FFCP PHASE1:Hg19::chr10:86088381..86088436,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=54462 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29197 | |||
|TSSclassifier=S | |||
|UniProt=Q9H7U1 | |||
|association_with_transcript=0bp_to_ENST00000224756,ENST00000372088,NM_018999,uc001kdg.1,uc001kdh.1,uc010qmd.1_5end | |||
|description=CAGE_peak_1_at_FAM190B_5end | |||
|id=chr10:86088381..86088436,+ | |||
|ontology_enrichment_celltype=CL:0002057!5.56e-13!42;CL:0000860!3.95e-11!45;CL:0000766!1.44e-10!76;CL:0000738!3.54e-09!140;CL:0002009!4.97e-09!65;CL:0000557!1.68e-08!71;CL:0002194!2.04e-08!63;CL:0000576!2.04e-08!63;CL:0000040!2.04e-08!63;CL:0000559!2.04e-08!63;CL:0002087!4.33e-07!119;CL:0000791!6.66e-07!18;CL:0000789!6.66e-07!18;CL:0002420!6.66e-07!18;CL:0002419!6.66e-07!18;CL:0000790!6.66e-07!18;CL:0000839!9.17e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.34e-13;33!CL:0002057;9.34e-13;33!CL:0000473;1.14e-09;39!CL:0000234;1.14e-09;39!CL:0000576;4.48e-07;48!CL:0000791;6.22e-07;18!CL:0000789;6.22e-07;18!CL:0002419;6.22e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.56e-13,42;CL:0002057,5.56e-13,42;CL:0000473,6.23e-12,48;CL:0000234,6.23e-12,48;CL:0000766,2.55e-11,72;CL:0002009,8.89e-10,61;CL:0000738,1.45e-09,136;CL:0000557,3.73e-09,67;CL:0002194,3.90e-09,59;CL:0000576,3.90e-09,59;CL:0000040,3.90e-09,59;CL:0000559,3.90e-09,59;CL:0002087,1.92e-07,115;CL:0000839,2.69e-07,66;CL:0000791,6.66e-07,18;CL:0000789,6.66e-07,18;CL:0002420,6.66e-07,18;CL:0002419,6.66e-07,18;CL:0000790,6.66e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002057;5.81e-10;42!CL:0000790;6.22e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002780;8.05e-08;41!UBERON:0001890;8.05e-08;41!UBERON:0003528;1.16e-07;34!UBERON:0002020;1.16e-07;34!UBERON:0001869;1.61e-07;32!UBERON:0002791;2.20e-07;32!UBERON:0000073;3.82e-07;53!UBERON:0002616;3.82e-07;53!UBERON:0001893;4.11e-07;34!UBERON:0002619;5.50e-07;22!UBERON:0000956;6.73e-07;25!UBERON:0000203;6.73e-07;25 | |||
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| |||
|short_description=p1@FAM190B | |||
}} |
Revision as of 14:44, 10 September 2013
Short description: | p1@FAM190B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_FAM190B_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000224756, ENST00000372088, NM_018999, uc001kdg.1, uc001kdh.1, uc010qmd.1_5end |
EntrezGene: | FAM190B |
HGNC: | 29197 |
UniProt: | Q9H7U1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.56e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.56e-13 | 42 |
defensive cell | 6.23e-12 | 48 |
phagocyte | 6.23e-12 | 48 |
myeloid leukocyte | 2.55e-11 | 72 |
macrophage dendritic cell progenitor | 8.89e-10 | 61 |
leukocyte | 1.45e-09 | 136 |
granulocyte monocyte progenitor cell | 3.73e-09 | 67 |
monopoietic cell | 3.90e-09 | 59 |
monocyte | 3.90e-09 | 59 |
monoblast | 3.90e-09 | 59 |
promonocyte | 3.90e-09 | 59 |
nongranular leukocyte | 1.92e-07 | 115 |
myeloid lineage restricted progenitor cell | 2.69e-07 | 66 |
mature alpha-beta T cell | 6.66e-07 | 18 |
alpha-beta T cell | 6.66e-07 | 18 |
immature T cell | 6.66e-07 | 18 |
mature T cell | 6.66e-07 | 18 |
immature alpha-beta T cell | 6.66e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.52e-15 | 114 |
neural tube | 3.83e-13 | 56 |
neural rod | 3.83e-13 | 56 |
future spinal cord | 3.83e-13 | 56 |
neural keel | 3.83e-13 | 56 |
regional part of nervous system | 5.11e-12 | 53 |
regional part of brain | 5.11e-12 | 53 |
central nervous system | 3.49e-11 | 81 |
brain | 3.99e-11 | 68 |
future brain | 3.99e-11 | 68 |
nervous system | 6.72e-11 | 89 |
regional part of forebrain | 1.57e-10 | 41 |
forebrain | 1.57e-10 | 41 |
anterior neural tube | 1.57e-10 | 41 |
future forebrain | 1.57e-10 | 41 |
brain grey matter | 6.64e-09 | 34 |
gray matter | 6.64e-09 | 34 |
telencephalon | 2.06e-08 | 34 |
cerebral hemisphere | 3.66e-08 | 32 |
hematopoietic system | 4.00e-08 | 98 |
blood island | 4.00e-08 | 98 |
regional part of telencephalon | 4.66e-08 | 32 |
neural plate | 8.48e-08 | 82 |
presumptive neural plate | 8.48e-08 | 82 |
regional part of cerebral cortex | 5.10e-07 | 22 |
cerebral cortex | 5.98e-07 | 25 |
pallium | 5.98e-07 | 25 |
hemolymphoid system | 8.65e-07 | 108 |
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