FFCP PHASE1:Hg19::chr10:82264474..82264504,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C235|description=CAGE_peak_at_chr10:82264474..82264504,+|id=chr10:82264474..82264504,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002563;2.37e-29;4!CL:0002253;1.54e-15;2!CL:0000650;2.21e-15;2!CL:1000500;2.21e-15;2!CL:1000618;2.21e-15;2!CL:1001318;2.21e-15;2!CL:0002173;2.21e-15;2!CL:1000507;2.98e-12;10!CL:1000494;2.98e-12;10!CL:0002231;6.73e-11;3!CL:0002541;1.04e-10;3!CL:0002567;1.04e-10;3!CL:0002681;2.24e-10;12!CL:0002584;2.24e-10;12!CL:1000449;1.71e-08;15!CL:0000669;2.35e-08;4!CL:1000497;1.33e-07;17!CL:0002518;1.33e-07;17!CL:0002076;3.44e-07;42|ontology_enrichment_celltype_v019_2=CL:0002563,2.37e-29,4;CL:0002253,1.54e-15,2;CL:0000650,2.74e-15,2;CL:1000500,2.74e-15,2;CL:1000618,2.74e-15,2;CL:1001318,2.74e-15,2;CL:0002173,2.74e-15,2;CL:1000507,3.15e-12,10;CL:1000494,3.15e-12,10;CL:0002231,6.73e-11,3;CL:0002567,8.99e-11,3;CL:0002541,1.09e-10,3;CL:0002681,2.34e-10,12;CL:0002584,2.34e-10,12;CL:1000449,1.78e-08,15;CL:0000669,2.61e-08,4;CL:1000497,1.38e-07,17;CL:0002518,1.38e-07,17;CL:0002076,8.19e-07,42|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0001242;2.37e-29;4!UBERON:0001262;2.37e-29;4!UBERON:0004786;2.37e-29;4!UBERON:0004808;2.37e-29;4!UBERON:0001277;2.37e-29;4!UBERON:0000485;2.90e-17;7!UBERON:0003929;2.90e-17;7!UBERON:0003567;2.21e-15;2!UBERON:0003838;2.21e-15;2!UBERON:0003586;2.21e-15;2!UBERON:0005169;2.21e-15;2!UBERON:0002321;2.21e-15;2!UBERON:0005215;2.21e-15;2!UBERON:0002303;2.21e-15;2!UBERON:0002319;2.21e-15;2!UBERON:0003350;3.06e-15;8!UBERON:0004211;2.98e-12;10!UBERON:0009773;2.98e-12;10!UBERON:0001231;2.98e-12;10!UBERON:0004810;2.98e-12;10!UBERON:0003124;1.04e-10;3!UBERON:0000920;1.04e-10;3!UBERON:0001225;2.24e-10;12!UBERON:0008987;2.24e-10;12!UBERON:0001851;1.71e-08;15!UBERON:0006555;1.71e-08;15!UBERON:0000353;1.71e-08;15!UBERON:0004819;1.71e-08;15!UBERON:0001285;1.71e-08;15!UBERON:0007684;1.71e-08;15!UBERON:0001052;1.96e-08;4!UBERON:0003891;2.35e-08;4!UBERON:0000160;2.60e-07;17!UBERON:0004907;5.38e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0001242,2.37e-29,4;UBERON:0001262,2.37e-29,4;UBERON:0004786,2.37e-29,4;UBERON:0004808,2.37e-29,4;UBERON:0001277,2.37e-29,4;UBERON:0003567,2.74e-15,2;UBERON:0003838,2.74e-15,2;UBERON:0003586,2.74e-15,2;UBERON:0005169,2.74e-15,2;UBERON:0002321,2.74e-15,2;UBERON:0005215,2.74e-15,2;UBERON:0002303,2.74e-15,2;UBERON:0002319,2.74e-15,2;UBERON:0003350,3.06e-15,8;UBERON:0000485,1.15e-13,9;UBERON:0004810,3.15e-12,10;UBERON:0000920,1.09e-10,3;UBERON:0001225,2.34e-10,12;UBERON:0008987,2.34e-10,12;UBERON:0001851,1.78e-08,15;UBERON:0004211,1.78e-08,15;UBERON:0009773,1.78e-08,15;UBERON:0000353,1.78e-08,15;UBERON:0001231,1.78e-08,15;UBERON:0001285,1.78e-08,15;UBERON:0007684,1.78e-08,15;UBERON:0004208,1.78e-08,15;UBERON:0001052,1.96e-08,4;UBERON:0003891,2.61e-08,4;UBERON:0006555,5.27e-08,16;UBERON:0004819,5.27e-08,16;UBERON:0000160,2.60e-07,17;UBERON:0004907,5.38e-07,5;UBERON:0001046,5.50e-07,19|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0.331397375727916,0.672325146451775,0,0,0,0.123121058076788,0,0.313454721478088,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0.447830948479849,0.647787332037959,0,0.145398238779565,0.377875943688809,0,0.232429036905685,0,0,0,0,0.236482229888585,0.344745680736619,0,0,0.188242339542605,0,0,0,0,0,0,0.199463657621632,0.426224750532694,0.290209238628584,0,0.622822248995575,0,0.521482918420201,0.217188844705117,0.605399502633369,0,0,0.211255286311942,0.212604299965044,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0.205601498999509,0,0,0,0,0,0.294605907474837,0,0.270803863765016,0.25618263945135,0,0.164437904603676,0,0,0,0.267540828089713,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.175669571386252,0,0,0,0,0.174129737299267,0,0,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0.367663080345869,0,0.0892997282840798,0.22452937262617,0,0,0.949265659568129,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0.151357427644931,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0.161646056818812,0.355009592516614,0,0.169560592310488,0,0,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.83907508344908,0.171567810298526,0.219500570817251,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0.246217006087397,0,0.148631162288728,0,0.335964256397719,0,0.0895585227028483,0,0,0,0,0,0,0,0,0.381988425558278,0,1.71072446022705,0.308482478109971,0,0,0.224262168690721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C235 | |||
|description=CAGE_peak_at_chr10:82264474..82264504,+ | |||
|id=chr10:82264474..82264504,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002563;2.37e-29;4!CL:0002253;1.54e-15;2!CL:0000650;2.21e-15;2!CL:1000500;2.21e-15;2!CL:1000618;2.21e-15;2!CL:1001318;2.21e-15;2!CL:0002173;2.21e-15;2!CL:1000507;2.98e-12;10!CL:1000494;2.98e-12;10!CL:0002231;6.73e-11;3!CL:0002541;1.04e-10;3!CL:0002567;1.04e-10;3!CL:0002681;2.24e-10;12!CL:0002584;2.24e-10;12!CL:1000449;1.71e-08;15!CL:0000669;2.35e-08;4!CL:1000497;1.33e-07;17!CL:0002518;1.33e-07;17!CL:0002076;3.44e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.37e-29,4;CL:0002253,1.54e-15,2;CL:0000650,2.74e-15,2;CL:1000500,2.74e-15,2;CL:1000618,2.74e-15,2;CL:1001318,2.74e-15,2;CL:0002173,2.74e-15,2;CL:1000507,3.15e-12,10;CL:1000494,3.15e-12,10;CL:0002231,6.73e-11,3;CL:0002567,8.99e-11,3;CL:0002541,1.09e-10,3;CL:0002681,2.34e-10,12;CL:0002584,2.34e-10,12;CL:1000449,1.78e-08,15;CL:0000669,2.61e-08,4;CL:1000497,1.38e-07,17;CL:0002518,1.38e-07,17;CL:0002076,8.19e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001242;2.37e-29;4!UBERON:0001262;2.37e-29;4!UBERON:0004786;2.37e-29;4!UBERON:0004808;2.37e-29;4!UBERON:0001277;2.37e-29;4!UBERON:0000485;2.90e-17;7!UBERON:0003929;2.90e-17;7!UBERON:0003567;2.21e-15;2!UBERON:0003838;2.21e-15;2!UBERON:0003586;2.21e-15;2!UBERON:0005169;2.21e-15;2!UBERON:0002321;2.21e-15;2!UBERON:0005215;2.21e-15;2!UBERON:0002303;2.21e-15;2!UBERON:0002319;2.21e-15;2!UBERON:0003350;3.06e-15;8!UBERON:0004211;2.98e-12;10!UBERON:0009773;2.98e-12;10!UBERON:0001231;2.98e-12;10!UBERON:0004810;2.98e-12;10!UBERON:0003124;1.04e-10;3!UBERON:0000920;1.04e-10;3!UBERON:0001225;2.24e-10;12!UBERON:0008987;2.24e-10;12!UBERON:0001851;1.71e-08;15!UBERON:0006555;1.71e-08;15!UBERON:0000353;1.71e-08;15!UBERON:0004819;1.71e-08;15!UBERON:0001285;1.71e-08;15!UBERON:0007684;1.71e-08;15!UBERON:0001052;1.96e-08;4!UBERON:0003891;2.35e-08;4!UBERON:0000160;2.60e-07;17!UBERON:0004907;5.38e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,2.37e-29,4;UBERON:0001262,2.37e-29,4;UBERON:0004786,2.37e-29,4;UBERON:0004808,2.37e-29,4;UBERON:0001277,2.37e-29,4;UBERON:0003567,2.74e-15,2;UBERON:0003838,2.74e-15,2;UBERON:0003586,2.74e-15,2;UBERON:0005169,2.74e-15,2;UBERON:0002321,2.74e-15,2;UBERON:0005215,2.74e-15,2;UBERON:0002303,2.74e-15,2;UBERON:0002319,2.74e-15,2;UBERON:0003350,3.06e-15,8;UBERON:0000485,1.15e-13,9;UBERON:0004810,3.15e-12,10;UBERON:0000920,1.09e-10,3;UBERON:0001225,2.34e-10,12;UBERON:0008987,2.34e-10,12;UBERON:0001851,1.78e-08,15;UBERON:0004211,1.78e-08,15;UBERON:0009773,1.78e-08,15;UBERON:0000353,1.78e-08,15;UBERON:0001231,1.78e-08,15;UBERON:0001285,1.78e-08,15;UBERON:0007684,1.78e-08,15;UBERON:0004208,1.78e-08,15;UBERON:0001052,1.96e-08,4;UBERON:0003891,2.61e-08,4;UBERON:0006555,5.27e-08,16;UBERON:0004819,5.27e-08,16;UBERON:0000160,2.60e-07,17;UBERON:0004907,5.38e-07,5;UBERON:0001046,5.50e-07,19 | |||
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|short_description=p@chr10:82264474..82264504,+ | |||
}} |
Revision as of 14:40, 10 September 2013
Short description: | p@chr10:82264474..82264504, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:82264474..82264504, + |
Coexpression cluster: | C235_Intestinal_Prostate_liver_colon_small_kidney_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.37e-29 | 4 |
epithelial cell of large intestine | 1.54e-15 | 2 |
mesangial cell | 2.74e-15 | 2 |
kidney interstitial cell | 2.74e-15 | 2 |
juxtaglomerular complex cell | 2.74e-15 | 2 |
renal interstitial pericyte | 2.74e-15 | 2 |
extraglomerular mesangial cell | 2.74e-15 | 2 |
kidney tubule cell | 3.15e-12 | 10 |
nephron tubule epithelial cell | 3.15e-12 | 10 |
epithelial cell of prostate | 6.73e-11 | 3 |
light melanocyte | 8.99e-11 | 3 |
chorionic membrane mesenchymal stem cell | 1.09e-10 | 3 |
kidney cortical cell | 2.34e-10 | 12 |
renal cortical epithelial cell | 2.34e-10 | 12 |
epithelial cell of nephron | 1.78e-08 | 15 |
pericyte cell | 2.61e-08 | 4 |
kidney cell | 1.38e-07 | 17 |
kidney epithelial cell | 1.38e-07 | 17 |
endo-epithelial cell | 8.19e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 2.37e-29 | 4 |
wall of intestine | 2.37e-29 | 4 |
gastrointestinal system mucosa | 2.37e-29 | 4 |
gastrointestinal system epithelium | 2.37e-29 | 4 |
intestinal epithelium | 2.37e-29 | 4 |
abdomen connective tissue | 2.74e-15 | 2 |
abdominal segment connective tissue | 2.74e-15 | 2 |
trunk connective tissue | 2.74e-15 | 2 |
interstitial tissue | 2.74e-15 | 2 |
extraglomerular mesangium | 2.74e-15 | 2 |
kidney interstitium | 2.74e-15 | 2 |
juxtaglomerular apparatus | 2.74e-15 | 2 |
mesangium | 2.74e-15 | 2 |
epithelium of mucosa | 3.06e-15 | 8 |
simple columnar epithelium | 1.15e-13 | 9 |
nephron tubule epithelium | 3.15e-12 | 10 |
egg chorion | 1.09e-10 | 3 |
cortex of kidney | 2.34e-10 | 12 |
renal parenchyma | 2.34e-10 | 12 |
cortex | 1.78e-08 | 15 |
nephron epithelium | 1.78e-08 | 15 |
renal tubule | 1.78e-08 | 15 |
parenchyma | 1.78e-08 | 15 |
nephron tubule | 1.78e-08 | 15 |
nephron | 1.78e-08 | 15 |
uriniferous tubule | 1.78e-08 | 15 |
nephrogenic mesenchyme | 1.78e-08 | 15 |
rectum | 1.96e-08 | 4 |
stroma | 2.61e-08 | 4 |
excretory tube | 5.27e-08 | 16 |
kidney epithelium | 5.27e-08 | 16 |
intestine | 2.60e-07 | 17 |
lower digestive tract | 5.38e-07 | 5 |
hindgut | 5.50e-07 | 19 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.