FFCP PHASE1:Hg19::chr11:5710892..5710903,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10346|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=16379|TSSclassifier=S|UniProt=Q8IYM9|association_with_transcript=-15bp_to_ENST00000379965,uc001mbr.2,uc009yes.2,uc009yet.1,uc010qzm.1_5end|description=CAGE_peak_4_at_TRIM22_5end|id=chr11:5710892..5710903,+|ontology_enrichment_celltype=CL:0000048!5.16e-14!430;CL:0000723!1.04e-13!436;CL:0000034!1.19e-13!444;CL:0002371!1.37e-13!591;CL:0000144!4.64e-13!625;CL:0002031!1.56e-11!124;CL:0002087!6.34e-11!119;CL:0000738!1.64e-10!140;CL:0000003!1.87e-10!722;CL:0000037!1.52e-09!172;CL:0000566!1.52e-09!172;CL:0002032!3.59e-09!165;CL:0000837!3.59e-09!165;CL:0000359!4.37e-09!32;CL:0000134!8.35e-09!358;CL:0000542!2.47e-08!53;CL:0000051!2.47e-08!53;CL:0000838!2.89e-08!52;CL:0002320!6.30e-08!365;CL:0000988!7.77e-08!182;CL:0000192!1.16e-07!42;CL:0000514!1.16e-07!42;CL:0000945!1.53e-07!24;CL:0000826!1.53e-07!24;CL:0000219!2.87e-07!390;CL:0002057!3.20e-07!42|ontology_enrichment_celltype_v019=CL:0000945;2.99e-08;24!CL:0000236;8.85e-08;13!CL:0000359;2.45e-07;32|ontology_enrichment_celltype_v019_2=CL:0000034,1.69e-11,441;CL:0000048,2.63e-11,427;CL:0000723,4.83e-11,433;CL:0002031,2.01e-08,120;CL:0000945,2.19e-08,24;CL:0000826,2.19e-08,24;CL:0000134,2.73e-08,354;CL:0002087,4.42e-08,115;CL:0000359,6.77e-08,32;CL:0002320,1.23e-07,361;CL:0000236,3.43e-07,14;CL:0000838,4.54e-07,52;CL:0000738,6.19e-07,136;CL:0000219,6.35e-07,386;CL:0000542,8.31e-07,53;CL:0000051,8.31e-07,53|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001637!7.46e-09!42;UBERON:0003509!7.46e-09!42;UBERON:0004572!7.46e-09!42;UBERON:0004573!3.25e-08!33;UBERON:0004571!3.25e-08!33;UBERON:0002193!1.85e-07!112;UBERON:0001981!3.44e-07!60;UBERON:0007500!3.44e-07!60;UBERON:0004537!3.44e-07!60;UBERON:0006965!3.44e-07!60;UBERON:0002204!4.21e-07!167;UBERON:0002390!4.84e-07!102;UBERON:0003061!4.84e-07!102;UBERON:0002384!6.05e-07!375;UBERON:0003081!6.10e-07!216|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.97e-07,371|phase1_expression=2.90685406832891,1.49870366723688,3.52386010239928,0,2.23480547213644,2.61701557230111,0,1.26343974685366,0,0,0.697801167972428,0,0.263766978228454,0,0,6.72325146451775,6.62963980826375,8.03341099426111,8.29485757943862,0,0,0,1.14494394852423,0.410623275218653,0.753255837568817,1.45185470921107,1.47781061009902,1.18066171970519,0.786728553697808,1.91914699048606,0.309632246632152,0.919421224478927,0,0.369754010166788,2.78881922089086,0.284338464974843,1.46800219667424,0,0.200544447470142,0,0,0,0.257575567634187,0.436194716338694,0.377875943688809,0.485168122375632,0,0,0,3.16461631554365,2.56160706529101,2.36482229888585,1.03423704220986,0.645484683583826,0,0.376484679085209,0.272906150057846,0.674170453335254,0.918251677112708,0.962787081228281,1.27867425159808,2.63881040149373,1.99463657621632,3.83602275479425,0.870627715885752,0.56738522469114,0.622822248995575,2.00998932205395,1.5644487552606,2.6062661364614,1.21079900526674,1.10483290796269,2.53169909952708,1.05627643155971,1.70083439972035,1.04829322754188,0.44931452458598,1.35159203557356,0.32145117339416,1.99508920618874,3.18266683518544,2.37463399894024,3.51992488922645,3.82297027883492,1.77901850772711,2.13365111283254,3.60356388332411,4.02326707968138,5.2883589822789,0,2.27685187643779,1.17447437874188,1.91136614062614,6.60856642895129,1.12101712596307,1.05353633910031,0.786839080455332,0.393010762749165,0.822405995998037,3.51091640320424,1.95553359980154,1.89379122293893,1.94826728407911,1.6711568532776,2.06224135232386,1.77227115666897,3.5204502289452,0.896639238079726,0.520237390239513,0.657751618414705,0.829050053357545,1.73881851441031,0.889719378972363,0.535081656179426,2.09071047609954,0.566546713487831,1.14966148080576,0.34362744548263,0.759059076058509,0.95569624297229,0.651083453856419,3.8018081777935,1.6563263098555,1.91979916731628,1.24930726552346,0.947109008176067,1.64225599384209,1.20964045934839,0.267440195783507,0.144824403882799,0,0,0.383587685530591,0,0,0.144846518960824,0,0.486634870302636,1.13441780596881,0.443458794925128,0.175669571386252,0.196468613246569,0.728590576585084,0,0.649094787309367,0,0.132957960518865,0.238490624305342,0.571994910780128,0,0.79504962946682,0.860234595106124,1.38856200643038,0,0,0.825354125820202,0.835979866147242,1.8089173141853,1.06729878806013,1.00416183829401,0,0,0.488124115096339,0.735326160691737,0.81014194788176,1.69669483739752,0.673588117878509,0.450445921933289,0,0,1.09921046358244,0,0,0,0,1.77282716330412,3.70745706277013,4.30254931123221,0.354668382198357,0,0,0.49333509683432,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0.597794722207204,0.117434498643765,0,0,1.42907919878425,0,0.619954687054593,1.18800285728205,0.741800787835671,0,0,0,0,1.10825646193673,1.31693286264251,0.612975591598039,0.45071417671979,0.794025282120147,2.51145489964407,1.494901721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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10346 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16379 | |||
|TSSclassifier=S | |||
|UniProt=Q8IYM9 | |||
|association_with_transcript=-15bp_to_ENST00000379965,uc001mbr.2,uc009yes.2,uc009yet.1,uc010qzm.1_5end | |||
|description=CAGE_peak_4_at_TRIM22_5end | |||
|id=chr11:5710892..5710903,+ | |||
|ontology_enrichment_celltype=CL:0000048!5.16e-14!430;CL:0000723!1.04e-13!436;CL:0000034!1.19e-13!444;CL:0002371!1.37e-13!591;CL:0000144!4.64e-13!625;CL:0002031!1.56e-11!124;CL:0002087!6.34e-11!119;CL:0000738!1.64e-10!140;CL:0000003!1.87e-10!722;CL:0000037!1.52e-09!172;CL:0000566!1.52e-09!172;CL:0002032!3.59e-09!165;CL:0000837!3.59e-09!165;CL:0000359!4.37e-09!32;CL:0000134!8.35e-09!358;CL:0000542!2.47e-08!53;CL:0000051!2.47e-08!53;CL:0000838!2.89e-08!52;CL:0002320!6.30e-08!365;CL:0000988!7.77e-08!182;CL:0000192!1.16e-07!42;CL:0000514!1.16e-07!42;CL:0000945!1.53e-07!24;CL:0000826!1.53e-07!24;CL:0000219!2.87e-07!390;CL:0002057!3.20e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000945;2.99e-08;24!CL:0000236;8.85e-08;13!CL:0000359;2.45e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,1.69e-11,441;CL:0000048,2.63e-11,427;CL:0000723,4.83e-11,433;CL:0002031,2.01e-08,120;CL:0000945,2.19e-08,24;CL:0000826,2.19e-08,24;CL:0000134,2.73e-08,354;CL:0002087,4.42e-08,115;CL:0000359,6.77e-08,32;CL:0002320,1.23e-07,361;CL:0000236,3.43e-07,14;CL:0000838,4.54e-07,52;CL:0000738,6.19e-07,136;CL:0000219,6.35e-07,386;CL:0000542,8.31e-07,53;CL:0000051,8.31e-07,53 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!7.46e-09!42;UBERON:0003509!7.46e-09!42;UBERON:0004572!7.46e-09!42;UBERON:0004573!3.25e-08!33;UBERON:0004571!3.25e-08!33;UBERON:0002193!1.85e-07!112;UBERON:0001981!3.44e-07!60;UBERON:0007500!3.44e-07!60;UBERON:0004537!3.44e-07!60;UBERON:0006965!3.44e-07!60;UBERON:0002204!4.21e-07!167;UBERON:0002390!4.84e-07!102;UBERON:0003061!4.84e-07!102;UBERON:0002384!6.05e-07!375;UBERON:0003081!6.10e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.97e-07,371 | |||
|phase1_expression=2.90685406832891,1.49870366723688,3.52386010239928,0,2.23480547213644,2.61701557230111,0,1.26343974685366,0,0,0.697801167972428,0,0.263766978228454,0,0,6.72325146451775,6.62963980826375,8.03341099426111,8.29485757943862,0,0,0,1.14494394852423,0.410623275218653,0.753255837568817,1.45185470921107,1.47781061009902,1.18066171970519,0.786728553697808,1.91914699048606,0.309632246632152,0.919421224478927,0,0.369754010166788,2.78881922089086,0.284338464974843,1.46800219667424,0,0.200544447470142,0,0,0,0.257575567634187,0.436194716338694,0.377875943688809,0.485168122375632,0,0,0,3.16461631554365,2.56160706529101,2.36482229888585,1.03423704220986,0.645484683583826,0,0.376484679085209,0.272906150057846,0.674170453335254,0.918251677112708,0.962787081228281,1.27867425159808,2.63881040149373,1.99463657621632,3.83602275479425,0.870627715885752,0.56738522469114,0.622822248995575,2.00998932205395,1.5644487552606,2.6062661364614,1.21079900526674,1.10483290796269,2.53169909952708,1.05627643155971,1.70083439972035,1.04829322754188,0.44931452458598,1.35159203557356,0.32145117339416,1.99508920618874,3.18266683518544,2.37463399894024,3.51992488922645,3.82297027883492,1.77901850772711,2.13365111283254,3.60356388332411,4.02326707968138,5.2883589822789,0,2.27685187643779,1.17447437874188,1.91136614062614,6.60856642895129,1.12101712596307,1.05353633910031,0.786839080455332,0.393010762749165,0.822405995998037,3.51091640320424,1.95553359980154,1.89379122293893,1.94826728407911,1.6711568532776,2.06224135232386,1.77227115666897,3.5204502289452,0.896639238079726,0.520237390239513,0.657751618414705,0.829050053357545,1.73881851441031,0.889719378972363,0.535081656179426,2.09071047609954,0.566546713487831,1.14966148080576,0.34362744548263,0.759059076058509,0.95569624297229,0.651083453856419,3.8018081777935,1.6563263098555,1.91979916731628,1.24930726552346,0.947109008176067,1.64225599384209,1.20964045934839,0.267440195783507,0.144824403882799,0,0,0.383587685530591,0,0,0.144846518960824,0,0.486634870302636,1.13441780596881,0.443458794925128,0.175669571386252,0.196468613246569,0.728590576585084,0,0.649094787309367,0,0.132957960518865,0.238490624305342,0.571994910780128,0,0.79504962946682,0.860234595106124,1.38856200643038,0,0,0.825354125820202,0.835979866147242,1.8089173141853,1.06729878806013,1.00416183829401,0,0,0.488124115096339,0.735326160691737,0.81014194788176,1.69669483739752,0.673588117878509,0.450445921933289,0,0,1.09921046358244,0,0,0,0,1.77282716330412,3.70745706277013,4.30254931123221,0.354668382198357,0,0,0.49333509683432,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0.597794722207204,0.117434498643765,0,0,1.42907919878425,0,0.619954687054593,1.18800285728205,0.741800787835671,0,0,0,0,1.10825646193673,1.31693286264251,0.612975591598039,0.45071417671979,0.794025282120147,2.51145489964407,1.49490172172997,0.423863802319124,3.00091096084402,3.19462840639161,3.86460810068444,3.16398655763703,1.85653965465393,1.46155507741798,1.51460264546469,2.20919756741518,1.13152239773168,2.13005755509969,1.41052937518696,1.69560592310488,1.54608682530637,1.63647672354501,1.14721838155602,0,0,0,0.10366105501537,0,0,0,0,0,2.3218396401599,2.16563844500876,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0.441463099414651,0.122988438543114,0.514703430895577,1.09750285408626,0,0.100528972411631,0.740707561268237,0,0,0,0.115930404975077,2.34817388471643,0.433099343283221,0,0.761016608938393,0,0,0.984868024349589,0.234004265139238,1.0404181360211,5.62403003920662,8.90305279453955,4.67857820899875,0.268675568108545,0,0,9.36060152002293,1.49682337822484,0.414656231081544,0.432359860250884,0.6312121671319,0.063497894292169,0.381988425558278,0,0,0.102827492703324,0.600686115687835,1.42913216315289,0,0,0,3.87815147273333,0,0,1.06375246633948,0,0.257207374262142,0,0,1.00084595560703,0,0.823240336780769,0.65147236858747,0.355391948742546,0,1.80863626235752,1.74306691720059,1.19967589418468,1.2162378064119,0,0,0,0,0,0.723906533337896,0.205476322550383,0.895304816199478,0.112085143993527,1.18218456121156,0,0.256686072559497,0,0,0,0.167516265334349,0,1.49801404789436,0,0,0.12269149171914,0,0,1.03985430765404,1.07057393278297,2.36553622550902,1.17141414992713,0.601892199455438,2.27407504055985,1.03473071292505,0,0,2.17209036170207,0.195801157462741,0,0.206768026122887,0.647142602455851,0.74709290462411,0,3.32870879020994,0,2.48107807818777,6.44540287809862,2.80660094433074,1.15325234330131,1.02341449813341,1.44768529029247,1.48418066444991,0.462629081407967,0.177561725313127,0.739144404124282,0.519254429183621,0.813472649219715,0,2.00506470303285,0.368323955743585,0.34444334449382,0.182091168006717,0.786746489756545,0,0.308061348417659,0,0,1.37217117560738,0,0,0,0,0,0,0.764628819135115,0,0.223874754722178,0,0.261435451024901,0,0.328014645699706,1.30151357865721,0.309123034943167,0,0,1.14853107599234,0,0,0.193341436584244,0,0.15350367472613,0.551346289938122,0.644521469209642,0.145016693914229,0.0852266274161009,0.712256285173899,0.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| |||
|short_description=p4@TRIM22 | |||
}} |
Revision as of 18:08, 10 September 2013
Short description: | p4@TRIM22 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_TRIM22_5end |
Coexpression cluster: | NA |
Association with transcript: | -15bp_to_ENST00000379965, uc001mbr.2, uc009yes.2, uc009yet.1, uc010qzm.1_5end |
EntrezGene: | TRIM22 |
HGNC: | 16379 |
UniProt: | Q8IYM9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 1.69e-11 | 441 |
multi fate stem cell | 2.63e-11 | 427 |
somatic stem cell | 4.83e-11 | 433 |
hematopoietic lineage restricted progenitor cell | 2.01e-08 | 120 |
lymphocyte of B lineage | 2.19e-08 | 24 |
pro-B cell | 2.19e-08 | 24 |
mesenchymal cell | 2.73e-08 | 354 |
nongranular leukocyte | 4.42e-08 | 115 |
vascular associated smooth muscle cell | 6.77e-08 | 32 |
connective tissue cell | 1.23e-07 | 361 |
B cell | 3.43e-07 | 14 |
lymphoid lineage restricted progenitor cell | 4.54e-07 | 52 |
leukocyte | 6.19e-07 | 136 |
motile cell | 6.35e-07 | 386 |
lymphocyte | 8.31e-07 | 53 |
common lymphoid progenitor | 8.31e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 3.97e-07 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.