FFCP PHASE1:Hg19::chr10:105793325..105793341,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C486|description=CAGE_peak_at_chr10:105793325..105793341,-|id=chr10:105793325..105793341,-|ontology_enrichment_celltype=CL:0000775!2.01e-08!3|ontology_enrichment_celltype_v019=CL:0000775;1.52e-87;3!CL:0000094;9.08e-34;8!CL:0000081;6.20e-25;11|ontology_enrichment_celltype_v019_2=CL:0000775,1.52e-87,3;CL:0000094,9.08e-34,8;CL:0000081,6.20e-25,11|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!4.70e-22!115;UBERON:0002020!8.71e-22!34;UBERON:0003528!8.71e-22!34;UBERON:0001049!1.04e-21!57;UBERON:0005068!1.04e-21!57;UBERON:0006241!1.04e-21!57;UBERON:0007135!1.04e-21!57;UBERON:0002780!7.25e-21!41;UBERON:0001890!7.25e-21!41;UBERON:0006240!7.25e-21!41;UBERON:0002616!7.37e-21!59;UBERON:0003080!2.60e-20!42;UBERON:0001869!9.90e-20!32;UBERON:0002791!4.43e-19!33;UBERON:0001893!1.82e-18!34;UBERON:0000955!4.76e-17!69;UBERON:0006238!4.76e-17!69;UBERON:0002619!1.87e-16!22;UBERON:0001017!1.20e-15!82;UBERON:0003075!5.69e-15!86;UBERON:0007284!5.69e-15!86;UBERON:0005743!9.34e-15!86;UBERON:0000956!2.22e-14!25;UBERON:0000203!2.22e-14!25;UBERON:0001950!2.83e-14!20;UBERON:0002346!3.85e-14!90;UBERON:0000153!5.35e-14!129;UBERON:0007811!5.35e-14!129;UBERON:0003056!3.48e-13!61;UBERON:0000073!5.03e-13!94;UBERON:0001016!5.03e-13!94;UBERON:0004177!3.90e-12!7;UBERON:0000369!5.96e-12!4;UBERON:0002435!5.96e-12!4;UBERON:0000204!5.96e-12!4;UBERON:0010082!5.96e-12!4;UBERON:0000033!6.95e-12!123;UBERON:0001872!6.15e-10!5;UBERON:0000349!6.96e-10!5;UBERON:0002420!3.42e-09!9;UBERON:0007245!3.42e-09!9;UBERON:0010009!3.42e-09!9;UBERON:0010011!3.42e-09!9;UBERON:0000454!3.42e-09!9;UBERON:0002308!3.57e-09!9;UBERON:0000125!3.57e-09!9;UBERON:0000200!5.11e-08!6;UBERON:0002106!6.89e-08!3;UBERON:0001896!6.89e-08!3;UBERON:0004854!6.89e-08!3;UBERON:0009034!6.89e-08!3;UBERON:0002095!6.89e-08!3;UBERON:0004782!6.89e-08!3;UBERON:0003281!6.89e-08!3;UBERON:0005290!6.89e-08!3;UBERON:0009664!6.89e-08!3;UBERON:0002296!6.89e-08!3;UBERON:0005602!6.89e-08!3;UBERON:0001179!6.89e-08!3;UBERON:0006293!6.89e-08!3;UBERON:0010096!6.89e-08!3;UBERON:0002771!1.11e-07!3;UBERON:0005383!1.11e-07!3;UBERON:0005382!1.11e-07!3;UBERON:0009663!5.01e-07!7|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.575384784644301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49801404789436,0,2.07207756718018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,8.61739426751628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.121499113316049,0,0,0.314727528809989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0.573409195690071,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781078098613847,0,0.19024743058172,0,0,0,0,0,0,0.336283722218824,0,0,0.0887023701626388,0,0,0,0.0657727735628491,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.644578879735772,0,0,0,0,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129177819672012,0.31037357147929,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr10:105793325..105793341,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C486 | |||
|description=CAGE_peak_at_chr10:105793325..105793341,- | |||
|id=chr10:105793325..105793341,- | |||
|ontology_enrichment_celltype=CL:0000775!2.01e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000775;1.52e-87;3!CL:0000094;9.08e-34;8!CL:0000081;6.20e-25;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,1.52e-87,3;CL:0000094,9.08e-34,8;CL:0000081,6.20e-25,11 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.70e-22!115;UBERON:0002020!8.71e-22!34;UBERON:0003528!8.71e-22!34;UBERON:0001049!1.04e-21!57;UBERON:0005068!1.04e-21!57;UBERON:0006241!1.04e-21!57;UBERON:0007135!1.04e-21!57;UBERON:0002780!7.25e-21!41;UBERON:0001890!7.25e-21!41;UBERON:0006240!7.25e-21!41;UBERON:0002616!7.37e-21!59;UBERON:0003080!2.60e-20!42;UBERON:0001869!9.90e-20!32;UBERON:0002791!4.43e-19!33;UBERON:0001893!1.82e-18!34;UBERON:0000955!4.76e-17!69;UBERON:0006238!4.76e-17!69;UBERON:0002619!1.87e-16!22;UBERON:0001017!1.20e-15!82;UBERON:0003075!5.69e-15!86;UBERON:0007284!5.69e-15!86;UBERON:0005743!9.34e-15!86;UBERON:0000956!2.22e-14!25;UBERON:0000203!2.22e-14!25;UBERON:0001950!2.83e-14!20;UBERON:0002346!3.85e-14!90;UBERON:0000153!5.35e-14!129;UBERON:0007811!5.35e-14!129;UBERON:0003056!3.48e-13!61;UBERON:0000073!5.03e-13!94;UBERON:0001016!5.03e-13!94;UBERON:0004177!3.90e-12!7;UBERON:0000369!5.96e-12!4;UBERON:0002435!5.96e-12!4;UBERON:0000204!5.96e-12!4;UBERON:0010082!5.96e-12!4;UBERON:0000033!6.95e-12!123;UBERON:0001872!6.15e-10!5;UBERON:0000349!6.96e-10!5;UBERON:0002420!3.42e-09!9;UBERON:0007245!3.42e-09!9;UBERON:0010009!3.42e-09!9;UBERON:0010011!3.42e-09!9;UBERON:0000454!3.42e-09!9;UBERON:0002308!3.57e-09!9;UBERON:0000125!3.57e-09!9;UBERON:0000200!5.11e-08!6;UBERON:0002106!6.89e-08!3;UBERON:0001896!6.89e-08!3;UBERON:0004854!6.89e-08!3;UBERON:0009034!6.89e-08!3;UBERON:0002095!6.89e-08!3;UBERON:0004782!6.89e-08!3;UBERON:0003281!6.89e-08!3;UBERON:0005290!6.89e-08!3;UBERON:0009664!6.89e-08!3;UBERON:0002296!6.89e-08!3;UBERON:0005602!6.89e-08!3;UBERON:0001179!6.89e-08!3;UBERON:0006293!6.89e-08!3;UBERON:0010096!6.89e-08!3;UBERON:0002771!1.11e-07!3;UBERON:0005383!1.11e-07!3;UBERON:0005382!1.11e-07!3;UBERON:0009663!5.01e-07!7 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.575384784644301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49801404789436,0,2.07207756718018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,8.61739426751628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.121499113316049,0,0,0.314727528809989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0.573409195690071,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781078098613847,0,0.19024743058172,0,0,0,0,0,0,0.336283722218824,0,0,0.0887023701626388,0,0,0,0.0657727735628491,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.644578879735772,0,0,0,0,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129177819672012,0.31037357147929,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:105793325..105793341,- | |||
}} |
Revision as of 11:33, 10 September 2013
Short description: | p@chr10:105793325..105793341, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:105793325..105793341, - |
Coexpression cluster: | C486_acute_Neural_chronic_neuroectodermal_caudate_Astrocyte_myelodysplastic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 1.52e-87 | 3 |
granulocyte | 9.08e-34 | 8 |
blood cell | 6.20e-25 | 11 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.