2.52687949370732,0.783556884599516,0.491467873003018,0,0.436882744260345,0,0.37129905888014,0.662794751455832,2.01697543935533,0.602694528023977,0.730310090387373,0,0,0.204000691244253,0,0.286235987131057,0.273748850145768,0.753255837568817,0.840547463227464,0.903106483949403,0.865818594450472,0,0.383829398097213,0.154816123316076,0.919421224478927,0.90361775633475,1.84877005083394,0.0774672005803016,0.568676929949686,0.587200878669695,0,0.401088894940283,0,0,0,0,0.581592955118259,0,0.970336244751265,0.232429036905685,0.411167888021826,0,0.863077176966451,0,0.47296445977717,0.344745680736619,0,0,0.188242339542605,0.272906150057846,0,0.918251677112708,0,0.639337125799041,0,0,0.426224750532694,0,0.56738522469114,0,0,1.5644487552606,0.434377689410233,0,0,0,0.211255286311942,0.425208599930087,0.628975936525128,0.22465726229299,0.300353785683013,0.16072558669708,0.285012743741249,0.39783335439818,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68152568894461,0,0.393419540227666,0.786021525498329,0.616804496998528,0.501559486172034,0,0,0,0.557052284425868,0.294605907474837,0,0,0.512365278902701,0.520237390239513,0.822189523018381,0,0,0,0,0,0.793165398882963,0,0.34362744548263,0.253019692019503,0.318565414324097,0.651083453856419,0.950452044448374,0.150575119077773,0,0,0.236777252044017,0,0,0.267440195783507,0.289648807765598,2.43806866313962,0.670700859703636,0.511450247374121,0.361439152384566,3.00802746381534,1.73815822752988,0,2.91980922181582,0.189069634328136,1.10864698731282,0.527008714158756,0.130979075497713,0,0.741568885568859,0,0.348259474598534,0.132957960518865,0,0.571994910780128,0,0.79504962946682,0.860234595106124,0,0,0.419499436209906,0.275118041940067,0.835979866147242,0,0,0.33472061276467,0,0,0,0.367663080345869,0,0.267899184852239,0,0.337834441449967,0,0,0.732806975721629,0,3.87780264148325,0.872188104285069,7.9515512271251,0.886413581652058,0.397227542439656,0.286836620748814,0.354668382198357,2.24271040056923,2.1349799145941,0.74000264525148,0.311211035399766,0.134710672069688,0.163461903113459,0.454072282934794,1.15235184896,0,1.5608003841516,0.570471821544449,0.448346041655403,0.704606991862589,0.485618833104395,0.842704840213491,0.408308342509787,0.122834317311768,0.723280468230358,0,0.494533858557114,0.910161361938026,0,0.336672227908132,0.500474079487857,0.554128230968366,0.877955241761676,1.83892677479412,0.600952235626387,1.02088964844019,1.61450672119976,1.06778694409284,0.847727604638247,0.900273288253207,0.309157587715317,1.8034837803194,0.930584281657949,0.675105328965065,1.07180705677318,0.504867548488229,0.552299391853796,0.969876340912871,1.42003837006646,0.604512589365842,0.339121184620975,1.73934767846967,1.90922284413584,2.29443676311203,0.487894824518382,0.132529768321485,0.464775771478074,0.518305275076852,1.00928340350251,0.72995471815166,1.56449532329816,1.28648187638577,4.14404764057442,0.928735856063958,0.721879481669586,2.72105640091641,4.21461725195254,1.44606617930089,3.52940712743661,2.61455332910887,3.08451804844426,2.02246962240247,3.13954344200554,3.8474715694639,0,0,0,0,3.80265104465493,7.86261773342101,2.36315962672562,1.32438929824395,0.491953754172454,1.20097467208968,1.64625428112938,0,1.70899253099772,0.185176890317059,0,1.03993478527958,1.44331342025273,0.231860809950154,0.352226082707465,0.144366447761074,0,0.380508304469197,0,0,0.246217006087397,0.234004265139238,0.743155811443641,0,0.16798212819886,0.992425680696705,0.447792613514241,0.871901815541886,3.06706143332169,0,0.792435906119034,0.621984346622316,0.144119953416961,0.88369703398466,0.571481048629521,1.14596527667483,0,6.84289784090821,1.13110241973656,0.600686115687835,0,0.224262168690721,0.43596006883328,0.36669142910475,0.129271715757778,0,0,0.26593811658487,0,0,1.41849132023278,0.799266537048298,1.14382394926518,0,1.64648067356154,0,0.710783897485092,1.58390374586686,0.30143937705958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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3939 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6535 | |||
|TSSclassifier=S | |||
|UniProt=F5GWW2 | |||
|association_with_transcript=6bp_to_ENST00000486690_5end | |||
|coexpression_cluster_id=C1625 | |||
|description=CAGE_peak_4_at_LDHA_5end | |||
|id=chr11:18418371..18418411,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.10e-08!180 | |||
|ontology_enrichment_celltype_v019=CL:0000136;3.59e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,2.50e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000486!6.57e-08!82;UBERON:0004290!7.39e-08!70;UBERON:0000914!1.24e-07!83;UBERON:0002329!1.24e-07!83;UBERON:0003077!1.24e-07!83;UBERON:0003059!1.24e-07!83;UBERON:0007282!1.24e-07!83;UBERON:0009618!1.24e-07!83;UBERON:0007285!1.24e-07!83 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;6.29e-10;9!UBERON:0001557;6.29e-10;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,6.17e-10,9 | |||
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| |||
|short_description=p4@LDHA | |||
}} |
Revision as of 17:00, 10 September 2013
Short description: | p4@LDHA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_LDHA_5end |
Coexpression cluster: | C1625_Olfactory_basal_Ewing_Adipocyte_mesenchymal_Smooth_serous |
Association with transcript: | 6bp_to_ENST00000486690_5end |
EntrezGene: | LDHA |
HGNC: | 6535 |
UniProt: | F5GWW2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 2.50e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
larynx | 6.17e-10 | 9 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.