FFCP PHASE1:Hg19::chr10:22967066..22967069,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:22967066..22967069,-|id=chr10:22967066..22967069,-|ontology_enrichment_celltype=CL:0000542!2.65e-07!53;CL:0000051!2.65e-07!53|ontology_enrichment_celltype_v019=CL:0000625;2.47e-07;11|ontology_enrichment_celltype_v019_2=CL:0000625,2.63e-07,11|ontology_enrichment_development_v019=UBERON:0005425;2.39e-66;1!UBERON:0003056;3.27e-23;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!6.02e-14!57;UBERON:0005068!6.02e-14!57;UBERON:0006241!6.02e-14!57;UBERON:0007135!6.02e-14!57;UBERON:0002346!1.68e-12!90;UBERON:0003075!1.89e-11!86;UBERON:0007284!1.89e-11!86;UBERON:0000073!1.83e-10!94;UBERON:0001016!1.83e-10!94;UBERON:0002616!1.38e-09!59;UBERON:0005743!1.69e-09!86;UBERON:0001017!2.54e-09!82;UBERON:0002780!3.47e-09!41;UBERON:0001890!3.47e-09!41;UBERON:0006240!3.47e-09!41;UBERON:0000955!4.44e-09!69;UBERON:0006238!4.44e-09!69;UBERON:0002020!6.96e-09!34;UBERON:0003528!6.96e-09!34;UBERON:0003080!7.17e-09!42;UBERON:0001893!8.90e-09!34;UBERON:0007023!3.21e-08!115;UBERON:0002298!5.20e-08!8;UBERON:0002791!5.51e-08!33;UBERON:0002308!6.85e-08!9;UBERON:0000125!6.85e-08!9;UBERON:0003056!2.93e-07!61;UBERON:0006331!7.83e-07!3;UBERON:0003076!8.97e-07!15;UBERON:0003057!8.97e-07!15;UBERON:0002240!9.15e-07!3;UBERON:0001869!9.17e-07!32|ontology_enrichment_uberon_v019=UBERON:0002038;2.39e-66;1!UBERON:0000941;2.39e-66;1!UBERON:0001785;2.39e-66;1!UBERON:0002464;2.39e-66;1!UBERON:0004904;2.39e-66;1!UBERON:0001021;2.39e-66;1!UBERON:0009661;2.39e-66;1!UBERON:0002950;2.39e-66;1!UBERON:0001891;2.39e-66;1!UBERON:0003714;5.04e-34;2!UBERON:0005162;5.04e-34;2!UBERON:0000122;5.04e-34;2!UBERON:0009663;8.99e-11;7!UBERON:0002420;1.12e-08;9!UBERON:0000125;1.12e-08;9!UBERON:0007245;1.12e-08;9!UBERON:0002308;1.12e-08;9!UBERON:0010009;1.12e-08;9!UBERON:0000010;1.12e-08;8!UBERON:0010011;1.12e-08;9!UBERON:0000454;1.12e-08;9|ontology_enrichment_uberon_v019_2=UBERON:0002038,1.23e-66,1;UBERON:0009661,1.23e-66,1;UBERON:0002950,1.23e-66,1;UBERON:0001891,1.23e-66,1;UBERON:0009616,1.23e-66,1;UBERON:0010286,1.23e-66,1;UBERON:0000941,2.39e-66,1;UBERON:0001785,2.39e-66,1;UBERON:0002464,2.39e-66,1;UBERON:0004904,2.39e-66,1;UBERON:0001021,2.39e-66,1;UBERON:0003902,2.39e-66,1;UBERON:0005425,2.39e-66,1;UBERON:0003714,5.04e-34,2;UBERON:0005162,5.04e-34,2;UBERON:0000122,5.04e-34,2;UBERON:0001781,8.69e-18,4;UBERON:0000966,2.45e-12,6;UBERON:0005388,2.45e-12,6;UBERON:0001802,2.45e-12,6;UBERON:0009663,8.16e-11,7;UBERON:0002420,1.04e-08,9;UBERON:0000125,1.04e-08,9;UBERON:0007245,1.04e-08,9;UBERON:0002308,1.04e-08,9;UBERON:0010009,1.04e-08,9;UBERON:0010011,1.04e-08,9;UBERON:0000454,1.04e-08,9;UBERON:0000010,1.12e-08,8|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.164201178899891,0,0,0.383829398097213,0,0,0,0,0.0774672005803016,0.284338464974843,0,0.553995408531877,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.75374599577023,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0.570025487482497,0,0,0,0,0,0.426730222566507,0,0,0,0,0.569212969109448,0.587237189370939,0.382273228125229,0,0,0,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0.128091319725675,0,0.328875809207352,0.276350017785848,0,0,0,0,0,0.383220493601921,0,0,0.318565414324097,0,0,0,0,1.24930726552346,0,0,0.403213486449465,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0.324547393654683,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0.197030760201927,0.215627574859517,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0.107420244868274,0.145016693914229,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0.185803175125719,0,0.0711418433484141,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0.222617410045812,0,0,0.19924798825107,0,0.251932747854276,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0.269604531922708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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:22967066..22967069,- | |||
|id=chr10:22967066..22967069,- | |||
|ontology_enrichment_celltype=CL:0000542!2.65e-07!53;CL:0000051!2.65e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000625;2.47e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,2.63e-07,11 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.39e-66;1!UBERON:0003056;3.27e-23;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.02e-14!57;UBERON:0005068!6.02e-14!57;UBERON:0006241!6.02e-14!57;UBERON:0007135!6.02e-14!57;UBERON:0002346!1.68e-12!90;UBERON:0003075!1.89e-11!86;UBERON:0007284!1.89e-11!86;UBERON:0000073!1.83e-10!94;UBERON:0001016!1.83e-10!94;UBERON:0002616!1.38e-09!59;UBERON:0005743!1.69e-09!86;UBERON:0001017!2.54e-09!82;UBERON:0002780!3.47e-09!41;UBERON:0001890!3.47e-09!41;UBERON:0006240!3.47e-09!41;UBERON:0000955!4.44e-09!69;UBERON:0006238!4.44e-09!69;UBERON:0002020!6.96e-09!34;UBERON:0003528!6.96e-09!34;UBERON:0003080!7.17e-09!42;UBERON:0001893!8.90e-09!34;UBERON:0007023!3.21e-08!115;UBERON:0002298!5.20e-08!8;UBERON:0002791!5.51e-08!33;UBERON:0002308!6.85e-08!9;UBERON:0000125!6.85e-08!9;UBERON:0003056!2.93e-07!61;UBERON:0006331!7.83e-07!3;UBERON:0003076!8.97e-07!15;UBERON:0003057!8.97e-07!15;UBERON:0002240!9.15e-07!3;UBERON:0001869!9.17e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0002038;2.39e-66;1!UBERON:0000941;2.39e-66;1!UBERON:0001785;2.39e-66;1!UBERON:0002464;2.39e-66;1!UBERON:0004904;2.39e-66;1!UBERON:0001021;2.39e-66;1!UBERON:0009661;2.39e-66;1!UBERON:0002950;2.39e-66;1!UBERON:0001891;2.39e-66;1!UBERON:0003714;5.04e-34;2!UBERON:0005162;5.04e-34;2!UBERON:0000122;5.04e-34;2!UBERON:0009663;8.99e-11;7!UBERON:0002420;1.12e-08;9!UBERON:0000125;1.12e-08;9!UBERON:0007245;1.12e-08;9!UBERON:0002308;1.12e-08;9!UBERON:0010009;1.12e-08;9!UBERON:0000010;1.12e-08;8!UBERON:0010011;1.12e-08;9!UBERON:0000454;1.12e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002038,1.23e-66,1;UBERON:0009661,1.23e-66,1;UBERON:0002950,1.23e-66,1;UBERON:0001891,1.23e-66,1;UBERON:0009616,1.23e-66,1;UBERON:0010286,1.23e-66,1;UBERON:0000941,2.39e-66,1;UBERON:0001785,2.39e-66,1;UBERON:0002464,2.39e-66,1;UBERON:0004904,2.39e-66,1;UBERON:0001021,2.39e-66,1;UBERON:0003902,2.39e-66,1;UBERON:0005425,2.39e-66,1;UBERON:0003714,5.04e-34,2;UBERON:0005162,5.04e-34,2;UBERON:0000122,5.04e-34,2;UBERON:0001781,8.69e-18,4;UBERON:0000966,2.45e-12,6;UBERON:0005388,2.45e-12,6;UBERON:0001802,2.45e-12,6;UBERON:0009663,8.16e-11,7;UBERON:0002420,1.04e-08,9;UBERON:0000125,1.04e-08,9;UBERON:0007245,1.04e-08,9;UBERON:0002308,1.04e-08,9;UBERON:0010009,1.04e-08,9;UBERON:0010011,1.04e-08,9;UBERON:0000454,1.04e-08,9;UBERON:0000010,1.12e-08,8 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.164201178899891,0,0,0.383829398097213,0,0,0,0,0.0774672005803016,0.284338464974843,0,0.553995408531877,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.75374599577023,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0.570025487482497,0,0,0,0,0,0.426730222566507,0,0,0,0,0.569212969109448,0.587237189370939,0.382273228125229,0,0,0,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0.128091319725675,0,0.328875809207352,0.276350017785848,0,0,0,0,0,0.383220493601921,0,0,0.318565414324097,0,0,0,0,1.24930726552346,0,0,0.403213486449465,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0.324547393654683,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0.197030760201927,0.215627574859517,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0.107420244868274,0.145016693914229,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0.185803175125719,0,0.0711418433484141,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0.222617410045812,0,0,0.19924798825107,0,0.251932747854276,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0.269604531922708,0,0.468528891450678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.410716136675979,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,0,0.795229689809303,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.39669780522807,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0.886068179966986,0,0,0,0.221858103073705,0.0620964029413835,0.415045904808692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0.38582807654183,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0.172214979660816,0,0,0,0,0,0,0.157265941855896,0,0,0.212574920101683,0.123935764259002,0,0,0.0788617450012534,0,0,0,0,0,0.638535436228605,0,0,0,0.161475645631851,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0.131545547125698,0,0.111231401892069,0,0,0,0,0.215927591218621,0.47775168788705,0,0.158013611732727,0.116241425368125,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0.196308467114945,0.297046400327086,0.4226557275834,0,0.0939839179798536,0.0644578879735772,0.0999411559249289,0,0,0.0802413666891683,0,0,1.86341458096887,0,0.0679914901909147,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0,0,0,0.620597975171371,0,0,0,0.0620747142958579,0,0,0.202117188958219,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:22967066..22967069,- | |||
}} |
Revision as of 12:52, 10 September 2013
Short description: | p@chr10:22967066..22967069, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:22967066..22967069, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 2.63e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
substantia nigra | 1.23e-66 | 1 |
midbrain nucleus | 1.23e-66 | 1 |
regional part of midbrain | 1.23e-66 | 1 |
midbrain | 1.23e-66 | 1 |
presumptive midbrain | 1.23e-66 | 1 |
midbrain neural tube | 1.23e-66 | 1 |
cranial nerve II | 2.39e-66 | 1 |
cranial nerve | 2.39e-66 | 1 |
nerve trunk | 2.39e-66 | 1 |
nerve connecting eye with brain | 2.39e-66 | 1 |
nerve | 2.39e-66 | 1 |
retinal neural layer | 2.39e-66 | 1 |
presumptive neural retina | 2.39e-66 | 1 |
neural tissue | 5.04e-34 | 2 |
multi cell component structure | 5.04e-34 | 2 |
neuron projection bundle | 5.04e-34 | 2 |
layer of retina | 8.69e-18 | 4 |
retina | 2.45e-12 | 6 |
photoreceptor array | 2.45e-12 | 6 |
posterior segment of eyeball | 2.45e-12 | 6 |
telencephalic nucleus | 8.16e-11 | 7 |
basal ganglion | 1.04e-08 | 9 |
neural nucleus | 1.04e-08 | 9 |
nuclear complex of neuraxis | 1.04e-08 | 9 |
nucleus of brain | 1.04e-08 | 9 |
aggregate regional part of brain | 1.04e-08 | 9 |
collection of basal ganglia | 1.04e-08 | 9 |
cerebral subcortex | 1.04e-08 | 9 |
peripheral nervous system | 1.12e-08 | 8 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.