FFCP PHASE1:Hg19::chr11:796197..796263,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=79751|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=19954|TSSclassifier=W|UniProt=E9PP01,E9PN26,Q9H936|association_with_transcript=0bp_to_ENST00000528606,ENST00000530360,ENST00000532361,ENST00000532459,NM_024698,uc001lri.2,uc009ycj.2_5end|description=CAGE_peak_2_at_SLC25A22_5end|id=chr11:796197..796263,-|ontology_enrichment_celltype=CL:0000192!5.93e-07!42;CL:0000514!5.93e-07!42|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=CL:0000192,8.06e-07,43;CL:0000514,8.06e-07,43|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000475!1.63e-10!365;UBERON:0003102!6.05e-10!95;UBERON:0002199!7.70e-08!45;UBERON:0002416!7.70e-08!45;UBERON:0005256!6.77e-07!143|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0003102,5.30e-10,99;UBERON:0002199,4.69e-08,46;UBERON:0002416,4.69e-08,46|phase1_expression=1.45342703416445,6.42301571672949,3.10099689011137,3.00219895059391,5.81049422755474,2.61701557230111,10.1319951267324,13.8978372153903,14.1040239227913,7.86348596804828,31.4010525587592,1.09220686065086,1.05506791291381,3.21792517696121,2.65117900582333,6.05092631806598,3.01347264011988,2.19093027116212,2.43966399395253,0.61560529038394,2.65200898617529,2.19418305034661,1.14494394852423,1.91624195102038,1.00434111675842,3.20936304141395,2.95562122019805,2.75487734597877,1.96682138424452,3.45446458287491,1.70297735647684,2.75826367343678,3.614471025339,1.84877005083394,2.40148321798935,4.54941543959749,1.17440175733939,4.43196326825502,1.60435557976113,2.38711957787437,1.11957737119962,0.971680998056939,0.515151135268373,0.872389432677388,0.755751887377619,1.4555043671269,0.232429036905685,0.822335776043652,1.23882548358041,1.43846196161075,0.768482119587302,0.236482229888585,0.344745680736619,1.29096936716765,0,0.564727018627814,0.272906150057846,0.224723484445085,0.612167784741805,0.320929027076094,1.27867425159808,2.96866170168044,1.19678194572979,0.426224750532694,0,0,0,2.00998932205395,2.60741459210101,1.3031330682307,0,0.736555271975129,0.949387162322653,4.01385043992689,4.889898899196,3.14487968262564,3.25753030324836,2.70318407114711,3.85741408072992,5.13022938734247,3.9783335439818,3.65328307529268,1.75996244461323,3.82297027883492,3.55803701545422,2.98711155796555,3.2031678962881,1.14950487990897,2.64417949113945,1.90810750907073,1.1384259382189,1.76171156811282,2.29363936875137,0,1.68152568894461,1.58030450865046,2.16380747125216,1.57204305099666,3.70082698199117,4.34684888015763,1.62961133316795,3.31413464014313,3.89653456815823,2.78526142212934,4.12448270464772,2.87994062958707,1.62482318259009,3.0741916734162,4.29195846947598,1.64437904603676,2.76350017785848,3.47763702882063,2.52087157375503,2.40786745280742,4.18142095219907,3.39928028092699,3.06576394881537,2.40539211837841,4.04831507231205,0.95569624297229,2.60433381542567,1.90090408889675,3.312652619711,2.30375900077953,0,2.13099526839615,0.821127996921047,2.21767417547206,1.60464117470104,2.46201486600758,2.43806866313962,2.01210257911091,2.17366355134002,3.97583067623023,3.00802746381534,5.35932120155048,0.795285947051099,6.8128881842369,1.79616152611729,1.55210578223795,2.0202000709419,7.07287007687648,11.2931539370688,7.41568885568859,1.62273696827342,1.0447784237956,1.99436940778298,1.66943437013739,4.57595928624102,1.48583000531826,1.98762407366705,1.72046919021225,2.77712401286075,3.95715559346807,1.67799774483962,0.825354125820202,3.13492449805216,3.10100111003195,1.06729878806013,2.00832367658802,1.61131726843659,6.84244895146661,3.90499292077071,1.83831540172934,0,1.87529429396568,2.91888184414021,2.81528701208306,1.53316637465883,7.59412527654503,2.19842092716489,2.63560834872127,3.87780264148325,4.36094052142534,3.47880366186723,3.92554586160197,13.2409180813219,3.72887606973458,3.90135220418193,5.04609840128076,4.2699598291882,1.72667283892012,2.17847724779836,1.34710672069688,0.490385709340376,2.27036141467397,1.15235184896,13.5906430463602,9.98912245857026,13.1208518955223,11.2086510413851,2.70099346880659,4.85618833104395,4.6348766211742,6.94124182266637,3.68502951935304,6.09622108937016,3.56400857184616,5.68713937340681,12.7422590671324,23.7143986799359,4.04006673489759,4.37914819551875,7.20366700258876,1.31693286264251,6.43624371177941,3.90618953157152,1.92834711372036,5.38168907066586,2.77624605464138,9.96079935449941,4.80145753735044,7.72893969288292,6.1833729610951,3.90845398296339,4.21940830603166,2.43592512902997,5.04867548488229,5.98324341174946,7.59736467048416,4.26011511019937,3.22406714328449,5.59549954624609,2.12586938479627,4.09119180886252,4.58887352622406,1.58565817968474,1.98794652482228,1.39432731443422,1.96956004529204,2.77552935963191,0,10.9514672630871,7.07565032012174,9.66944449467364,4.17931135228781,4.33127689001751,0,0.168584690078102,0.241011029883482,0.661763836394364,0.21787944409240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,2.13773924212448,4.31906027813771,0,5.83495976280443,4.55539021265503,0.829169439458779,1.44806194206653,2.55880778281177,0,4.65040150819244,5.15220128655621,3.58821960257963,2.03670906490128,1.21270313374932,3.26575121845442,2.05339980651169,5.18610808212324,3.29922144806311,0.665320713092027,3.25613074443898,4.48254852686405,7.7228912914776,3.14388207373054,0,2.5670703278402,0.406896178315738,0.665756774185513,2.41528552309231,5.77023286145819|short_description=p2@SLC25A22}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=79751 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19954 | |||
|TSSclassifier=W | |||
|UniProt=E9PP01,E9PN26,Q9H936 | |||
|association_with_transcript=0bp_to_ENST00000528606,ENST00000530360,ENST00000532361,ENST00000532459,NM_024698,uc001lri.2,uc009ycj.2_5end | |||
|description=CAGE_peak_2_at_SLC25A22_5end | |||
|id=chr11:796197..796263,- | |||
|ontology_enrichment_celltype=CL:0000192!5.93e-07!42;CL:0000514!5.93e-07!42 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,8.06e-07,43;CL:0000514,8.06e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.63e-10!365;UBERON:0003102!6.05e-10!95;UBERON:0002199!7.70e-08!45;UBERON:0002416!7.70e-08!45;UBERON:0005256!6.77e-07!143 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,5.30e-10,99;UBERON:0002199,4.69e-08,46;UBERON:0002416,4.69e-08,46 | |||
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| |||
|short_description=p2@SLC25A22 | |||
}} |
Revision as of 19:52, 10 September 2013
Short description: | p2@SLC25A22 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_SLC25A22_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000528606, ENST00000530360, ENST00000532361, ENST00000532459, NM_024698, uc001lri.2, uc009ycj.2_5end |
EntrezGene: | SLC25A22 |
HGNC: | 19954 |
UniProt: | E9PP01E9PN26Q9H936 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 8.06e-07 | 43 |
smooth muscle myoblast | 8.06e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
surface structure | 5.30e-10 | 99 |
integument | 4.69e-08 | 46 |
integumental system | 4.69e-08 | 46 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.