FFCP PHASE1:Hg19::chr10:111629613..111629617,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=10198|TSSclassifier=N|UniProt=|association_with_transcript=0bp_to_ENST00000411347_5end|coexpression_cluster_id=C313|description=CAGE_peak_1_at_RNU4-5P_5end|id=chr10:111629613..111629617,+|ontology_enrichment_celltype=CL:0000860!9.95e-10!45;CL:0002057!8.12e-09!42|ontology_enrichment_celltype_v019=CL:0000860;6.07e-08;33!CL:0002057;6.07e-08;33|ontology_enrichment_celltype_v019_2=CL:0000860,5.46e-09,42;CL:0002057,5.46e-09,42;CL:0000473,4.28e-08,48;CL:0000234,4.28e-08,48|ontology_enrichment_development_v019=CL:0002057;3.66e-07;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0.363356758541113,10.4909256706582,0.140954404095971,13.009528785907,8.49226079411847,31.4041868676133,60.7919707603945,0,2.61185628199839,0.245733936501509,32.7966548947041,0.218441372130172,13.7158828678796,0.123766352960047,16.2384714106679,30.9269567367817,28.3266428171269,20.4486825308465,18.0535135552488,0.123121058076788,12.6480428571437,25.3898324397251,1.14494394852423,22.9949034122445,5.02170558379211,23.0768485358813,23.2344668143346,39.2766798755259,0.786728553697808,0.383829398097213,2.78669021968937,15.6301608161418,12.6506485886865,12.9413903558376,0.232401601740905,0.284338464974843,4.69760702935756,2.21598163412751,114.510879505451,26.4753262273339,0,0.32389366601898,0,48.4176135135951,23.806184452395,77.3843155189134,109.938934456389,33.7157668177897,30.6609307186153,125.146190660135,106.562853916106,4.25668013799453,52.0565977912294,37.4381116478619,75.8388324928314,49.8842199787902,18.5576182039335,2.69668181334102,69.7871274605658,1.60464513538047,47.310947309129,179.109256001387,36.5018493447586,60.5239145756426,60.3635216347455,34.0431134814684,67.2648028915221,61.3046743226454,75.093540252509,1.73751075764093,53.2751562317365,1.10483290796269,5.37986058649504,5.91514801673437,12.9688622978677,17.820984868212,8.42464733598713,6.30742949934327,0.16072558669708,5.70025487482497,22.079751169099,19.1797361452866,14.0796995569058,4.91524750135918,5.33705552318133,20.0563204606258,5.60554381850417,2.87376219977242,7.93253847341835,4.77026877267682,140.026390400924,147.396534532106,212.161641609502,6.60856642895129,1.12101712596307,15.8030450865046,0.196709770113833,94.3225830597995,29.8122173549288,8.3593247695339,5.86660079940463,9.46895611469466,107.154700624351,3.23090324967003,27.9875612101095,21.9318555637785,1.35401931882508,46.8814230195971,47.3416025117957,50.4824367133286,115.237957416699,1.44901542867526,7.41432815810302,20.8681845909976,77.3562876156828,4.87230173599535,6.89796888483458,3.09264700934367,1.77113784413652,5.41561204350964,6.51083453856419,8.55406840003537,0.602300476311091,0.511946444617674,4.99722906209383,1.89421801635213,0.821127996921047,0.604820229674197,67.3949293374438,22.1581337940682,163.350600430354,31.5229404060709,2.81297636055767,0,0.50133791063589,7.9665585428453,0,8.27279279514481,0.850813354476611,17.5166223995426,5.09441757020131,0,0,9.26961106961073,2.92092654289215,0.522389211897802,10.5036788809903,5.24679373471752,4.0039643754609,1.85728750664782,0,35.2696183993511,0,22.6123176769604,16.3604780121863,8.80377734208216,9.61376846069329,1.8089173141853,0,0,0.402829317109147,0,7.80998584154142,0,37.2665296025609,0.0892997282840798,3.81699933464489,2.36484109014977,39.8623257411296,0,6.41206103756425,1.31780417436063,0,0,11.4303548889923,0.25326102332916,6.22323149822128,86.9114960868906,6.38403087957043,8.97084160227691,0,7.64669400093196,0,4.04132016209064,2.12500474047496,0,17.2852777344,0.468642863667593,11.5499228427219,0,7.47243402759005,2.58355897016283,3.72307772046703,1.12360645361799,0,6.1417158655884,7.74943358818241,0,15.5778165445491,0,58.9266876289316,0,16.1402890634834,0,7.46261955497424,7.35570709917647,9.4649977111156,0.680593098960126,49.1527601787482,0.213557388818567,0,46.5141198930824,0,30.1439431853386,0.18611685633159,0.843881661206331,0,33.8261257487113,0,0.161646056818812,34.4359304741116,0.10075209822764,0,0.966304265816484,0,0.286804595389004,1.58565817968474,1.85541675650079,2.20768491452085,1.24393266018445,19.9333472191746,6.56959246336494,23.4674298494724,29.5890831568727,33.1523811245953,9.75172648867156,15.8813485967309,11.2391460037852,6.57480291304597,1.44606617930089,6.83822630940842,5.44698610231015,0.474541238222193,8.89886633857085,11.9695093726461,1.53898862778556,22.1446636387394,152.863533445756,0.4115740113314,77.9146170343372,98.8689271610281,74.6948684674996,25.4039659873004,40.1731420467332,0.245976877086227,0.171567810298526,0.219500570817251,0,3.51851403440708,0,0,66.555826257893,17.3197610430328,0.231860809950154,1.29149563659404,0.721832238805369,19.4453915282177,51.3686211033415,104.306980530624,42.0658219426488,0.738651018262192,0.234004265139238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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=10198 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000411347_5end | |||
|coexpression_cluster_id=C313 | |||
|description=CAGE_peak_1_at_RNU4-5P_5end | |||
|id=chr10:111629613..111629617,+ | |||
|ontology_enrichment_celltype=CL:0000860!9.95e-10!45;CL:0002057!8.12e-09!42 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.07e-08;33!CL:0002057;6.07e-08;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.46e-09,42;CL:0002057,5.46e-09,42;CL:0000473,4.28e-08,48;CL:0000234,4.28e-08,48 | |||
|ontology_enrichment_development_v019=CL:0002057;3.66e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p1@RNU4-5P | |||
}} |
Revision as of 11:40, 10 September 2013
Short description: | p1@RNU4-5P |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_RNU4-5P_5end |
Coexpression cluster: | C313_blood_CD19_Adipocyte_acute_Osteoblast_Cardiac_Neurons |
Association with transcript: | 0bp_to_ENST00000411347_5end |
EntrezGene: | NA |
HGNC: | 10198 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.46e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.46e-09 | 42 |
defensive cell | 4.28e-08 | 48 |
phagocyte | 4.28e-08 | 48 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.