FFCP PHASE1:Hg19::chr10:26727246..26727322,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=54518|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17379|TSSclassifier=S|UniProt=Q9NWJ6,Q7Z5R6,Q8IYL7|association_with_transcript=0bp_to_ENST00000490118,NM_019043,uc001isr.2,uc001iss.2,uc009xks.1_5end|coexpression_cluster_id=C2|description=CAGE_peak_1_at_APBB1IP_5end|id=chr10:26727246..26727322,+|ontology_enrichment_celltype=CL:0000037!5.34e-43!172;CL:0000566!5.34e-43!172;CL:0002032!5.21e-40!165;CL:0000837!5.21e-40!165;CL:0000988!2.63e-38!182;CL:0000738!1.03e-37!140;CL:0000763!3.93e-34!112;CL:0000049!3.93e-34!112;CL:0002087!4.61e-33!119;CL:0000766!4.82e-31!76;CL:0002031!2.18e-29!124;CL:0002194!1.39e-28!63;CL:0000576!1.39e-28!63;CL:0000040!1.39e-28!63;CL:0000559!1.39e-28!63;CL:0002009!2.91e-28!65;CL:0000557!1.19e-26!71;CL:0000134!9.24e-26!358;CL:0000839!1.10e-25!70;CL:0002057!3.57e-25!42;CL:0002320!4.38e-24!365;CL:0000860!1.39e-21!45;CL:0000219!1.61e-17!390;CL:0000048!2.58e-11!430;CL:0000723!4.42e-10!436;CL:0000034!4.79e-10!444;CL:0000945!4.05e-07!24;CL:0000826!4.05e-07!24|ontology_enrichment_celltype_v019=CL:0000860;4.04e-20;33!CL:0002057;4.04e-20;33!CL:0000576;1.71e-19;48!CL:0000473;1.10e-18;39!CL:0000234;1.10e-18;39!CL:0000766;1.60e-14;69!CL:0000763;7.04e-13;100!CL:0002087;2.31e-10;104!CL:0000738;2.87e-09;136!CL:0000945;1.69e-07;24!CL:0000988;2.18e-07;177|ontology_enrichment_celltype_v019_2=CL:0000037,6.20e-46,168;CL:0002032,9.61e-43,161;CL:0000837,9.61e-43,161;CL:0000988,1.54e-40,177;CL:0000738,1.01e-39,136;CL:0000763,7.40e-38,108;CL:0000049,7.40e-38,108;CL:0002087,9.05e-37,115;CL:0002194,2.38e-34,59;CL:0000576,2.38e-34,59;CL:0000040,2.38e-34,59;CL:0000559,2.38e-34,59;CL:0000766,2.90e-34,72;CL:0002009,7.09e-34,61;CL:0002031,7.61e-31,120;CL:0000557,1.81e-29,67;CL:0000473,5.99e-29,48;CL:0000234,5.99e-29,48;CL:0000839,2.07e-28,66;CL:0000860,9.93e-27,42;CL:0002057,9.93e-27,42;CL:0000134,1.05e-24,354;CL:0002320,1.29e-22,361;CL:0000219,5.19e-17,386;CL:0000048,1.65e-10,427;CL:0000723,1.76e-09,433;CL:0000034,2.51e-09,441;CL:0000945,1.74e-07,24;CL:0000826,1.74e-07,24|ontology_enrichment_development_v019=CL:0002057;2.28e-19;42!CL:0000049;3.50e-12;108|ontology_enrichment_disease=DOID:2531!8.77e-08!51;DOID:0060083!8.77e-08!51|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:2531,1.62e-08,51;DOID:0060083,1.62e-08,51;DOID:1240,4.57e-07,39|ontology_enrichment_uberon=UBERON:0002390!3.67e-34!102;UBERON:0003061!3.67e-34!102;UBERON:0002193!8.68e-30!112;UBERON:0007023!6.27e-27!115;UBERON:0002371!1.56e-25!80;UBERON:0002384!8.63e-23!375;UBERON:0001474!2.04e-21!86;UBERON:0002405!2.85e-19!115;UBERON:0004765!5.54e-18!101;UBERON:0001434!5.54e-18!101;UBERON:0001049!5.80e-10!57;UBERON:0005068!5.80e-10!57;UBERON:0006241!5.80e-10!57;UBERON:0007135!5.80e-10!57;UBERON:0003080!1.69e-08!42;UBERON:0002780!3.11e-08!41;UBERON:0001890!3.11e-08!41;UBERON:0006240!3.11e-08!41;UBERON:0000178!4.09e-07!15;UBERON:0000179!4.09e-07!15;UBERON:0000463!4.09e-07!15;UBERON:0001893!6.17e-07!34;UBERON:0002020!8.21e-07!34;UBERON:0003528!8.21e-07!34;UBERON:0002616!9.84e-07!59|ontology_enrichment_uberon_v019=UBERON:0002390;3.34e-08;32!UBERON:0007023;1.25e-07;114!UBERON:0002780;6.17e-07;41!UBERON:0001890;6.17e-07;41|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.00e-36,98;UBERON:0003061,1.00e-36,98;UBERON:0002193,5.32e-32,108;UBERON:0002371,2.27e-28,76;UBERON:0007023,1.83e-27,114;UBERON:0002405,3.32e-26,93;UBERON:0001474,9.99e-24,82;UBERON:0002384,2.18e-21,371;UBERON:0004765,1.11e-18,90;UBERON:0001434,2.14e-18,100;UBERON:0001049,1.19e-10,56;UBERON:0005068,1.19e-10,56;UBERON:0006241,1.19e-10,56;UBERON:0007135,1.19e-10,56;UBERON:0000073,1.41e-09,53;UBERON:0002616,1.41e-09,53;UBERON:0002780,6.85e-09,41;UBERON:0001890,6.85e-09,41;UBERON:0003080,6.85e-09,41;UBERON:0006240,6.85e-09,41;UBERON:0000479,3.72e-08,773;UBERON:0001893,1.66e-07,34;UBERON:0003528,2.26e-07,34;UBERON:0002020,2.26e-07,34;UBERON:0002791,8.81e-07,32|phase1_expression=15.6243406172679,88.2094158430851,25.0898839290829,12.0087958023756,27.2646267600646,0.872338524100369,27.8629865985142,27.1639545573537,89.8478561007445,0,0,1.52908960491121,0.527533956456907,0,0.331397375727916,1.34465029290355,0,0,0,0,0,0,0,0,0,3.97349709889347,3.20192298854788,4.32909297225236,50.7439917135086,23.0297638858328,33.4402826362724,0,0,0,72.1994309408411,26.8699849401227,50.4992755655937,36.009701554572,33.2903782800435,26.6923370980498,87.5509504278104,44.0495385785812,108.181738406358,113.55602448684,152.28400530659,163.986825362964,82.512308101518,100.736132565347,82.6916010289927,118.816958029048,119.62704994909,124.389652921396,53.7803261949125,45.8294125344517,56.8791243696235,97.6977742226118,122.261955225915,109.215613440311,66.7262885368568,102.69728866435,114.441345518028,90.0494049509735,95.1441646855184,103.998839129977,38.8880379762303,36.8800396049241,49.825779919646,134.418035912358,108.468447031402,110.114744265494,34.507771650102,58.1878664860352,51.5833691528642,63.5878411798945,66.9703544889887,58.494762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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=54518 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17379 | |||
|TSSclassifier=S | |||
|UniProt=Q9NWJ6,Q7Z5R6,Q8IYL7 | |||
|association_with_transcript=0bp_to_ENST00000490118,NM_019043,uc001isr.2,uc001iss.2,uc009xks.1_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_1_at_APBB1IP_5end | |||
|id=chr10:26727246..26727322,+ | |||
|ontology_enrichment_celltype=CL:0000037!5.34e-43!172;CL:0000566!5.34e-43!172;CL:0002032!5.21e-40!165;CL:0000837!5.21e-40!165;CL:0000988!2.63e-38!182;CL:0000738!1.03e-37!140;CL:0000763!3.93e-34!112;CL:0000049!3.93e-34!112;CL:0002087!4.61e-33!119;CL:0000766!4.82e-31!76;CL:0002031!2.18e-29!124;CL:0002194!1.39e-28!63;CL:0000576!1.39e-28!63;CL:0000040!1.39e-28!63;CL:0000559!1.39e-28!63;CL:0002009!2.91e-28!65;CL:0000557!1.19e-26!71;CL:0000134!9.24e-26!358;CL:0000839!1.10e-25!70;CL:0002057!3.57e-25!42;CL:0002320!4.38e-24!365;CL:0000860!1.39e-21!45;CL:0000219!1.61e-17!390;CL:0000048!2.58e-11!430;CL:0000723!4.42e-10!436;CL:0000034!4.79e-10!444;CL:0000945!4.05e-07!24;CL:0000826!4.05e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.04e-20;33!CL:0002057;4.04e-20;33!CL:0000576;1.71e-19;48!CL:0000473;1.10e-18;39!CL:0000234;1.10e-18;39!CL:0000766;1.60e-14;69!CL:0000763;7.04e-13;100!CL:0002087;2.31e-10;104!CL:0000738;2.87e-09;136!CL:0000945;1.69e-07;24!CL:0000988;2.18e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,6.20e-46,168;CL:0002032,9.61e-43,161;CL:0000837,9.61e-43,161;CL:0000988,1.54e-40,177;CL:0000738,1.01e-39,136;CL:0000763,7.40e-38,108;CL:0000049,7.40e-38,108;CL:0002087,9.05e-37,115;CL:0002194,2.38e-34,59;CL:0000576,2.38e-34,59;CL:0000040,2.38e-34,59;CL:0000559,2.38e-34,59;CL:0000766,2.90e-34,72;CL:0002009,7.09e-34,61;CL:0002031,7.61e-31,120;CL:0000557,1.81e-29,67;CL:0000473,5.99e-29,48;CL:0000234,5.99e-29,48;CL:0000839,2.07e-28,66;CL:0000860,9.93e-27,42;CL:0002057,9.93e-27,42;CL:0000134,1.05e-24,354;CL:0002320,1.29e-22,361;CL:0000219,5.19e-17,386;CL:0000048,1.65e-10,427;CL:0000723,1.76e-09,433;CL:0000034,2.51e-09,441;CL:0000945,1.74e-07,24;CL:0000826,1.74e-07,24 | |||
|ontology_enrichment_development_v019=CL:0002057;2.28e-19;42!CL:0000049;3.50e-12;108 | |||
|ontology_enrichment_disease=DOID:2531!8.77e-08!51;DOID:0060083!8.77e-08!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.62e-08,51;DOID:0060083,1.62e-08,51;DOID:1240,4.57e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.67e-34!102;UBERON:0003061!3.67e-34!102;UBERON:0002193!8.68e-30!112;UBERON:0007023!6.27e-27!115;UBERON:0002371!1.56e-25!80;UBERON:0002384!8.63e-23!375;UBERON:0001474!2.04e-21!86;UBERON:0002405!2.85e-19!115;UBERON:0004765!5.54e-18!101;UBERON:0001434!5.54e-18!101;UBERON:0001049!5.80e-10!57;UBERON:0005068!5.80e-10!57;UBERON:0006241!5.80e-10!57;UBERON:0007135!5.80e-10!57;UBERON:0003080!1.69e-08!42;UBERON:0002780!3.11e-08!41;UBERON:0001890!3.11e-08!41;UBERON:0006240!3.11e-08!41;UBERON:0000178!4.09e-07!15;UBERON:0000179!4.09e-07!15;UBERON:0000463!4.09e-07!15;UBERON:0001893!6.17e-07!34;UBERON:0002020!8.21e-07!34;UBERON:0003528!8.21e-07!34;UBERON:0002616!9.84e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0002390;3.34e-08;32!UBERON:0007023;1.25e-07;114!UBERON:0002780;6.17e-07;41!UBERON:0001890;6.17e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.00e-36,98;UBERON:0003061,1.00e-36,98;UBERON:0002193,5.32e-32,108;UBERON:0002371,2.27e-28,76;UBERON:0007023,1.83e-27,114;UBERON:0002405,3.32e-26,93;UBERON:0001474,9.99e-24,82;UBERON:0002384,2.18e-21,371;UBERON:0004765,1.11e-18,90;UBERON:0001434,2.14e-18,100;UBERON:0001049,1.19e-10,56;UBERON:0005068,1.19e-10,56;UBERON:0006241,1.19e-10,56;UBERON:0007135,1.19e-10,56;UBERON:0000073,1.41e-09,53;UBERON:0002616,1.41e-09,53;UBERON:0002780,6.85e-09,41;UBERON:0001890,6.85e-09,41;UBERON:0003080,6.85e-09,41;UBERON:0006240,6.85e-09,41;UBERON:0000479,3.72e-08,773;UBERON:0001893,1.66e-07,34;UBERON:0003528,2.26e-07,34;UBERON:0002020,2.26e-07,34;UBERON:0002791,8.81e-07,32 | |||
|phase1_expression=15.6243406172679,88.2094158430851,25.0898839290829,12.0087958023756,27.2646267600646,0.872338524100369,27.8629865985142,27.1639545573537,89.8478561007445,0,0,1.52908960491121,0.527533956456907,0,0.331397375727916,1.34465029290355,0,0,0,0,0,0,0,0,0,3.97349709889347,3.20192298854788,4.32909297225236,50.7439917135086,23.0297638858328,33.4402826362724,0,0,0,72.1994309408411,26.8699849401227,50.4992755655937,36.009701554572,33.2903782800435,26.6923370980498,87.5509504278104,44.0495385785812,108.181738406358,113.55602448684,152.28400530659,163.986825362964,82.512308101518,100.736132565347,82.6916010289927,118.816958029048,119.62704994909,124.389652921396,53.7803261949125,45.8294125344517,56.8791243696235,97.6977742226118,122.261955225915,109.215613440311,66.7262885368568,102.69728866435,114.441345518028,90.0494049509735,95.1441646855184,103.998839129977,38.8880379762303,36.8800396049241,49.825779919646,134.418035912358,108.468447031402,110.114744265494,34.507771650102,58.1878664860352,51.5833691528642,63.5878411798945,66.9703544889887,58.4947620968369,74.4738824501263,71.6343778853985,109.775575714106,68.4030584978997,77.378587430446,60.4618348960938,14.0796995569058,26.2146533405823,22.2377313465889,26.0305435765569,26.0257391573408,29.8871268776331,21.1534359291156,33.3918814087377,9.10740750575117,9.39579502993502,16.8200220375101,33.0428321447565,15.694239763483,46.6189830051886,2.16380747125216,1.57204305099666,3.70082698199117,3.17654341242288,4.56291173287027,1.4203434172042,3.89653456815823,8.35578426638802,3.53527088969805,2.65840673500345,6.49929273036037,6.40456598628376,6.50296737799391,4.60426132890293,4.97430032014527,4.92665245749589,2.66915813691709,1.60524496853828,3.1360657141493,8.0449633315272,1.91610246800961,4.46715679127419,4.30133476433155,5.09704662918555,3.25541726928209,3.8018081777935,7.82990619204418,6.39933055772092,21.2382235138988,14.9169668787731,4.10563998460523,1.81446068902259,0.534880391567015,2.02754165435919,12.1903433156981,0,0.12786256184353,2.53007406669196,1.00267582127178,2.60723734129483,3.9764297352555,8.75942766544745,0.0945348171640679,0,0.087834785693126,8.31717129410475,0,0,24.0165071304466,32.9105203495615,49.7262772340556,27.187931170809,33.7476997360275,23.7732800850922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,134.416025784785,302.468606035694,0,7.9515512271251,0.12663051166458,5.03154887090231,1.72101972449288,1.77334191099179,0.560677600142307,0,0,0.311211035399766,0,0,0,0,0.70296429550139,3.1216007683032,1.1409436430889,0.747243402759005,0,0,0.421352420106746,1.02077085627447,0.368502951935304,2.16984140469107,24.9480600029231,18.2977527666132,2.73048408581408,0.718618141816238,0,0,1.38532057742091,2.63386572528503,4.90380473278431,13.0707111248739,0,1.07633781413317,5.12537733164562,5.93409323246773,1.20036438433761,3.29768093563004,3.86460810068444,4.09457083929498,1.0126579934476,1.55899208257918,4.03894038790583,5.52299391853796,8.08230284094059,1.77504796258307,1.71278566986988,1.3564847384839,0,0,0,0,0,0,0.10366105501537,0.252320850875628,0,31.2899064659632,15.4377825166292,12.4321429217232,3.25057549622385,2.16563844500876,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,32.956309053676,51.1070152672366,57.3066209480962,12.8024298830249,0,0,0,0,0,0,0,0,1.44331342025273,0.463721619900307,0,0,0,0,0,0,46.7812311566055,8.89216207529103,27.0508715365485,0,0,0,0,0,0,0.492663237895943,0.528290604079356,0.414656231081544,0.432359860250884,0.12624243342638,0.063497894292169,0,0,11.9750712215894,0.102827492703324,0,0,0,0,0,0,50.0719024192635,3.381211010224,0.531876233169741,0,1.02882949704857,0,0,0,0,0,3.25736184293735,0,0,0.301439377059586,0.871533458600294,0.199945982364114,25.54099393465,46.2076524117556,31.6250909224547,0,0,0,1.30303176000821,0,0,9.52723723944982,4.13764596424047,0.646882724578552,2.82354679815446,0,0,0,1.34013012267479,0,346.790252087545,415.834428293595,973.047625547811,0,0.500170521059677,0,0.623912584592421,0.892144943985809,2.05013139544115,0,3.61135319673263,0,2.0694614258501,0,0.921845842708516,4.77859879574456,0.195801157462741,0,27.7069155004669,30.8471307170622,24.013700505775,0.303127571446259,0,0.604780586659361,19.1043012020458,26.8558453254109,14.3136648160868,26.3966647466744,16.3746319701345,7.72098821489316,7.42090332224955,2.46735510084249,2.13074070375753,3.53146770859379,1.03850885836724,3.25389059687886,0,0,0,0,0,0.262248829918848,0.451199612907412,0,0,0,0,0,0,0.863663664408557,1.54227252690289,0.270946437543853,0,2.80363900349542,0.831076008928724,1.11937377361089,1.75407901316748,1.3071772551245,0,0,0,20.6082023295445,0,0,0,0,0,0,1.23238893691716,2.91656981979646,0.689182862422653,5.15617175367713,2.17525040871343,0.767039646744908,0,0,0,0.127612712494584,0,0,0,0,0,2.12922412126809,0,0,0,0,0,0,0,0,0.636406495851874,0,0,0,0,0.404364963146632,0,0.421258456238981,0,0,0,0,0.282810863907425,0,0,0,0,1.15755106853338,0,0,1.8589409885985,0,0,0.0982490410131212,0,0.354761064070598,25.755131506315,96.1541087442913,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| |||
|short_description=p1@APBB1IP | |||
}} |
Revision as of 12:58, 10 September 2013
Short description: | p1@APBB1IP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_APBB1IP_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000490118, NM_019043, uc001isr.2, uc001iss.2, uc009xks.1_5end |
EntrezGene: | APBB1IP |
HGNC: | 17379 |
UniProt: | Q9NWJ6Q7Z5R6Q8IYL7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 6.20e-46 | 168 |
hematopoietic oligopotent progenitor cell | 9.61e-43 | 161 |
hematopoietic multipotent progenitor cell | 9.61e-43 | 161 |
hematopoietic cell | 1.54e-40 | 177 |
leukocyte | 1.01e-39 | 136 |
myeloid cell | 7.40e-38 | 108 |
common myeloid progenitor | 7.40e-38 | 108 |
nongranular leukocyte | 9.05e-37 | 115 |
monopoietic cell | 2.38e-34 | 59 |
monocyte | 2.38e-34 | 59 |
monoblast | 2.38e-34 | 59 |
promonocyte | 2.38e-34 | 59 |
myeloid leukocyte | 2.90e-34 | 72 |
macrophage dendritic cell progenitor | 7.09e-34 | 61 |
hematopoietic lineage restricted progenitor cell | 7.61e-31 | 120 |
granulocyte monocyte progenitor cell | 1.81e-29 | 67 |
defensive cell | 5.99e-29 | 48 |
phagocyte | 5.99e-29 | 48 |
myeloid lineage restricted progenitor cell | 2.07e-28 | 66 |
classical monocyte | 9.93e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.93e-27 | 42 |
mesenchymal cell | 1.05e-24 | 354 |
connective tissue cell | 1.29e-22 | 361 |
motile cell | 5.19e-17 | 386 |
multi fate stem cell | 1.65e-10 | 427 |
somatic stem cell | 1.76e-09 | 433 |
stem cell | 2.51e-09 | 441 |
lymphocyte of B lineage | 1.74e-07 | 24 |
pro-B cell | 1.74e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.00e-36 | 98 |
blood island | 1.00e-36 | 98 |
hemolymphoid system | 5.32e-32 | 108 |
bone marrow | 2.27e-28 | 76 |
adult organism | 1.83e-27 | 114 |
immune system | 3.32e-26 | 93 |
bone element | 9.99e-24 | 82 |
connective tissue | 2.18e-21 | 371 |
skeletal element | 1.11e-18 | 90 |
skeletal system | 2.14e-18 | 100 |
neural tube | 1.19e-10 | 56 |
neural rod | 1.19e-10 | 56 |
future spinal cord | 1.19e-10 | 56 |
neural keel | 1.19e-10 | 56 |
regional part of nervous system | 1.41e-09 | 53 |
regional part of brain | 1.41e-09 | 53 |
regional part of forebrain | 6.85e-09 | 41 |
forebrain | 6.85e-09 | 41 |
anterior neural tube | 6.85e-09 | 41 |
future forebrain | 6.85e-09 | 41 |
tissue | 3.72e-08 | 773 |
telencephalon | 1.66e-07 | 34 |
brain grey matter | 2.26e-07 | 34 |
gray matter | 2.26e-07 | 34 |
regional part of telencephalon | 8.81e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.62e-08 | 51 |
immune system cancer | 1.62e-08 | 51 |
leukemia | 4.57e-07 | 39 |
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