FFCP PHASE1:Hg19::chr10:35485013..35485034,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1390|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2352|TSSclassifier=S|UniProt=E9PAR2|association_with_transcript=168bp_to_ENST00000344351_5end|coexpression_cluster_id=C23|description=CAGE_peak_15_at_CREM_5end|id=chr10:35485013..35485034,+|ontology_enrichment_celltype=CL:0000738!1.17e-34!140;CL:0002031!2.17e-29!124;CL:0002087!8.11e-28!119;CL:0002057!1.23e-25!42;CL:0000037!1.03e-23!172;CL:0000566!1.03e-23!172;CL:0000860!4.91e-23!45;CL:0002032!8.85e-23!165;CL:0000837!8.85e-23!165;CL:0000766!5.70e-21!76;CL:0000988!6.62e-21!182;CL:0000557!2.45e-19!71;CL:0000839!2.29e-17!70;CL:0002009!5.80e-17!65;CL:0002194!1.72e-15!63;CL:0000576!1.72e-15!63;CL:0000040!1.72e-15!63;CL:0000559!1.72e-15!63;CL:0000763!1.03e-12!112;CL:0000049!1.03e-12!112;CL:0000791!4.76e-11!18;CL:0000789!4.76e-11!18;CL:0002420!4.76e-11!18;CL:0002419!4.76e-11!18;CL:0000790!4.76e-11!18;CL:0000838!1.52e-10!52;CL:0000542!3.58e-10!53;CL:0000051!3.58e-10!53;CL:0000084!8.50e-09!25;CL:0000827!8.50e-09!25;CL:0000624!1.54e-08!6|ontology_enrichment_celltype_v019=CL:0000624;9.39e-23;6!CL:0000791;1.15e-22;18!CL:0000789;1.15e-22;18!CL:0002419;1.15e-22;18!CL:0000860;4.53e-20;33!CL:0002057;4.53e-20;33!CL:0000084;1.19e-15;25!CL:0000473;1.07e-13;39!CL:0000234;1.07e-13;39!CL:0000898;7.68e-13;3!CL:0000226;9.90e-12;3!CL:0000842;9.90e-12;3!CL:0002087;1.58e-11;104!CL:0000623;1.91e-11;3!CL:0000576;1.03e-10;48!CL:0000542;6.54e-10;53!CL:0000815;3.57e-09;2!CL:0000792;3.57e-09;2!CL:0002677;3.57e-09;2!CL:0000771;1.04e-08;2!CL:0000625;7.54e-08;11!CL:0000094;1.48e-07;8!CL:0000738;2.56e-07;136|ontology_enrichment_celltype_v019_2=CL:0000738,4.57e-35,136;CL:0002087,8.91e-32,115;CL:0000037,1.35e-26,168;CL:0002031,3.51e-26,120;CL:0000988,9.21e-25,177;CL:0002032,2.86e-23,161;CL:0000837,2.86e-23,161;CL:0000624,6.14e-23,6;CL:0000791,8.23e-23,18;CL:0000789,8.23e-23,18;CL:0002420,8.23e-23,18;CL:0002419,8.23e-23,18;CL:0000790,8.23e-23,18;CL:0000860,7.04e-18,42;CL:0002057,7.04e-18,42;CL:0000838,3.09e-16,52;CL:0000542,7.48e-16,53;CL:0000051,7.48e-16,53;CL:0000084,9.43e-16,25;CL:0000827,9.43e-16,25;CL:0000473,3.60e-15,48;CL:0000234,3.60e-15,48;CL:0000766,1.02e-14,72;CL:0000898,7.85e-13,3;CL:0002009,1.82e-12,61;CL:0000226,1.13e-11,3;CL:0000842,1.13e-11,3;CL:0000623,1.88e-11,3;CL:0000825,1.88e-11,3;CL:0002194,2.14e-11,59;CL:0000576,2.14e-11,59;CL:0000040,2.14e-11,59;CL:0000559,2.14e-11,59;CL:0000557,5.07e-11,67;CL:0000839,7.87e-10,66;CL:0000763,2.38e-09,108;CL:0000049,2.38e-09,108;CL:0000815,3.64e-09,2;CL:0000792,3.64e-09,2;CL:0002677,3.64e-09,2;CL:0000771,9.52e-09,2;CL:0000625,7.11e-08,11;CL:0000134,9.90e-08,354;CL:0000094,1.14e-07,8;CL:0002320,2.08e-07,361;CL:0000219,7.49e-07,386|ontology_enrichment_development_v019=CL:0000790;1.15e-22;18!CL:0002057;9.39e-12;42!CL:0000051;6.54e-10;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!1.84e-16!80;UBERON:0001474!6.86e-16!86;UBERON:0002390!1.46e-15!102;UBERON:0003061!1.46e-15!102;UBERON:0002193!1.86e-13!112;UBERON:0004765!4.92e-12!101;UBERON:0001434!4.92e-12!101;UBERON:0002405!7.38e-11!115|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.74e-11,98;UBERON:0003061,8.74e-11,98;UBERON:0002193,2.37e-09,108;UBERON:0002371,2.76e-09,76;UBERON:0001474,2.41e-08,82;UBERON:0002405,5.09e-08,93;UBERON:0004765,2.73e-07,90;UBERON:0002384,5.74e-07,371|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,1.91914699048606,0.928896739896456,0,0,0,0,0,0,1.66198622559563,0.200544447470142,0.868043482863407,0,0,0,0,0,0,0.697287110717054,1.23350366406548,1.23882548358041,1.1507695692886,0.768482119587302,4.49316236788312,0.689491361473237,2.5819387343353,4.06279459783025,0.752969358170419,0.545812300115692,1.12361742222542,3.06083892370903,4.49300637906531,3.19668562899521,0.659702600373432,0.598390972864896,1.27867425159808,0.870627715885752,0.56738522469114,0,1.50749199154046,2.08593167368081,4.34377689410233,1.81619850790011,0.368277635987565,0.316462387440884,0.633765858935825,0.425208599930087,0.419317291016752,0.22465726229299,0.450530678524519,0.16072558669708,0,0,0,0,0.546138611262131,0,0,0,1.72425731986345,0.661044872784862,0,2.27685187643779,0,1.91136614062614,1.32171328579026,0.560508562981536,0,3.73748563216283,1.96505381374582,4.31763147898969,0,10.1035902656413,14.203434172042,5.84480185223734,0.334231370655521,12.0788422064683,8.19675409959398,10.5613506868356,1.0247305578054,1.43065282315866,0.822189523018381,0.276350017785848,0.869409257205157,8.89719378972362,5.88589821797369,5.22677619024884,0.113309342697566,8.43085085924227,7.55980380061786,9.86776798876061,1.91139248594458,0,0,0.150575119077773,0,1.24930726552346,0.236777252044017,0.821127996921047,3.02410114837099,2.13952156626806,1.59306844271079,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1390 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2352 | |||
|TSSclassifier=S | |||
|UniProt=E9PAR2 | |||
|association_with_transcript=168bp_to_ENST00000344351_5end | |||
|coexpression_cluster_id=C23 | |||
|description=CAGE_peak_15_at_CREM_5end | |||
|id=chr10:35485013..35485034,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.17e-34!140;CL:0002031!2.17e-29!124;CL:0002087!8.11e-28!119;CL:0002057!1.23e-25!42;CL:0000037!1.03e-23!172;CL:0000566!1.03e-23!172;CL:0000860!4.91e-23!45;CL:0002032!8.85e-23!165;CL:0000837!8.85e-23!165;CL:0000766!5.70e-21!76;CL:0000988!6.62e-21!182;CL:0000557!2.45e-19!71;CL:0000839!2.29e-17!70;CL:0002009!5.80e-17!65;CL:0002194!1.72e-15!63;CL:0000576!1.72e-15!63;CL:0000040!1.72e-15!63;CL:0000559!1.72e-15!63;CL:0000763!1.03e-12!112;CL:0000049!1.03e-12!112;CL:0000791!4.76e-11!18;CL:0000789!4.76e-11!18;CL:0002420!4.76e-11!18;CL:0002419!4.76e-11!18;CL:0000790!4.76e-11!18;CL:0000838!1.52e-10!52;CL:0000542!3.58e-10!53;CL:0000051!3.58e-10!53;CL:0000084!8.50e-09!25;CL:0000827!8.50e-09!25;CL:0000624!1.54e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0000624;9.39e-23;6!CL:0000791;1.15e-22;18!CL:0000789;1.15e-22;18!CL:0002419;1.15e-22;18!CL:0000860;4.53e-20;33!CL:0002057;4.53e-20;33!CL:0000084;1.19e-15;25!CL:0000473;1.07e-13;39!CL:0000234;1.07e-13;39!CL:0000898;7.68e-13;3!CL:0000226;9.90e-12;3!CL:0000842;9.90e-12;3!CL:0002087;1.58e-11;104!CL:0000623;1.91e-11;3!CL:0000576;1.03e-10;48!CL:0000542;6.54e-10;53!CL:0000815;3.57e-09;2!CL:0000792;3.57e-09;2!CL:0002677;3.57e-09;2!CL:0000771;1.04e-08;2!CL:0000625;7.54e-08;11!CL:0000094;1.48e-07;8!CL:0000738;2.56e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.57e-35,136;CL:0002087,8.91e-32,115;CL:0000037,1.35e-26,168;CL:0002031,3.51e-26,120;CL:0000988,9.21e-25,177;CL:0002032,2.86e-23,161;CL:0000837,2.86e-23,161;CL:0000624,6.14e-23,6;CL:0000791,8.23e-23,18;CL:0000789,8.23e-23,18;CL:0002420,8.23e-23,18;CL:0002419,8.23e-23,18;CL:0000790,8.23e-23,18;CL:0000860,7.04e-18,42;CL:0002057,7.04e-18,42;CL:0000838,3.09e-16,52;CL:0000542,7.48e-16,53;CL:0000051,7.48e-16,53;CL:0000084,9.43e-16,25;CL:0000827,9.43e-16,25;CL:0000473,3.60e-15,48;CL:0000234,3.60e-15,48;CL:0000766,1.02e-14,72;CL:0000898,7.85e-13,3;CL:0002009,1.82e-12,61;CL:0000226,1.13e-11,3;CL:0000842,1.13e-11,3;CL:0000623,1.88e-11,3;CL:0000825,1.88e-11,3;CL:0002194,2.14e-11,59;CL:0000576,2.14e-11,59;CL:0000040,2.14e-11,59;CL:0000559,2.14e-11,59;CL:0000557,5.07e-11,67;CL:0000839,7.87e-10,66;CL:0000763,2.38e-09,108;CL:0000049,2.38e-09,108;CL:0000815,3.64e-09,2;CL:0000792,3.64e-09,2;CL:0002677,3.64e-09,2;CL:0000771,9.52e-09,2;CL:0000625,7.11e-08,11;CL:0000134,9.90e-08,354;CL:0000094,1.14e-07,8;CL:0002320,2.08e-07,361;CL:0000219,7.49e-07,386 | |||
|ontology_enrichment_development_v019=CL:0000790;1.15e-22;18!CL:0002057;9.39e-12;42!CL:0000051;6.54e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.84e-16!80;UBERON:0001474!6.86e-16!86;UBERON:0002390!1.46e-15!102;UBERON:0003061!1.46e-15!102;UBERON:0002193!1.86e-13!112;UBERON:0004765!4.92e-12!101;UBERON:0001434!4.92e-12!101;UBERON:0002405!7.38e-11!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.74e-11,98;UBERON:0003061,8.74e-11,98;UBERON:0002193,2.37e-09,108;UBERON:0002371,2.76e-09,76;UBERON:0001474,2.41e-08,82;UBERON:0002405,5.09e-08,93;UBERON:0004765,2.73e-07,90;UBERON:0002384,5.74e-07,371 | |||
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| |||
|short_description=p15@CREM | |||
}} |
Revision as of 13:16, 10 September 2013
Short description: | p15@CREM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_15_at_CREM_5end |
Coexpression cluster: | C23_CD4_CD8_Natural_Peripheral_Basophils_CD19_CD14 |
Association with transcript: | 168bp_to_ENST00000344351_5end |
EntrezGene: | CREM |
HGNC: | 2352 |
UniProt: | E9PAR2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.74e-11 | 98 |
blood island | 8.74e-11 | 98 |
hemolymphoid system | 2.37e-09 | 108 |
bone marrow | 2.76e-09 | 76 |
bone element | 2.41e-08 | 82 |
immune system | 5.09e-08 | 93 |
skeletal element | 2.73e-07 | 90 |
connective tissue | 5.74e-07 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.