FFCP PHASE1:Hg19::chr11:18332411..18332432,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_AB463066,CU689680_5end|coexpression_cluster_id=C5|description=CAGE_peak_1_at_AB463066_5end,CAGE_peak_1_at_CU689680_5end|id=chr11:18332411..18332432,-|ontology_enrichment_celltype=CL:0002057!2.38e-15!42;CL:0000860!6.98e-14!45;CL:0002009!1.26e-12!65;CL:0002194!5.01e-12!63;CL:0000576!5.01e-12!63;CL:0000040!5.01e-12!63;CL:0000559!5.01e-12!63;CL:0000557!6.26e-12!71;CL:0000766!9.98e-12!76;CL:0000839!4.42e-11!70;CL:0000763!7.85e-09!112;CL:0000049!7.85e-09!112|ontology_enrichment_celltype_v019=CL:0000182;1.28e-09;12!CL:0000840;6.91e-09;5|ontology_enrichment_celltype_v019_2=CL:0000182,1.27e-09,12;CL:0002194,6.32e-09,59;CL:0000576,6.32e-09,59;CL:0000040,6.32e-09,59;CL:0000559,6.32e-09,59;CL:0000840,7.05e-09,5;CL:0001029,7.05e-09,5;CL:0002009,1.29e-08,61;CL:0000839,6.31e-08,66;CL:0000557,8.44e-08,67;CL:0000766,3.20e-07,72;CL:0000860,7.79e-07,42;CL:0002057,7.79e-07,42|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!1.32e-10!115;UBERON:0002371!9.76e-10!80;UBERON:0002390!2.90e-09!102;UBERON:0003061!2.90e-09!102;UBERON:0001474!1.50e-08!86;UBERON:0002193!2.47e-08!112;UBERON:0004765!2.94e-08!101;UBERON:0001434!2.94e-08!101|ontology_enrichment_uberon_v019=UBERON:0000996;6.82e-13;1!UBERON:0002107;2.06e-10;19!UBERON:0006925;2.06e-10;19!UBERON:0002423;5.88e-08;25!UBERON:0003127;4.42e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0000996,7.68e-13,1;UBERON:0002107,2.04e-10,19;UBERON:0006925,2.04e-10,19;UBERON:0008836,2.04e-10,19;UBERON:0008835,5.05e-09,22;UBERON:0003894,5.05e-09,22;UBERON:0009854,1.22e-08,23;UBERON:0007499,5.83e-08,25;UBERON:0009497,5.83e-08,25;UBERON:0000015,5.83e-08,25;UBERON:0002423,5.83e-08,25;UBERON:0006235,5.83e-08,25;UBERON:0004161,5.83e-08,25;UBERON:0009856,1.16e-07,26;UBERON:0003127,3.70e-07,2;UBERON:0002371,8.22e-07,76;UBERON:0000473,9.94e-07,8|phase1_expression=0.363356758541113,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0.767658796194425,0,0,0,0,0,0,0,1.10799081706375,0.200544447470142,0.217010870715852,0,0,0,0.145398238779565,0.755751887377619,0.727752183563449,0,0,0.929119112685311,0,1.5369642391746,0.236482229888585,1.03423704220986,1.93645405075148,4.06279459783025,0.941211697713023,0,0.674170453335254,0,0.962787081228281,0.639337125799041,0,0.199463657621632,0,0,0.56738522469114,0,0,0.521482918420201,0.868755378820466,0,0,0.316462387440884,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0.270803863765016,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982343066232845,0,0,3.24547393654683,6.09454080547435,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.9430538304014,21.6221987669078,6.49868897349544,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0.148631162288728,0,0.335964256397719,0.141775097242386,0.358234090811393,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0.234282829985426,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0.303127571446259,0,0,0,0,0,0,1.02341449813341,0,0,0,0,0,0,0,0,0.40101294060657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661139661443912,0,0.638063562472921,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43050537267123,0,0.443430153536676,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0.47748896947538,0,0,0.994147647766298,0,0,0,0,0,0,0,0,0,0.311039587661807,0,0.537063524026827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0.533034776018635,0,0.31396051279005,0,0,0,0,0,0,0,0,0,0,0,0.530745387020035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.674921674654501,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,61.1122814437604,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0.159296767163702,0,0,0,0.265841714557995,0,0,0,0,0.181848659202559,0.107410557042488,0,0,0,0.343395705182793,0,0,0,0,0.260994291965212,0.226705925512272,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0.389720617678777,0.13286484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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_AB463066,CU689680_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_AB463066_5end,CAGE_peak_1_at_CU689680_5end | |||
|id=chr11:18332411..18332432,- | |||
|ontology_enrichment_celltype=CL:0002057!2.38e-15!42;CL:0000860!6.98e-14!45;CL:0002009!1.26e-12!65;CL:0002194!5.01e-12!63;CL:0000576!5.01e-12!63;CL:0000040!5.01e-12!63;CL:0000559!5.01e-12!63;CL:0000557!6.26e-12!71;CL:0000766!9.98e-12!76;CL:0000839!4.42e-11!70;CL:0000763!7.85e-09!112;CL:0000049!7.85e-09!112 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.28e-09;12!CL:0000840;6.91e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.27e-09,12;CL:0002194,6.32e-09,59;CL:0000576,6.32e-09,59;CL:0000040,6.32e-09,59;CL:0000559,6.32e-09,59;CL:0000840,7.05e-09,5;CL:0001029,7.05e-09,5;CL:0002009,1.29e-08,61;CL:0000839,6.31e-08,66;CL:0000557,8.44e-08,67;CL:0000766,3.20e-07,72;CL:0000860,7.79e-07,42;CL:0002057,7.79e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!1.32e-10!115;UBERON:0002371!9.76e-10!80;UBERON:0002390!2.90e-09!102;UBERON:0003061!2.90e-09!102;UBERON:0001474!1.50e-08!86;UBERON:0002193!2.47e-08!112;UBERON:0004765!2.94e-08!101;UBERON:0001434!2.94e-08!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0000996;6.82e-13;1!UBERON:0002107;2.06e-10;19!UBERON:0006925;2.06e-10;19!UBERON:0002423;5.88e-08;25!UBERON:0003127;4.42e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000996,7.68e-13,1;UBERON:0002107,2.04e-10,19;UBERON:0006925,2.04e-10,19;UBERON:0008836,2.04e-10,19;UBERON:0008835,5.05e-09,22;UBERON:0003894,5.05e-09,22;UBERON:0009854,1.22e-08,23;UBERON:0007499,5.83e-08,25;UBERON:0009497,5.83e-08,25;UBERON:0000015,5.83e-08,25;UBERON:0002423,5.83e-08,25;UBERON:0006235,5.83e-08,25;UBERON:0004161,5.83e-08,25;UBERON:0009856,1.16e-07,26;UBERON:0003127,3.70e-07,2;UBERON:0002371,8.22e-07,76;UBERON:0000473,9.94e-07,8 | |||
|phase1_expression=0.363356758541113,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0.767658796194425,0,0,0,0,0,0,0,1.10799081706375,0.200544447470142,0.217010870715852,0,0,0,0.145398238779565,0.755751887377619,0.727752183563449,0,0,0.929119112685311,0,1.5369642391746,0.236482229888585,1.03423704220986,1.93645405075148,4.06279459783025,0.941211697713023,0,0.674170453335254,0,0.962787081228281,0.639337125799041,0,0.199463657621632,0,0,0.56738522469114,0,0,0.521482918420201,0.868755378820466,0,0,0.316462387440884,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0.270803863765016,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982343066232845,0,0,3.24547393654683,6.09454080547435,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.9430538304014,21.6221987669078,6.49868897349544,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0.148631162288728,0,0.335964256397719,0.141775097242386,0.358234090811393,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0.234282829985426,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0.303127571446259,0,0,0,0,0,0,1.02341449813341,0,0,0,0,0,0,0,0,0.40101294060657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661139661443912,0,0.638063562472921,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43050537267123,0,0.443430153536676,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0.47748896947538,0,0,0.994147647766298,0,0,0,0,0,0,0,0,0,0.311039587661807,0,0.537063524026827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0.533034776018635,0,0.31396051279005,0,0,0,0,0,0,0,0,0,0,0,0.530745387020035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.674921674654501,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,61.1122814437604,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0.159296767163702,0,0,0,0.265841714557995,0,0,0,0,0.181848659202559,0.107410557042488,0,0,0,0.343395705182793,0,0,0,0,0.260994291965212,0.226705925512272,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0.389720617678777,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0.383287282918786,0,0,0.606965604236632,0.227662191351298,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0.3414369541879,0,0,0,0,0,0,0,0,0.111855431797792,0,0.731507549893617,0,0,0,0,0,0,0,0,0,0,2.54674721756217,0.218559560503957,0,0,0,0.196308467114945,0,0.4226557275834,0,0,0.0644578879735772,0.0999411559249289,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66713136080127,1.60778478093707,0,0,0.213233981900981,0,0.258355639344024,0.0620747142958579,0,0,0.202117188958219,0,0,0.134704106029175,1.86477734020959,0.332660356546013,0.0814032686109745,0,0,0,0,0,0,1.33151354837103,0.201273793591026,0 | |||
|short_description=p1@AB463066,p1@CU689680 | |||
}} |
Revision as of 17:00, 10 September 2013
Short description: | p1@AB463066, p1@CU689680 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_AB463066_5end, CAGE_peak_1_at_CU689680_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_AB463066, CU689680_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.27e-09 | 12 |
monopoietic cell | 6.32e-09 | 59 |
monocyte | 6.32e-09 | 59 |
monoblast | 6.32e-09 | 59 |
promonocyte | 6.32e-09 | 59 |
immature conventional dendritic cell | 7.05e-09 | 5 |
common dendritic progenitor | 7.05e-09 | 5 |
macrophage dendritic cell progenitor | 1.29e-08 | 61 |
myeloid lineage restricted progenitor cell | 6.31e-08 | 66 |
granulocyte monocyte progenitor cell | 8.44e-08 | 67 |
myeloid leukocyte | 3.20e-07 | 72 |
classical monocyte | 7.79e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.79e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
vagina | 7.68e-13 | 1 |
liver | 2.04e-10 | 19 |
digestive gland | 2.04e-10 | 19 |
liver bud | 2.04e-10 | 19 |
hepatic diverticulum | 5.05e-09 | 22 |
liver primordium | 5.05e-09 | 22 |
digestive tract diverticulum | 1.22e-08 | 23 |
epithelial sac | 5.83e-08 | 25 |
epithelium of foregut-midgut junction | 5.83e-08 | 25 |
anatomical boundary | 5.83e-08 | 25 |
hepatobiliary system | 5.83e-08 | 25 |
foregut-midgut junction | 5.83e-08 | 25 |
septum transversum | 5.83e-08 | 25 |
sac | 1.16e-07 | 26 |
open tracheal system trachea | 3.70e-07 | 2 |
bone marrow | 8.22e-07 | 76 |
testis | 9.94e-07 | 8 |
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