FFCP PHASE1:Hg19::chr11:17099783..17099787,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=NA|TSSclassifier=S|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:17099783..17099787,+|id=chr11:17099783..17099787,+|ontology_enrichment_celltype=CL:0000542!9.65e-23!53;CL:0000051!9.65e-23!53;CL:0000037!1.95e-22!172;CL:0000566!1.95e-22!172;CL:0000838!3.37e-22!52;CL:0000988!1.74e-20!182;CL:0002032!1.99e-19!165;CL:0000837!1.99e-19!165;CL:0000738!2.23e-17!140;CL:0000945!2.67e-15!24;CL:0000826!2.67e-15!24;CL:0002031!8.12e-14!124;CL:0002087!9.28e-14!119;CL:0000236!9.77e-12!14;CL:0000084!5.20e-07!25;CL:0000827!5.20e-07!25;CL:0002393!5.58e-07!9;CL:0002397!5.58e-07!9|ontology_enrichment_celltype_v019=CL:0000542;1.54e-23;53!CL:0000945;2.08e-21;24!CL:0000236;2.59e-15;13!CL:0000084;6.44e-12;25!CL:0002393;1.04e-10;6!CL:0002397;1.04e-10;6!CL:0000784;1.71e-09;3!CL:0000623;3.32e-08;3!CL:0000738;6.27e-08;136!CL:0000898;1.37e-07;3!CL:0002087;1.48e-07;104|ontology_enrichment_celltype_v019_2=CL:0000838,5.86e-37,52;CL:0000542,4.29e-36,53;CL:0000051,4.29e-36,53;CL:0000037,1.24e-32,168;CL:0000988,1.31e-31,177;CL:0000738,7.26e-31,136;CL:0002032,7.74e-27,161;CL:0000837,7.74e-27,161;CL:0002031,3.79e-26,120;CL:0002087,3.52e-23,115;CL:0000945,2.25e-21,24;CL:0000826,2.25e-21,24;CL:0000236,1.44e-17,14;CL:0000084,4.84e-12,25;CL:0000827,4.84e-12,25;CL:0000784,1.70e-09,3;CL:0000219,4.12e-09,386;CL:0000817,7.56e-09,3;CL:0000134,7.56e-09,354;CL:0002320,2.01e-08,361;CL:0000623,2.87e-08,3;CL:0000825,2.87e-08,3;CL:0000898,7.53e-08,3;CL:0002393,7.16e-07,9;CL:0002397,7.16e-07,9|ontology_enrichment_development_v019=CL:0000051;1.54e-23;53|ontology_enrichment_disease=DOID:2531!7.14e-13!51;DOID:0060083!7.14e-13!51;DOID:0050686!1.96e-10!137;DOID:0060058!8.60e-08!10;DOID:1240!1.39e-07!39;DOID:162!2.03e-07!235;DOID:14566!5.89e-07!239|ontology_enrichment_disease_v019=DOID:0060058;7.18e-12;10!DOID:2531;5.60e-08;51!DOID:0060083;5.60e-08;51|ontology_enrichment_disease_v019_2=DOID:2531,2.22e-13,51;DOID:0060083,2.22e-13,51;DOID:0060058,1.03e-11,10|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.98e-08,371|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0.263766978228454,0.123766352960047,0,0,0,0,0,0.123121058076788,0.408001382488506,0,0,0,0,0.0764134057479513,0.492603536699674,0.314843125254717,1.96682138424452,0.767658796194425,2.94150634300544,2.75826367343678,0,0,1.08454080812422,4.54941543959749,5.87200878669694,7.20194031091441,2.4065333696417,4.55722828503289,0,0,0,0,0,0,0,0,0,0,0,0,0.689491361473237,0,1.35426486594342,0.188242339542605,0,0,0,0.320929027076094,1.27867425159808,0,0,0.426224750532694,0,0.56738522469114,0.622822248995575,0.251248665256743,0,0,0,0.368277635987565,0,1.05627643155971,1.27562579979026,0.628975936525128,0.44931452458598,0,0.16072558669708,0.570025487482497,0.39783335439818,0.547992461293902,7.03984977845291,1.09227722252426,0.889509253863555,0.426730222566507,0.800791974072025,2.87376219977242,3.96626923670917,0.954053754535364,5.12291672198504,4.69789751496751,6.11637165000366,3.96513985737078,4.48406850385229,0.526768169550154,0,0.786021525498329,0,0.334372990781356,1.30368906653436,1.4203434172042,0,0.891283655081389,1.47302953737419,0.664601683750863,0,0.768547918354051,0.650296737799391,0,0.552700035571697,0.289803085735052,1.18629250529648,1.60524496853828,0,0,1.91610246800961,1.03088233644789,0.759059076058509,0,0,0,0.301150238155546,0.255973222308837,0,0,0.821127996921047,0.80642697289893,2.94184215361858,1.59306844271079,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,0.130979075497713,0,0,0,0,0,6.67773748054957,14.2998727695032,8.17206502925043,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0.25326102332916,0,0.573673241497627,0,0,0,0,0,0.134710672069688,0,0,0,0.234321431833797,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0.257640540045629,0.18611685633159,0,0.0974370051611986,0.252433774244115,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.09024169590255,0,0.171567810298526,0.109750285408626,0,0,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0.290633938513962,0,0,0,1.03664057770386,2.01767934783746,0.6312121671319,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,1.41849132023278,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0,0,0,2.12961773587702,2.1673383622212,1.50939302401662,2.43851768931522,0,0,0,0.167516265334349,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2942852049117,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0.532685175939381,0.0821271560138091,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0.308097234229289,0,0.275673144969061,0,0,0.0852266274161009,0,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0.869932992075073,0,0.143124886741991,0,0.31637942471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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=S | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:17099783..17099787,+ | |||
|id=chr11:17099783..17099787,+ | |||
|ontology_enrichment_celltype=CL:0000542!9.65e-23!53;CL:0000051!9.65e-23!53;CL:0000037!1.95e-22!172;CL:0000566!1.95e-22!172;CL:0000838!3.37e-22!52;CL:0000988!1.74e-20!182;CL:0002032!1.99e-19!165;CL:0000837!1.99e-19!165;CL:0000738!2.23e-17!140;CL:0000945!2.67e-15!24;CL:0000826!2.67e-15!24;CL:0002031!8.12e-14!124;CL:0002087!9.28e-14!119;CL:0000236!9.77e-12!14;CL:0000084!5.20e-07!25;CL:0000827!5.20e-07!25;CL:0002393!5.58e-07!9;CL:0002397!5.58e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.54e-23;53!CL:0000945;2.08e-21;24!CL:0000236;2.59e-15;13!CL:0000084;6.44e-12;25!CL:0002393;1.04e-10;6!CL:0002397;1.04e-10;6!CL:0000784;1.71e-09;3!CL:0000623;3.32e-08;3!CL:0000738;6.27e-08;136!CL:0000898;1.37e-07;3!CL:0002087;1.48e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,5.86e-37,52;CL:0000542,4.29e-36,53;CL:0000051,4.29e-36,53;CL:0000037,1.24e-32,168;CL:0000988,1.31e-31,177;CL:0000738,7.26e-31,136;CL:0002032,7.74e-27,161;CL:0000837,7.74e-27,161;CL:0002031,3.79e-26,120;CL:0002087,3.52e-23,115;CL:0000945,2.25e-21,24;CL:0000826,2.25e-21,24;CL:0000236,1.44e-17,14;CL:0000084,4.84e-12,25;CL:0000827,4.84e-12,25;CL:0000784,1.70e-09,3;CL:0000219,4.12e-09,386;CL:0000817,7.56e-09,3;CL:0000134,7.56e-09,354;CL:0002320,2.01e-08,361;CL:0000623,2.87e-08,3;CL:0000825,2.87e-08,3;CL:0000898,7.53e-08,3;CL:0002393,7.16e-07,9;CL:0002397,7.16e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000051;1.54e-23;53 | |||
|ontology_enrichment_disease=DOID:2531!7.14e-13!51;DOID:0060083!7.14e-13!51;DOID:0050686!1.96e-10!137;DOID:0060058!8.60e-08!10;DOID:1240!1.39e-07!39;DOID:162!2.03e-07!235;DOID:14566!5.89e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:0060058;7.18e-12;10!DOID:2531;5.60e-08;51!DOID:0060083;5.60e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.22e-13,51;DOID:0060083,2.22e-13,51;DOID:0060058,1.03e-11,10 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.98e-08,371 | |||
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| |||
|short_description=p@chr11:17099783..17099787,+ | |||
}} |
Revision as of 16:54, 10 September 2013
Short description: | p@chr11:17099783..17099787, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:17099783..17099787, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 5.86e-37 | 52 |
lymphocyte | 4.29e-36 | 53 |
common lymphoid progenitor | 4.29e-36 | 53 |
hematopoietic stem cell | 1.24e-32 | 168 |
hematopoietic cell | 1.31e-31 | 177 |
leukocyte | 7.26e-31 | 136 |
hematopoietic oligopotent progenitor cell | 7.74e-27 | 161 |
hematopoietic multipotent progenitor cell | 7.74e-27 | 161 |
hematopoietic lineage restricted progenitor cell | 3.79e-26 | 120 |
nongranular leukocyte | 3.52e-23 | 115 |
lymphocyte of B lineage | 2.25e-21 | 24 |
pro-B cell | 2.25e-21 | 24 |
B cell | 1.44e-17 | 14 |
T cell | 4.84e-12 | 25 |
pro-T cell | 4.84e-12 | 25 |
plasmacytoid dendritic cell | 1.70e-09 | 3 |
motile cell | 4.12e-09 | 386 |
precursor B cell | 7.56e-09 | 3 |
mesenchymal cell | 7.56e-09 | 354 |
connective tissue cell | 2.01e-08 | 361 |
natural killer cell | 2.87e-08 | 3 |
pro-NK cell | 2.87e-08 | 3 |
naive T cell | 7.53e-08 | 3 |
intermediate monocyte | 7.16e-07 | 9 |
CD14-positive, CD16-positive monocyte | 7.16e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.98e-08 | 371 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.22e-13 | 51 |
immune system cancer | 2.22e-13 | 51 |
lymphoma | 1.03e-11 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.