FFCP PHASE1:Hg19::chr10:5227104..5227123,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=23469|TSSclassifier=N|UniProt=C9J5T8|association_with_transcript=-8bp_to_ENST00000488756_5end|coexpression_cluster_id=C5|description=CAGE_peak_1_at_AKR1CL1_5end|id=chr10:5227104..5227123,-|ontology_enrichment_celltype=CL:0000136!1.89e-13!15;CL:0000181!4.01e-08!12;CL:0000417!4.01e-08!12;CL:0000668!4.01e-08!12;CL:0000414!4.01e-08!12;CL:0000412!4.01e-08!12;CL:0000182!4.01e-08!12|ontology_enrichment_celltype_v019=CL:0000182;2.60e-17;12|ontology_enrichment_celltype_v019_2=CL:0000182,2.60e-17,12|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon_v019=UBERON:0002107;5.05e-19;19!UBERON:0006925;5.05e-19;19!UBERON:0002423;1.43e-14;25!UBERON:0002365;3.24e-12;31!UBERON:0002330;3.24e-12;31!UBERON:0002368;6.62e-10;33!UBERON:0000949;2.32e-08;43|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.05e-19,19;UBERON:0006925,5.05e-19,19;UBERON:0008836,5.05e-19,19;UBERON:0008835,1.70e-16,22;UBERON:0003894,1.70e-16,22;UBERON:0009854,8.45e-16,23;UBERON:0007499,1.43e-14,25;UBERON:0009497,1.43e-14,25;UBERON:0000015,1.43e-14,25;UBERON:0002423,1.43e-14,25;UBERON:0006235,1.43e-14,25;UBERON:0004161,1.43e-14,25;UBERON:0009856,4.98e-14,26;UBERON:0002365,7.79e-12,31;UBERON:0002330,7.79e-12,31;UBERON:0002368,1.58e-10,35;UBERON:0000949,2.88e-08,45;UBERON:0003929,6.11e-07,54;UBERON:0005172,6.11e-07,54;UBERON:0005173,6.11e-07,54|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0.522371256399677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,51.9695642769506,10.8110993834539,14.1789577603537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.1774388286924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.9458841398202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0.994147647766298,0,0,0,0.63337622438398,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0.223171457441873,0.201550417460179,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,4.83622371137672,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,1.08803560673895,0.5013797880454,0.306345576763462,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.743614585554013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3196288626764,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,1.07185652062471,0,0,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@AKR1CL1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23469 | |||
|TSSclassifier=N | |||
|UniProt=C9J5T8 | |||
|association_with_transcript=-8bp_to_ENST00000488756_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_AKR1CL1_5end | |||
|id=chr10:5227104..5227123,- | |||
|ontology_enrichment_celltype=CL:0000136!1.89e-13!15;CL:0000181!4.01e-08!12;CL:0000417!4.01e-08!12;CL:0000668!4.01e-08!12;CL:0000414!4.01e-08!12;CL:0000412!4.01e-08!12;CL:0000182!4.01e-08!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.60e-17;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.60e-17,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;5.05e-19;19!UBERON:0006925;5.05e-19;19!UBERON:0002423;1.43e-14;25!UBERON:0002365;3.24e-12;31!UBERON:0002330;3.24e-12;31!UBERON:0002368;6.62e-10;33!UBERON:0000949;2.32e-08;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.05e-19,19;UBERON:0006925,5.05e-19,19;UBERON:0008836,5.05e-19,19;UBERON:0008835,1.70e-16,22;UBERON:0003894,1.70e-16,22;UBERON:0009854,8.45e-16,23;UBERON:0007499,1.43e-14,25;UBERON:0009497,1.43e-14,25;UBERON:0000015,1.43e-14,25;UBERON:0002423,1.43e-14,25;UBERON:0006235,1.43e-14,25;UBERON:0004161,1.43e-14,25;UBERON:0009856,4.98e-14,26;UBERON:0002365,7.79e-12,31;UBERON:0002330,7.79e-12,31;UBERON:0002368,1.58e-10,35;UBERON:0000949,2.88e-08,45;UBERON:0003929,6.11e-07,54;UBERON:0005172,6.11e-07,54;UBERON:0005173,6.11e-07,54 | |||
|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0.522371256399677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,51.9695642769506,10.8110993834539,14.1789577603537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.1774388286924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.9458841398202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0.994147647766298,0,0,0,0.63337622438398,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0.223171457441873,0.201550417460179,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,4.83622371137672,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,1.08803560673895,0.5013797880454,0.306345576763462,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.743614585554013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3196288626764,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,1.07185652062471,0,0,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@AKR1CL1 | |||
}} |
Revision as of 13:37, 10 September 2013
Short description: | p1@AKR1CL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_AKR1CL1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -8bp_to_ENST00000488756_5end |
EntrezGene: | NA |
HGNC: | 23469 |
UniProt: | C9J5T8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.60e-17 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 5.05e-19 | 19 |
digestive gland | 5.05e-19 | 19 |
liver bud | 5.05e-19 | 19 |
hepatic diverticulum | 1.70e-16 | 22 |
liver primordium | 1.70e-16 | 22 |
digestive tract diverticulum | 8.45e-16 | 23 |
epithelial sac | 1.43e-14 | 25 |
epithelium of foregut-midgut junction | 1.43e-14 | 25 |
anatomical boundary | 1.43e-14 | 25 |
hepatobiliary system | 1.43e-14 | 25 |
foregut-midgut junction | 1.43e-14 | 25 |
septum transversum | 1.43e-14 | 25 |
sac | 4.98e-14 | 26 |
exocrine gland | 7.79e-12 | 31 |
exocrine system | 7.79e-12 | 31 |
endocrine gland | 1.58e-10 | 35 |
endocrine system | 2.88e-08 | 45 |
gut epithelium | 6.11e-07 | 54 |
abdomen element | 6.11e-07 | 54 |
abdominal segment element | 6.11e-07 | 54 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.