FFCP PHASE1:Hg19::chr10:115803650..115803661,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=153|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=285|TSSclassifier=S|UniProt=P08588|association_with_transcript=-144bp_to_ENST00000369295,NM_000684,uc001lba.2_5end|coexpression_cluster_id=C73|description=CAGE_peak_4_at_ADRB1_5end|id=chr10:115803650..115803661,+|ontology_enrichment_celltype=CL:0005020!8.04e-08!6;CL:0002138!8.04e-08!6;CL:0005022!8.04e-08!6|ontology_enrichment_celltype_v019=CL:0002138;4.74e-07;6!CL:0002144;5.57e-07;3|ontology_enrichment_celltype_v019_2=CL:0002144,5.02e-07,3;CL:0005020,5.85e-07,6;CL:0002138,5.85e-07,6;CL:0005022,5.85e-07,6|ontology_enrichment_development_v019=UBERON:0005062;6.19e-11;4!UBERON:0007284;6.19e-11;4!CL:0005022;4.74e-07;6|ontology_enrichment_disease=DOID:171!1.20e-07!10|ontology_enrichment_disease_v019=DOID:171;3.92e-11;10!DOID:114;2.07e-10;2|ontology_enrichment_disease_v019_2=DOID:171,3.61e-11,10;DOID:114,2.22e-10,2|ontology_enrichment_uberon=UBERON:0007023!4.04e-51!115;UBERON:0001049!1.15e-31!57;UBERON:0005068!1.15e-31!57;UBERON:0006241!1.15e-31!57;UBERON:0007135!1.15e-31!57;UBERON:0003080!4.84e-30!42;UBERON:0002780!6.80e-29!41;UBERON:0001890!6.80e-29!41;UBERON:0006240!6.80e-29!41;UBERON:0002346!5.29e-28!90;UBERON:0002616!1.34e-25!59;UBERON:0001893!1.48e-25!34;UBERON:0002791!1.52e-24!33;UBERON:0003075!2.85e-24!86;UBERON:0007284!2.85e-24!86;UBERON:0001869!4.41e-24!32;UBERON:0002020!2.02e-23!34;UBERON:0003528!2.02e-23!34;UBERON:0000955!4.28e-22!69;UBERON:0006238!4.28e-22!69;UBERON:0001017!9.57e-22!82;UBERON:0005743!3.27e-21!86;UBERON:0000073!4.27e-21!94;UBERON:0001016!4.27e-21!94;UBERON:0002619!1.96e-20!22;UBERON:0003056!2.67e-19!61;UBERON:0001950!1.32e-18!20;UBERON:0000956!3.07e-17!25;UBERON:0000203!3.07e-17!25;UBERON:0000924!8.53e-15!173;UBERON:0006601!8.53e-15!173;UBERON:0000153!3.78e-14!129;UBERON:0007811!3.78e-14!129;UBERON:0000033!2.29e-13!123;UBERON:0004121!1.67e-12!169;UBERON:0004111!5.19e-12!241;UBERON:0002420!2.03e-10!9;UBERON:0007245!2.03e-10!9;UBERON:0010009!2.03e-10!9;UBERON:0010011!2.03e-10!9;UBERON:0000454!2.03e-10!9;UBERON:0000025!2.66e-10!194;UBERON:0000477!4.62e-09!286;UBERON:0009663!2.77e-08!7;UBERON:0000200!7.94e-08!6;UBERON:0001871!8.67e-08!7;UBERON:0002308!1.23e-07!9;UBERON:0000125!1.23e-07!9|ontology_enrichment_uberon_v019=UBERON:0004151;1.75e-14;3!UBERON:0003978;2.00e-14;3!UBERON:0000946;2.00e-14;3!UBERON:0001905;9.62e-11;2!UBERON:0002757;9.62e-11;2!UBERON:0010134;9.62e-11;2!UBERON:0005408;9.62e-11;2!UBERON:0001899;9.62e-11;2!UBERON:0002346;1.22e-10;4!UBERON:0000923;1.22e-10;4!UBERON:0010316;1.22e-10;4!UBERON:0005291;1.22e-10;4!UBERON:0007100;1.50e-10;25!UBERON:0002133;3.83e-10;2!UBERON:0002081;4.49e-10;2!UBERON:0002050;1.34e-08;5!UBERON:0005423;1.34e-08;5!UBERON:0010523;5.57e-07;3!UBERON:0001915;5.57e-07;3!UBERON:0001982;5.57e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.22e-15,114;UBERON:0004151,1.92e-14,3;UBERON:0003978,2.20e-14,3;UBERON:0009751,2.20e-14,3;UBERON:0000946,2.20e-14,3;UBERON:0002523,2.20e-14,3;UBERON:0005983,2.20e-14,3;UBERON:0002165,2.20e-14,3;UBERON:0002062,2.20e-14,3;UBERON:0007280,2.20e-14,3;UBERON:0001905,9.63e-11,2;UBERON:0002757,9.63e-11,2;UBERON:0010134,9.63e-11,2;UBERON:0005408,9.63e-11,2;UBERON:0001899,9.63e-11,2;UBERON:0002133,4.39e-10,2;UBERON:0002081,5.03e-10,2;UBERON:0010227,5.03e-10,2;UBERON:0007100,1.29e-09,27;UBERON:0002346,2.66e-09,86;UBERON:0002780,1.73e-08,41;UBERON:0001890,1.73e-08,41;UBERON:0003080,1.73e-08,41;UBERON:0006240,1.73e-08,41;UBERON:0010523,5.02e-07,3;UBERON:0001915,5.02e-07,3;UBERON:0001982,5.02e-07,3;UBERON:0002791,5.20e-07,32;UBERON:0001869,5.20e-07,32|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0.369754010166788,0,0,0,0,0.401088894940283,0.434021741431704,0,0,0,0,0.377875943688809,0,0,0,0,0,0.512321413058201,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0.199463657621632,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0.44931452458598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.916853528483988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516833518338658,0.35576626268671,0.66944122552934,0.805658634218294,3.80136052859256,2.4406205754817,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02113026865503,1.38895653772983,2.09279567458058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784596007954691,0.197030760201927,0.431255149719035,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16386124460217,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=153 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=285 | |||
|TSSclassifier=S | |||
|UniProt=P08588 | |||
|association_with_transcript=-144bp_to_ENST00000369295,NM_000684,uc001lba.2_5end | |||
|coexpression_cluster_id=C73 | |||
|description=CAGE_peak_4_at_ADRB1_5end | |||
|id=chr10:115803650..115803661,+ | |||
|ontology_enrichment_celltype=CL:0005020!8.04e-08!6;CL:0002138!8.04e-08!6;CL:0005022!8.04e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0002138;4.74e-07;6!CL:0002144;5.57e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002144,5.02e-07,3;CL:0005020,5.85e-07,6;CL:0002138,5.85e-07,6;CL:0005022,5.85e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0005062;6.19e-11;4!UBERON:0007284;6.19e-11;4!CL:0005022;4.74e-07;6 | |||
|ontology_enrichment_disease=DOID:171!1.20e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:171;3.92e-11;10!DOID:114;2.07e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:171,3.61e-11,10;DOID:114,2.22e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.04e-51!115;UBERON:0001049!1.15e-31!57;UBERON:0005068!1.15e-31!57;UBERON:0006241!1.15e-31!57;UBERON:0007135!1.15e-31!57;UBERON:0003080!4.84e-30!42;UBERON:0002780!6.80e-29!41;UBERON:0001890!6.80e-29!41;UBERON:0006240!6.80e-29!41;UBERON:0002346!5.29e-28!90;UBERON:0002616!1.34e-25!59;UBERON:0001893!1.48e-25!34;UBERON:0002791!1.52e-24!33;UBERON:0003075!2.85e-24!86;UBERON:0007284!2.85e-24!86;UBERON:0001869!4.41e-24!32;UBERON:0002020!2.02e-23!34;UBERON:0003528!2.02e-23!34;UBERON:0000955!4.28e-22!69;UBERON:0006238!4.28e-22!69;UBERON:0001017!9.57e-22!82;UBERON:0005743!3.27e-21!86;UBERON:0000073!4.27e-21!94;UBERON:0001016!4.27e-21!94;UBERON:0002619!1.96e-20!22;UBERON:0003056!2.67e-19!61;UBERON:0001950!1.32e-18!20;UBERON:0000956!3.07e-17!25;UBERON:0000203!3.07e-17!25;UBERON:0000924!8.53e-15!173;UBERON:0006601!8.53e-15!173;UBERON:0000153!3.78e-14!129;UBERON:0007811!3.78e-14!129;UBERON:0000033!2.29e-13!123;UBERON:0004121!1.67e-12!169;UBERON:0004111!5.19e-12!241;UBERON:0002420!2.03e-10!9;UBERON:0007245!2.03e-10!9;UBERON:0010009!2.03e-10!9;UBERON:0010011!2.03e-10!9;UBERON:0000454!2.03e-10!9;UBERON:0000025!2.66e-10!194;UBERON:0000477!4.62e-09!286;UBERON:0009663!2.77e-08!7;UBERON:0000200!7.94e-08!6;UBERON:0001871!8.67e-08!7;UBERON:0002308!1.23e-07!9;UBERON:0000125!1.23e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0004151;1.75e-14;3!UBERON:0003978;2.00e-14;3!UBERON:0000946;2.00e-14;3!UBERON:0001905;9.62e-11;2!UBERON:0002757;9.62e-11;2!UBERON:0010134;9.62e-11;2!UBERON:0005408;9.62e-11;2!UBERON:0001899;9.62e-11;2!UBERON:0002346;1.22e-10;4!UBERON:0000923;1.22e-10;4!UBERON:0010316;1.22e-10;4!UBERON:0005291;1.22e-10;4!UBERON:0007100;1.50e-10;25!UBERON:0002133;3.83e-10;2!UBERON:0002081;4.49e-10;2!UBERON:0002050;1.34e-08;5!UBERON:0005423;1.34e-08;5!UBERON:0010523;5.57e-07;3!UBERON:0001915;5.57e-07;3!UBERON:0001982;5.57e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.22e-15,114;UBERON:0004151,1.92e-14,3;UBERON:0003978,2.20e-14,3;UBERON:0009751,2.20e-14,3;UBERON:0000946,2.20e-14,3;UBERON:0002523,2.20e-14,3;UBERON:0005983,2.20e-14,3;UBERON:0002165,2.20e-14,3;UBERON:0002062,2.20e-14,3;UBERON:0007280,2.20e-14,3;UBERON:0001905,9.63e-11,2;UBERON:0002757,9.63e-11,2;UBERON:0010134,9.63e-11,2;UBERON:0005408,9.63e-11,2;UBERON:0001899,9.63e-11,2;UBERON:0002133,4.39e-10,2;UBERON:0002081,5.03e-10,2;UBERON:0010227,5.03e-10,2;UBERON:0007100,1.29e-09,27;UBERON:0002346,2.66e-09,86;UBERON:0002780,1.73e-08,41;UBERON:0001890,1.73e-08,41;UBERON:0003080,1.73e-08,41;UBERON:0006240,1.73e-08,41;UBERON:0010523,5.02e-07,3;UBERON:0001915,5.02e-07,3;UBERON:0001982,5.02e-07,3;UBERON:0002791,5.20e-07,32;UBERON:0001869,5.20e-07,32 | |||
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|short_description=p4@ADRB1 | |||
}} |
Revision as of 11:51, 10 September 2013
Short description: | p4@ADRB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_ADRB1_5end |
Coexpression cluster: | C73_pineal_eye_retina_caudate_cerebellum_left_parietal |
Association with transcript: | -144bp_to_ENST00000369295, NM_000684, uc001lba.2_5end |
EntrezGene: | ADRB1 |
HGNC: | 285 |
UniProt: | P08588 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
capillary endothelial cell | 5.02e-07 | 3 |
lymphangioblast | 5.85e-07 | 6 |
endothelial cell of lymphatic vessel | 5.85e-07 | 6 |
vascular lymphangioblast | 5.85e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
adult organism | 4.22e-15 | 114 |
cardiac chamber | 1.92e-14 | 3 |
valve | 2.20e-14 | 3 |
cardiac mesenchyme | 2.20e-14 | 3 |
cardial valve | 2.20e-14 | 3 |
tunica intima | 2.20e-14 | 3 |
heart layer | 2.20e-14 | 3 |
endocardium | 2.20e-14 | 3 |
endocardial cushion | 2.20e-14 | 3 |
presumptive endocardium | 2.20e-14 | 3 |
pineal body | 9.63e-11 | 2 |
regional part of epithalamus | 9.63e-11 | 2 |
secretory circumventricular organ | 9.63e-11 | 2 |
circumventricular organ | 9.63e-11 | 2 |
epithalamus | 9.63e-11 | 2 |
atrioventricular valve | 4.39e-10 | 2 |
cardiac atrium | 5.03e-10 | 2 |
future cardiac atrium | 5.03e-10 | 2 |
primary circulatory organ | 1.29e-09 | 27 |
neurectoderm | 2.66e-09 | 86 |
regional part of forebrain | 1.73e-08 | 41 |
forebrain | 1.73e-08 | 41 |
anterior neural tube | 1.73e-08 | 41 |
future forebrain | 1.73e-08 | 41 |
microcirculatory vessel | 5.02e-07 | 3 |
endothelium of capillary | 5.02e-07 | 3 |
capillary | 5.02e-07 | 3 |
regional part of telencephalon | 5.20e-07 | 32 |
cerebral hemisphere | 5.20e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 3.61e-11 | 10 |
heart disease | 2.22e-10 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.