FFCP PHASE1:Hg19::chr10:112678976..112678989,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=92482|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=28093|TSSclassifier=S|UniProt=E9PIY9,E9PM41|association_with_transcript=-17bp_to_ENST00000447005,ENST00000454061_5end|description=CAGE_peak_3_at_BBIP1_5end|id=chr10:112678976..112678989,-|ontology_enrichment_celltype=CL:0000791!8.35e-12!18;CL:0000789!8.35e-12!18;CL:0002420!8.35e-12!18;CL:0002419!8.35e-12!18;CL:0000790!8.35e-12!18;CL:0000542!1.27e-11!53;CL:0000051!1.27e-11!53;CL:0000838!2.46e-11!52;CL:0000738!5.36e-10!140;CL:0000084!3.01e-09!25;CL:0000827!3.01e-09!25;CL:0002087!1.72e-08!119;CL:0000625!2.44e-08!11;CL:0002031!8.29e-08!124|ontology_enrichment_celltype_v019=CL:0000791;7.57e-19;18!CL:0000789;7.57e-19;18!CL:0002419;7.57e-19;18!CL:0000625;1.10e-13;11!CL:0000084;3.58e-13;25!CL:0000542;2.31e-10;53!CL:0000624;2.79e-08;6|ontology_enrichment_celltype_v019_2=CL:0000791,6.50e-19,18;CL:0000789,6.50e-19,18;CL:0002420,6.50e-19,18;CL:0002419,6.50e-19,18;CL:0000790,6.50e-19,18;CL:0000542,1.58e-16,53;CL:0000051,1.58e-16,53;CL:0000838,4.99e-16,52;CL:0000625,6.96e-14,11;CL:0000084,5.38e-13,25;CL:0000827,5.38e-13,25;CL:0000738,1.06e-09,136;CL:0002087,5.81e-09,115;CL:0000624,3.75e-08,6;CL:0002031,1.73e-07,120|ontology_enrichment_development_v019=CL:0000790;7.57e-19;18!CL:0000051;2.31e-10;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!4.70e-14!115;UBERON:0001049!5.03e-07!57;UBERON:0005068!5.03e-07!57;UBERON:0006241!5.03e-07!57;UBERON:0007135!5.03e-07!57|ontology_enrichment_uberon_v019=UBERON:0000178;1.90e-08;15!UBERON:0000179;1.90e-08;15!UBERON:0000463;1.90e-08;15|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.22e-12,114;UBERON:0000178,3.55e-08,15;UBERON:0000179,3.55e-08,15;UBERON:0000463,3.55e-08,15;UBERON:0001049,1.38e-07,56;UBERON:0005068,1.38e-07,56;UBERON:0006241,1.38e-07,56;UBERON:0007135,1.38e-07,56|phase1_expression=0.54503513781167,1.07050261945492,1.55049844505568,1.0007329835313,0.446961094427288,0,0,0,0.261185628199839,0,0,0.218441372130172,0,0,0.331397375727916,0.672325146451775,0,0,0.487932798790507,0.61560529038394,0,0,1.14494394852423,0.547497700291537,0.251085279189606,0.687720651731561,0.821005894499457,1.18066171970519,0.786728553697808,0.767658796194425,1.08371286321253,0,0,0.369754010166788,1.39440961044543,0,0.587200878669695,1.10799081706375,0.802177789880567,1.95309783644267,0.895661896959697,0.971680998056939,0.515151135268373,0.436194716338694,0.755751887377619,0.242584061187816,0,0,0.309706370895104,0.863077176966451,0.768482119587302,0.709446689665756,1.03423704220986,0.645484683583826,1.35426486594342,0.752969358170419,0,0.449446968890169,1.22433556948361,0.641858054152187,0.639337125799041,0.989553900560148,0,0.426224750532694,1.45104619314292,1.13477044938228,0.622822248995575,0.75374599577023,0,0.868755378820466,1.81619850790011,1.10483290796269,1.26584954976354,0.422510572623884,0.850417199860174,0,0.786300418025466,0.150176892841506,0.32145117339416,1.42506371870624,0.59675003159727,0,0,4.91524750135918,2.66852776159066,2.98711155796555,2.40237592221607,0.574752439954483,0,0.954053754535364,1.70763890732835,2.93618594685469,1.14681968437569,0,1.68152568894461,0.790152254325231,2.16380747125216,2.75107533924415,2.05601498999509,1.83905144929746,4.23698946623668,6.62826928028627,1.94826728407911,1.22551502573691,2.3568472597987,2.65840673500345,3.79125409271022,1.79327847615945,1.43065282315866,1.64437904603676,1.93445012450094,1.73881851441031,4.89345658434799,4.28065324943541,7.31748666634838,2.15287751125376,3.44898444241729,4.81078423675682,3.28925599625354,2.22995790026868,2.60433381542567,2.85135613334512,5.42070428679982,4.73550461271348,7.49584359314075,3.55165878066025,6.56902397536837,2.01606743224732,1.60464117470104,2.89648807765598,0,0,0.255725123687061,0.722878304769133,0,0.869079113764942,0,0.973269740605272,0.472674085820339,0.443458794925128,0.351339142772504,1.44076983047484,0.364295288292542,0,0,0.348259474598534,0,0.238490624305342,0.571994910780128,1.11437250398869,0,0,0.347140501607594,0,0.419499436209906,0.275118041940067,0,0.516833518338658,0.35576626268671,1.00416183829401,0,0,0.488124115096339,1.10298924103761,0,0.17859945656816,0.22452937262617,0.112611480483322,0,0,0.366403487860815,1.31780417436063,0,0,0,0.506522046658319,0.529636723252875,0,0.709336764396714,0,0,0.74000264525148,0.933633106199299,0.269421344139376,0.326923806226917,0,0,0,0,0,0.149448680551801,0.469737994575059,0.161872944368132,0.561803226808994,0.204154171254893,0.245668634623536,0.413303124703062,0,0.247266929278557,0,0,1.68336113954066,0.125118519871964,0.277064115484183,0.438977620880838,0,0.600952235626387,0.113432183160021,0.89694817844431,0.85422955527427,0.635795703478686,0,1.13357782162283,0.515281080091258,0.558350568994769,0.675105328965065,0.487185025805993,0.504867548488229,0.644349290496095,0.80823028409406,1.06502877754984,0.906768884048762,0.6782423692419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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=92482 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28093 | |||
|TSSclassifier=S | |||
|UniProt=E9PIY9,E9PM41 | |||
|association_with_transcript=-17bp_to_ENST00000447005,ENST00000454061_5end | |||
|description=CAGE_peak_3_at_BBIP1_5end | |||
|id=chr10:112678976..112678989,- | |||
|ontology_enrichment_celltype=CL:0000791!8.35e-12!18;CL:0000789!8.35e-12!18;CL:0002420!8.35e-12!18;CL:0002419!8.35e-12!18;CL:0000790!8.35e-12!18;CL:0000542!1.27e-11!53;CL:0000051!1.27e-11!53;CL:0000838!2.46e-11!52;CL:0000738!5.36e-10!140;CL:0000084!3.01e-09!25;CL:0000827!3.01e-09!25;CL:0002087!1.72e-08!119;CL:0000625!2.44e-08!11;CL:0002031!8.29e-08!124 | |||
|ontology_enrichment_celltype_v019=CL:0000791;7.57e-19;18!CL:0000789;7.57e-19;18!CL:0002419;7.57e-19;18!CL:0000625;1.10e-13;11!CL:0000084;3.58e-13;25!CL:0000542;2.31e-10;53!CL:0000624;2.79e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,6.50e-19,18;CL:0000789,6.50e-19,18;CL:0002420,6.50e-19,18;CL:0002419,6.50e-19,18;CL:0000790,6.50e-19,18;CL:0000542,1.58e-16,53;CL:0000051,1.58e-16,53;CL:0000838,4.99e-16,52;CL:0000625,6.96e-14,11;CL:0000084,5.38e-13,25;CL:0000827,5.38e-13,25;CL:0000738,1.06e-09,136;CL:0002087,5.81e-09,115;CL:0000624,3.75e-08,6;CL:0002031,1.73e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000790;7.57e-19;18!CL:0000051;2.31e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.70e-14!115;UBERON:0001049!5.03e-07!57;UBERON:0005068!5.03e-07!57;UBERON:0006241!5.03e-07!57;UBERON:0007135!5.03e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.90e-08;15!UBERON:0000179;1.90e-08;15!UBERON:0000463;1.90e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.22e-12,114;UBERON:0000178,3.55e-08,15;UBERON:0000179,3.55e-08,15;UBERON:0000463,3.55e-08,15;UBERON:0001049,1.38e-07,56;UBERON:0005068,1.38e-07,56;UBERON:0006241,1.38e-07,56;UBERON:0007135,1.38e-07,56 | |||
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| |||
|short_description=p3@BBIP1 | |||
}} |
Revision as of 11:45, 10 September 2013
Short description: | p3@BBIP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_BBIP1_5end |
Coexpression cluster: | NA |
Association with transcript: | -17bp_to_ENST00000447005, ENST00000454061_5end |
EntrezGene: | BBIP1 |
HGNC: | 28093 |
UniProt: | E9PIY9E9PM41 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 6.50e-19 | 18 |
alpha-beta T cell | 6.50e-19 | 18 |
immature T cell | 6.50e-19 | 18 |
mature T cell | 6.50e-19 | 18 |
immature alpha-beta T cell | 6.50e-19 | 18 |
lymphocyte | 1.58e-16 | 53 |
common lymphoid progenitor | 1.58e-16 | 53 |
lymphoid lineage restricted progenitor cell | 4.99e-16 | 52 |
CD8-positive, alpha-beta T cell | 6.96e-14 | 11 |
T cell | 5.38e-13 | 25 |
pro-T cell | 5.38e-13 | 25 |
leukocyte | 1.06e-09 | 136 |
nongranular leukocyte | 5.81e-09 | 115 |
CD4-positive, alpha-beta T cell | 3.75e-08 | 6 |
hematopoietic lineage restricted progenitor cell | 1.73e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.22e-12 | 114 |
blood | 3.55e-08 | 15 |
haemolymphatic fluid | 3.55e-08 | 15 |
organism substance | 3.55e-08 | 15 |
neural tube | 1.38e-07 | 56 |
neural rod | 1.38e-07 | 56 |
future spinal cord | 1.38e-07 | 56 |
neural keel | 1.38e-07 | 56 |
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