FFCP PHASE1:Hg19::chr10:129848454..129848458,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C13|description=CAGE_peak_at_chr10:129848454..129848458,+|id=chr10:129848454..129848458,+|ontology_enrichment_celltype=CL:0000766!2.95e-22!76;CL:0000738!4.12e-22!140;CL:0000037!3.50e-18!172;CL:0000566!3.50e-18!172;CL:0002087!4.38e-18!119;CL:0002057!5.64e-17!42;CL:0002032!7.17e-17!165;CL:0000837!7.17e-17!165;CL:0002031!2.00e-16!124;CL:0000988!3.15e-16!182;CL:0000839!4.36e-16!70;CL:0000557!1.01e-15!71;CL:0002194!2.42e-15!63;CL:0000576!2.42e-15!63;CL:0000040!2.42e-15!63;CL:0000559!2.42e-15!63;CL:0000860!2.47e-15!45;CL:0000763!8.22e-15!112;CL:0000049!8.22e-15!112;CL:0002009!1.35e-14!65;CL:0000094!6.00e-08!8|ontology_enrichment_celltype_v019=CL:0000775;1.33e-27;3!CL:0000623;5.06e-27;3!CL:0000094;5.50e-18;8!CL:0002393;7.47e-14;6!CL:0002397;7.47e-14;6!CL:0000081;3.84e-13;11!CL:0000576;5.03e-10;48!CL:0000738;5.20e-08;136!CL:0000860;1.18e-07;33!CL:0002057;1.18e-07;33!CL:0000766;1.36e-07;69|ontology_enrichment_celltype_v019_2=CL:0000775,1.12e-27,3;CL:0000623,5.54e-27,3;CL:0000825,5.54e-27,3;CL:0000738,2.89e-22,136;CL:0000766,6.12e-21,72;CL:0002032,2.44e-18,161;CL:0000837,2.44e-18,161;CL:0000094,4.83e-18,8;CL:0000037,1.90e-17,168;CL:0000988,2.11e-16,177;CL:0002087,2.12e-16,115;CL:0002031,1.31e-15,120;CL:0000860,2.25e-15,42;CL:0002057,2.25e-15,42;CL:0000473,2.70e-13,48;CL:0000234,2.70e-13,48;CL:0000763,3.07e-13,108;CL:0000049,3.07e-13,108;CL:0000081,3.50e-13,11;CL:0002194,7.62e-13,59;CL:0000576,7.62e-13,59;CL:0000040,7.62e-13,59;CL:0000559,7.62e-13,59;CL:0002009,2.21e-12,61;CL:0000839,2.41e-11,66;CL:0000557,3.73e-11,67;CL:0002393,2.29e-09,9;CL:0002397,2.29e-09,9|ontology_enrichment_development_v019=CL:0002057;4.04e-11;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!9.40e-20!102;UBERON:0003061!9.40e-20!102;UBERON:0002193!9.60e-19!112;UBERON:0002371!5.27e-15!80;UBERON:0001474!2.98e-13!86;UBERON:0004765!1.35e-10!101;UBERON:0001434!1.35e-10!101;UBERON:0002405!1.93e-09!115;UBERON:0007023!2.48e-08!115;UBERON:0000178!7.03e-08!15;UBERON:0000179!7.03e-08!15;UBERON:0000463!7.03e-08!15|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.67e-12,98;UBERON:0003061,1.67e-12,98;UBERON:0002193,3.72e-11,108;UBERON:0002371,1.13e-09,76;UBERON:0001474,7.29e-09,82;UBERON:0004765,5.97e-08,90;UBERON:0002405,1.20e-07,93;UBERON:0001434,5.16e-07,100|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0.164201178899891,0.0787107813136792,0.393364276848904,0,0.464448369948228,0,0,0,0,0,0,1.10799081706375,5.81578897663411,4.55722828503289,0.223915474239924,0,0,0.581592955118259,0.377875943688809,0.242584061187816,1.16214518452842,0,0,2.01384674625505,0,0,0.344745680736619,0.645484683583826,0,0.941211697713023,0.272906150057846,0,1.53041946185451,0,0,0,0.398927315243264,0,1.16083695451434,0,0,2.00998932205395,1.5644487552606,0,0.605399502633369,0,0,0,0.212604299965044,0,0.336985893439485,0.450530678524519,0.48217676009124,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0.393419540227666,1.17903228824749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,3.20928234940209,2.17236605824198,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.0654895377488563,0,0,0,0,1.46253756570752,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0.115930404975077,0,0,0,0.380508304469197,0,0,0,0.234004265139238,0.594524649154913,0,0,0,0.0895585227028483,0,0,0,0,0.207328115540772,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,1.18218456121156,3.01878604803324,5.13372145118993,0,0,0,0,0,7.49007023947182,14.9580729602012,2.90090859405225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.862856803274467,0.853820462427555,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0.764637207142375,1.70894156152249,0.238231775457789,0,0,1.08006287447623,2.37937552888281,0,0,0,0,0,0.0711418433484141,0.159426272728822,0,0,0.211673582723883,0,0.561594356226918,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0.562677665642051,0,0,0,0.597743964753209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0.33173777979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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_at_chr10:129848454..129848458,+ | |||
|id=chr10:129848454..129848458,+ | |||
|ontology_enrichment_celltype=CL:0000766!2.95e-22!76;CL:0000738!4.12e-22!140;CL:0000037!3.50e-18!172;CL:0000566!3.50e-18!172;CL:0002087!4.38e-18!119;CL:0002057!5.64e-17!42;CL:0002032!7.17e-17!165;CL:0000837!7.17e-17!165;CL:0002031!2.00e-16!124;CL:0000988!3.15e-16!182;CL:0000839!4.36e-16!70;CL:0000557!1.01e-15!71;CL:0002194!2.42e-15!63;CL:0000576!2.42e-15!63;CL:0000040!2.42e-15!63;CL:0000559!2.42e-15!63;CL:0000860!2.47e-15!45;CL:0000763!8.22e-15!112;CL:0000049!8.22e-15!112;CL:0002009!1.35e-14!65;CL:0000094!6.00e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0000775;1.33e-27;3!CL:0000623;5.06e-27;3!CL:0000094;5.50e-18;8!CL:0002393;7.47e-14;6!CL:0002397;7.47e-14;6!CL:0000081;3.84e-13;11!CL:0000576;5.03e-10;48!CL:0000738;5.20e-08;136!CL:0000860;1.18e-07;33!CL:0002057;1.18e-07;33!CL:0000766;1.36e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,1.12e-27,3;CL:0000623,5.54e-27,3;CL:0000825,5.54e-27,3;CL:0000738,2.89e-22,136;CL:0000766,6.12e-21,72;CL:0002032,2.44e-18,161;CL:0000837,2.44e-18,161;CL:0000094,4.83e-18,8;CL:0000037,1.90e-17,168;CL:0000988,2.11e-16,177;CL:0002087,2.12e-16,115;CL:0002031,1.31e-15,120;CL:0000860,2.25e-15,42;CL:0002057,2.25e-15,42;CL:0000473,2.70e-13,48;CL:0000234,2.70e-13,48;CL:0000763,3.07e-13,108;CL:0000049,3.07e-13,108;CL:0000081,3.50e-13,11;CL:0002194,7.62e-13,59;CL:0000576,7.62e-13,59;CL:0000040,7.62e-13,59;CL:0000559,7.62e-13,59;CL:0002009,2.21e-12,61;CL:0000839,2.41e-11,66;CL:0000557,3.73e-11,67;CL:0002393,2.29e-09,9;CL:0002397,2.29e-09,9 | |||
|ontology_enrichment_development_v019=CL:0002057;4.04e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.40e-20!102;UBERON:0003061!9.40e-20!102;UBERON:0002193!9.60e-19!112;UBERON:0002371!5.27e-15!80;UBERON:0001474!2.98e-13!86;UBERON:0004765!1.35e-10!101;UBERON:0001434!1.35e-10!101;UBERON:0002405!1.93e-09!115;UBERON:0007023!2.48e-08!115;UBERON:0000178!7.03e-08!15;UBERON:0000179!7.03e-08!15;UBERON:0000463!7.03e-08!15 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.67e-12,98;UBERON:0003061,1.67e-12,98;UBERON:0002193,3.72e-11,108;UBERON:0002371,1.13e-09,76;UBERON:0001474,7.29e-09,82;UBERON:0004765,5.97e-08,90;UBERON:0002405,1.20e-07,93;UBERON:0001434,5.16e-07,100 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0.164201178899891,0.0787107813136792,0.393364276848904,0,0.464448369948228,0,0,0,0,0,0,1.10799081706375,5.81578897663411,4.55722828503289,0.223915474239924,0,0,0.581592955118259,0.377875943688809,0.242584061187816,1.16214518452842,0,0,2.01384674625505,0,0,0.344745680736619,0.645484683583826,0,0.941211697713023,0.272906150057846,0,1.53041946185451,0,0,0,0.398927315243264,0,1.16083695451434,0,0,2.00998932205395,1.5644487552606,0,0.605399502633369,0,0,0,0.212604299965044,0,0.336985893439485,0.450530678524519,0.48217676009124,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0.393419540227666,1.17903228824749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,3.20928234940209,2.17236605824198,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.0654895377488563,0,0,0,0,1.46253756570752,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0.115930404975077,0,0,0,0.380508304469197,0,0,0,0.234004265139238,0.594524649154913,0,0,0,0.0895585227028483,0,0,0,0,0.207328115540772,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,1.18218456121156,3.01878604803324,5.13372145118993,0,0,0,0,0,7.49007023947182,14.9580729602012,2.90090859405225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.862856803274467,0.853820462427555,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0.764637207142375,1.70894156152249,0.238231775457789,0,0,1.08006287447623,2.37937552888281,0,0,0,0,0,0.0711418433484141,0.159426272728822,0,0,0.211673582723883,0,0.561594356226918,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0.562677665642051,0,0,0,0.597743964753209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0.331737779793674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0.293977192243133,0.0870592065804026,0,0.343972064943233,0,0,0,0,0,0.225980740780532,0.137041924646751,0,0.0633107959558787,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0.717873024576814,0.199679000498991,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.121499113316049,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0.314108192500469,0.886068179966986,0,0.500763722825999,0,0.443716206147409,0.248385611765534,0,0,0,0,0,0,0,0,0.233713309847224,0,0.378806010550178,0.251567901752575,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0.159633859057151,0,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0,0.236387681767936,0.222462803784138,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0.647428837187895,0,0,0,0,0,0,0.45178432815584,0,0,0,0,0,0,0,0.392616934229891,0.594092800654172,0,0,0,0.128915775947154,0,0,0,0,0,0,0.430018749454354,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0.0673520530145875,0,0,0,0,0,0.0898252021065869,0,0.244482888365733,0,0,0.201273793591026,0 | |||
|short_description=p@chr10:129848454..129848458,+ | |||
}} |
Revision as of 12:21, 10 September 2013
Short description: | p@chr10:129848454..129848458, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:129848454..129848458, + |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 1.12e-27 | 3 |
natural killer cell | 5.54e-27 | 3 |
pro-NK cell | 5.54e-27 | 3 |
leukocyte | 2.89e-22 | 136 |
myeloid leukocyte | 6.12e-21 | 72 |
hematopoietic oligopotent progenitor cell | 2.44e-18 | 161 |
hematopoietic multipotent progenitor cell | 2.44e-18 | 161 |
granulocyte | 4.83e-18 | 8 |
hematopoietic stem cell | 1.90e-17 | 168 |
hematopoietic cell | 2.11e-16 | 177 |
nongranular leukocyte | 2.12e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 1.31e-15 | 120 |
classical monocyte | 2.25e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.25e-15 | 42 |
defensive cell | 2.70e-13 | 48 |
phagocyte | 2.70e-13 | 48 |
myeloid cell | 3.07e-13 | 108 |
common myeloid progenitor | 3.07e-13 | 108 |
blood cell | 3.50e-13 | 11 |
monopoietic cell | 7.62e-13 | 59 |
monocyte | 7.62e-13 | 59 |
monoblast | 7.62e-13 | 59 |
promonocyte | 7.62e-13 | 59 |
macrophage dendritic cell progenitor | 2.21e-12 | 61 |
myeloid lineage restricted progenitor cell | 2.41e-11 | 66 |
granulocyte monocyte progenitor cell | 3.73e-11 | 67 |
intermediate monocyte | 2.29e-09 | 9 |
CD14-positive, CD16-positive monocyte | 2.29e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.67e-12 | 98 |
blood island | 1.67e-12 | 98 |
hemolymphoid system | 3.72e-11 | 108 |
bone marrow | 1.13e-09 | 76 |
bone element | 7.29e-09 | 82 |
skeletal element | 5.97e-08 | 90 |
immune system | 1.20e-07 | 93 |
skeletal system | 5.16e-07 | 100 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.