FFCP PHASE1:Hg19::chr10:72575788..72575797,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8879|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10817|TSSclassifier=S|UniProt=O95470|association_with_transcript=62bp_to_ENST00000373202_5end|description=CAGE_peak_5_at_SGPL1_5end|id=chr10:72575788..72575797,+|ontology_enrichment_celltype=CL:0002009!5.67e-13!65;CL:0002194!6.39e-12!63;CL:0000576!6.39e-12!63;CL:0000040!6.39e-12!63;CL:0000559!6.39e-12!63;CL:0000557!2.82e-10!71;CL:0000839!5.64e-09!70;CL:0000766!1.04e-08!76;CL:0002057!1.53e-08!42;CL:0000860!1.84e-08!45|ontology_enrichment_celltype_v019=CL:0000473;1.01e-24;39!CL:0000234;1.01e-24;39!CL:0000860;1.76e-22;33!CL:0002057;1.76e-22;33!CL:0000576;1.70e-16;48!CL:0000766;1.22e-13;69!CL:0000235;1.64e-07;6!CL:0002619;1.75e-07;3!CL:0000840;1.81e-07;5|ontology_enrichment_celltype_v019_2=CL:0002009,1.82e-38,61;CL:0002194,1.95e-36,59;CL:0000576,1.95e-36,59;CL:0000040,1.95e-36,59;CL:0000559,1.95e-36,59;CL:0000557,1.45e-34,67;CL:0000839,4.72e-32,66;CL:0000473,4.71e-31,48;CL:0000234,4.71e-31,48;CL:0000766,5.78e-29,72;CL:0000860,3.80e-25,42;CL:0002057,3.80e-25,42;CL:0000763,2.04e-19,108;CL:0000049,2.04e-19,108;CL:0002031,6.22e-17,120;CL:0002087,3.32e-16,115;CL:0000738,2.66e-14,136;CL:0002032,3.04e-11,161;CL:0000837,3.04e-11,161;CL:0000988,8.80e-11,177;CL:0000037,1.49e-10,168;CL:0000840,9.87e-08,5;CL:0001029,9.87e-08,5;CL:0000235,1.30e-07,6;CL:0002619,1.62e-07,3|ontology_enrichment_development_v019=CL:0002057;3.09e-16;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!3.56e-10!80;UBERON:0001474!5.64e-09!86;UBERON:0002390!7.23e-08!102;UBERON:0003061!7.23e-08!102;UBERON:0004765!1.81e-07!101;UBERON:0001434!1.81e-07!101;UBERON:0002405!2.30e-07!115|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.05e-32,76;UBERON:0001474,6.51e-30,82;UBERON:0004765,9.23e-27,90;UBERON:0002405,1.02e-25,93;UBERON:0002390,4.04e-24,98;UBERON:0003061,4.04e-24,98;UBERON:0001434,1.59e-23,100;UBERON:0002193,2.30e-21,108;UBERON:0002204,6.14e-20,167;UBERON:0003081,6.28e-14,203;UBERON:0000926,1.53e-10,315;UBERON:0004120,1.53e-10,315;UBERON:0006603,1.53e-10,315|phase1_expression=0.726713517082227,0.214100523890983,0,1.0007329835313,0.446961094427288,0,0,0,0.261185628199839,0.245733936501509,0,0,0,0,0,0,0,0,0,0.738726348460727,0.204000691244253,0.313454721478088,0.286235987131057,0.410623275218653,0.125542639594803,0,0.0821005894499457,0,0.393364276848904,0,0.309632246632152,0,0,0,0.309868802321207,0,0.293600439334847,1.66198622559563,1.00272223735071,0.217010870715852,2.46307021663917,0.32389366601898,3.60605794687861,0.436194716338694,0.755751887377619,0.727752183563449,0.929716147622738,2.05583944010913,1.54853185447552,0,0.256160706529101,0,1.37898272294647,1.93645405075148,1.35426486594342,0.941211697713023,0.818718450173537,2.02251136000576,2.14258724659632,1.28371610830437,1.27867425159808,0.989553900560148,0.997318288108159,0,2.61188314765726,6.24123747160254,5.60540024096017,0.251248665256743,0.521482918420201,0,0,4.78760926783834,4.74693581161327,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68152568894461,0,0,0,0.411202997999018,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.511450247374121,0.361439152384566,1.00267582127178,0,0,0.486634870302636,0.378139268656271,0.221729397462564,0.263504357079378,0.0654895377488563,0,0.741568885568859,2.27183175558278,1.91542711029194,0.930705723632056,0.238490624305342,0,0,0.39752481473341,0,0,0.56530794192401,0,0.275118041940067,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0.12663051166458,0.529636723252875,0,0,0.560677600142307,1.06748995729705,0.24666754841716,0.311211035399766,0,0,0.302714855289863,0,0,0,0,0,0,0.323745888736263,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0.877955241761676,0,0.150238058906597,0,0.179389635688862,0,0,0,0.309157587715317,0,0.18611685633159,0.337552664482532,0.0974370051611986,0.252433774244115,0,0.484938170456436,0,0.201504196455281,0.339121184620975,0.193260853163297,0.272746120590835,0,0.121973706129595,0.265059536642971,0.232387885739037,0.207322110030741,0,0.36497735907583,0,0,0,0,0,0,0,0,0.220587945464788,0,0.237270619111097,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0.737930631258681,0.171567810298526,0.329250856225877,1.1240175325762,0.201057944823262,0.0925884451585296,0,0,0,0.115930404975077,1.05667824812239,0,0,0,0.790204397959275,0,1.72351904261178,0.234004265139238,0.743155811443641,0,0.503946384596579,0.283550194484773,0.268675568108545,0.871901815541886,0,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0.300343057843917,0.285826432630578,0.336393253036082,1.30788020649984,0.36669142910475,0.517086863031111,0,0,0.26593811658487,0,0,0,0.266422179016099,0,0,0,0.325736184293735,0,0,0,0.871533458600294,0.299918973546171,1.2162378064119,3.51579964002488,0,0,1.14861935834114,1.42636905040718,0,0,0,0.336255431980582,0.394061520403854,0.21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432626562123789,0.252332849670158,0,0,0.101988829741982,0,0.459474497674225,0.250707539292375,0.151557396436479,0.267964130156178,0,0.103432995861895,0,0,0.129177819672012,0.434523000071005,0.224263725161227,0.0636471582781649,0.202117188958219,0.217716747896961,0,0.336760265072938,0.215166616178029,0,0.162806537221949,0.426909383510862,0,0.0898252021065869,0,0.122241444182866,0,0,0,0.320568492303233|short_description=p5@SGPL1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=8879 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10817 | |||
|TSSclassifier=S | |||
|UniProt=O95470 | |||
|association_with_transcript=62bp_to_ENST00000373202_5end | |||
|description=CAGE_peak_5_at_SGPL1_5end | |||
|id=chr10:72575788..72575797,+ | |||
|ontology_enrichment_celltype=CL:0002009!5.67e-13!65;CL:0002194!6.39e-12!63;CL:0000576!6.39e-12!63;CL:0000040!6.39e-12!63;CL:0000559!6.39e-12!63;CL:0000557!2.82e-10!71;CL:0000839!5.64e-09!70;CL:0000766!1.04e-08!76;CL:0002057!1.53e-08!42;CL:0000860!1.84e-08!45 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.01e-24;39!CL:0000234;1.01e-24;39!CL:0000860;1.76e-22;33!CL:0002057;1.76e-22;33!CL:0000576;1.70e-16;48!CL:0000766;1.22e-13;69!CL:0000235;1.64e-07;6!CL:0002619;1.75e-07;3!CL:0000840;1.81e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,1.82e-38,61;CL:0002194,1.95e-36,59;CL:0000576,1.95e-36,59;CL:0000040,1.95e-36,59;CL:0000559,1.95e-36,59;CL:0000557,1.45e-34,67;CL:0000839,4.72e-32,66;CL:0000473,4.71e-31,48;CL:0000234,4.71e-31,48;CL:0000766,5.78e-29,72;CL:0000860,3.80e-25,42;CL:0002057,3.80e-25,42;CL:0000763,2.04e-19,108;CL:0000049,2.04e-19,108;CL:0002031,6.22e-17,120;CL:0002087,3.32e-16,115;CL:0000738,2.66e-14,136;CL:0002032,3.04e-11,161;CL:0000837,3.04e-11,161;CL:0000988,8.80e-11,177;CL:0000037,1.49e-10,168;CL:0000840,9.87e-08,5;CL:0001029,9.87e-08,5;CL:0000235,1.30e-07,6;CL:0002619,1.62e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;3.09e-16;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.56e-10!80;UBERON:0001474!5.64e-09!86;UBERON:0002390!7.23e-08!102;UBERON:0003061!7.23e-08!102;UBERON:0004765!1.81e-07!101;UBERON:0001434!1.81e-07!101;UBERON:0002405!2.30e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.05e-32,76;UBERON:0001474,6.51e-30,82;UBERON:0004765,9.23e-27,90;UBERON:0002405,1.02e-25,93;UBERON:0002390,4.04e-24,98;UBERON:0003061,4.04e-24,98;UBERON:0001434,1.59e-23,100;UBERON:0002193,2.30e-21,108;UBERON:0002204,6.14e-20,167;UBERON:0003081,6.28e-14,203;UBERON:0000926,1.53e-10,315;UBERON:0004120,1.53e-10,315;UBERON:0006603,1.53e-10,315 | |||
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| |||
|short_description=p5@SGPL1 | |||
}} |
Revision as of 14:12, 10 September 2013
Short description: | p5@SGPL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_SGPL1_5end |
Coexpression cluster: | NA |
Association with transcript: | 62bp_to_ENST00000373202_5end |
EntrezGene: | SGPL1 |
HGNC: | 10817 |
UniProt: | O95470 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 1.82e-38 | 61 |
monopoietic cell | 1.95e-36 | 59 |
monocyte | 1.95e-36 | 59 |
monoblast | 1.95e-36 | 59 |
promonocyte | 1.95e-36 | 59 |
granulocyte monocyte progenitor cell | 1.45e-34 | 67 |
myeloid lineage restricted progenitor cell | 4.72e-32 | 66 |
defensive cell | 4.71e-31 | 48 |
phagocyte | 4.71e-31 | 48 |
myeloid leukocyte | 5.78e-29 | 72 |
classical monocyte | 3.80e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.80e-25 | 42 |
myeloid cell | 2.04e-19 | 108 |
common myeloid progenitor | 2.04e-19 | 108 |
hematopoietic lineage restricted progenitor cell | 6.22e-17 | 120 |
nongranular leukocyte | 3.32e-16 | 115 |
leukocyte | 2.66e-14 | 136 |
hematopoietic oligopotent progenitor cell | 3.04e-11 | 161 |
hematopoietic multipotent progenitor cell | 3.04e-11 | 161 |
hematopoietic cell | 8.80e-11 | 177 |
hematopoietic stem cell | 1.49e-10 | 168 |
immature conventional dendritic cell | 9.87e-08 | 5 |
common dendritic progenitor | 9.87e-08 | 5 |
macrophage | 1.30e-07 | 6 |
adult endothelial progenitor cell | 1.62e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.05e-32 | 76 |
bone element | 6.51e-30 | 82 |
skeletal element | 9.23e-27 | 90 |
immune system | 1.02e-25 | 93 |
hematopoietic system | 4.04e-24 | 98 |
blood island | 4.04e-24 | 98 |
skeletal system | 1.59e-23 | 100 |
hemolymphoid system | 2.30e-21 | 108 |
musculoskeletal system | 6.14e-20 | 167 |
lateral plate mesoderm | 6.28e-14 | 203 |
mesoderm | 1.53e-10 | 315 |
mesoderm-derived structure | 1.53e-10 | 315 |
presumptive mesoderm | 1.53e-10 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.