FFCP PHASE1:Hg19::chr10:119134918..119134986,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=118987 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26974 | |||
|TSSclassifier=S | |||
|UniProt=Q8NEN9 | |||
|association_with_transcript=0bp_to_ENST00000334464,NM_173791,uc001lde.1_5end | |||
|description=CAGE_peak_1_at_PDZD8_5end | |||
|id=chr10:119134918..119134986,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p1@PDZD8 | |||
}} |
Revision as of 11:58, 10 September 2013
Short description: | p1@PDZD8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_PDZD8_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000334464, NM_173791, uc001lde.1_5end |
EntrezGene: | PDZD8 |
HGNC: | 26974 |
UniProt: | Q8NEN9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 3.60e-30 | 114 |
neural tube | 7.66e-18 | 56 |
neural rod | 7.66e-18 | 56 |
future spinal cord | 7.66e-18 | 56 |
neural keel | 7.66e-18 | 56 |
regional part of nervous system | 9.57e-17 | 53 |
regional part of brain | 9.57e-17 | 53 |
central nervous system | 7.52e-16 | 81 |
regional part of forebrain | 1.91e-15 | 41 |
forebrain | 1.91e-15 | 41 |
anterior neural tube | 1.91e-15 | 41 |
future forebrain | 1.91e-15 | 41 |
nervous system | 1.48e-14 | 89 |
brain | 3.12e-14 | 68 |
future brain | 3.12e-14 | 68 |
brain grey matter | 3.42e-13 | 34 |
gray matter | 3.42e-13 | 34 |
telencephalon | 4.74e-13 | 34 |
neural plate | 2.15e-12 | 82 |
presumptive neural plate | 2.15e-12 | 82 |
regional part of telencephalon | 3.77e-12 | 32 |
cerebral hemisphere | 5.21e-12 | 32 |
neurectoderm | 8.24e-12 | 86 |
organ system subdivision | 2.21e-11 | 223 |
ecto-epithelium | 8.26e-11 | 104 |
pre-chordal neural plate | 4.44e-10 | 61 |
ectoderm-derived structure | 2.14e-09 | 171 |
ectoderm | 2.14e-09 | 171 |
presumptive ectoderm | 2.14e-09 | 171 |
cerebral cortex | 5.90e-09 | 25 |
pallium | 5.90e-09 | 25 |
regional part of cerebral cortex | 2.03e-08 | 22 |
neocortex | 1.07e-07 | 20 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.