FFCP PHASE1:Hg19::chr1:236046799..236046806,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1130|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1968|TSSclassifier=S|UniProt=F5H074|association_with_transcript=65bp_to_ENST00000536965_5end|coexpression_cluster_id=C610|description=CAGE_peak_18_at_LYST_5end|id=chr1:236046799..236046806,-|ontology_enrichment_celltype=CL:0000148!1.67e-15!10;CL:0000541!1.67e-15!10;CL:0002567!4.91e-14!3;CL:0000147!7.27e-11!14;CL:0000453!3.85e-08!5;CL:0000710!2.20e-07!20|ontology_enrichment_celltype_v019=CL:0002567;2.27e-84;3!CL:0000148;2.55e-70;10!CL:0000147;1.97e-50;14!CL:0000710;1.71e-35;20!CL:0000075;1.95e-26;27!CL:0002077;8.52e-18;34|ontology_enrichment_celltype_v019_2=CL:0002567,3.03e-84,3;CL:0000148,2.37e-70,10;CL:0000541,2.37e-70,10;CL:0000147,1.87e-50,14;CL:0000710,1.65e-35,20;CL:0000075,1.89e-26,27;CL:0002077,4.16e-21,34;CL:0000333,8.77e-17,41;CL:0000133,6.07e-12,59;CL:0000221,6.69e-10,72|ontology_enrichment_development_v019=CL:0000133;5.70e-08;59|ontology_enrichment_disease=DOID:1909!7.79e-10!2|ontology_enrichment_disease_v019=DOID:1909;1.33e-15;2|ontology_enrichment_disease_v019_2=DOID:1909,1.33e-15,2|ontology_enrichment_uberon=UBERON:0001049!6.33e-16!57;UBERON:0005068!6.33e-16!57;UBERON:0006241!6.33e-16!57;UBERON:0007135!6.33e-16!57;UBERON:0002680!1.13e-15!9;UBERON:0001895!1.13e-15!9;UBERON:0010092!1.13e-15!9;UBERON:0005743!6.40e-15!86;UBERON:0001017!3.46e-14!82;UBERON:0007023!5.34e-14!115;UBERON:0000955!5.87e-14!69;UBERON:0006238!5.87e-14!69;UBERON:0002616!2.63e-13!59;UBERON:0000073!4.44e-13!94;UBERON:0001016!4.44e-13!94;UBERON:0000988!7.09e-13!3;UBERON:0006331!8.35e-13!3;UBERON:0003076!2.14e-12!15;UBERON:0003057!2.14e-12!15;UBERON:0003075!5.34e-12!86;UBERON:0007284!5.34e-12!86;UBERON:0004733!1.34e-11!12;UBERON:0002028!1.34e-11!12;UBERON:0007277!1.34e-11!12;UBERON:0002020!1.84e-11!34;UBERON:0003528!1.84e-11!34;UBERON:0002346!2.79e-11!90;UBERON:0004732!1.17e-10!13;UBERON:0000033!3.47e-10!123;UBERON:0004121!1.40e-09!169;UBERON:0000153!1.71e-09!129;UBERON:0007811!1.71e-09!129;UBERON:0000924!3.13e-09!173;UBERON:0006601!3.13e-09!173;UBERON:0002148!3.99e-09!2;UBERON:0009662!3.99e-09!2;UBERON:0002298!2.61e-08!8;UBERON:0001950!2.79e-08!20;UBERON:0002791!7.99e-08!33;UBERON:0002780!1.36e-07!41;UBERON:0001890!1.36e-07!41;UBERON:0006240!1.36e-07!41;UBERON:0001893!1.48e-07!34;UBERON:0002619!1.76e-07!22;UBERON:0003080!2.25e-07!42;UBERON:0002308!2.57e-07!9;UBERON:0000125!2.57e-07!9|ontology_enrichment_uberon_v019=UBERON:0002021;6.21e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0002021,6.39e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206651562351531,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0.761974731506028,2.67391897890794,1.17217447210047,1.71072446022705,4.01027221542962,0,1.71495859578347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.613612095012929,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0.104421949505455,0,0,0,0,0,0.242780379534093,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0.687944129886466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.33628058591625,0.570930667089935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0.138258436151731,0.389720617678777,0.132864840313363,0.817826971279221,0,0,0,0.39997479170986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41696576325585,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203909198930495,0.0657727735628491,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.0679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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1130 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1968 | |||
|TSSclassifier=S | |||
|UniProt=F5H074 | |||
|association_with_transcript=65bp_to_ENST00000536965_5end | |||
|coexpression_cluster_id=C610 | |||
|description=CAGE_peak_18_at_LYST_5end | |||
|id=chr1:236046799..236046806,- | |||
|ontology_enrichment_celltype=CL:0000148!1.67e-15!10;CL:0000541!1.67e-15!10;CL:0002567!4.91e-14!3;CL:0000147!7.27e-11!14;CL:0000453!3.85e-08!5;CL:0000710!2.20e-07!20 | |||
|ontology_enrichment_celltype_v019=CL:0002567;2.27e-84;3!CL:0000148;2.55e-70;10!CL:0000147;1.97e-50;14!CL:0000710;1.71e-35;20!CL:0000075;1.95e-26;27!CL:0002077;8.52e-18;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,3.03e-84,3;CL:0000148,2.37e-70,10;CL:0000541,2.37e-70,10;CL:0000147,1.87e-50,14;CL:0000710,1.65e-35,20;CL:0000075,1.89e-26,27;CL:0002077,4.16e-21,34;CL:0000333,8.77e-17,41;CL:0000133,6.07e-12,59;CL:0000221,6.69e-10,72 | |||
|ontology_enrichment_development_v019=CL:0000133;5.70e-08;59 | |||
|ontology_enrichment_disease=DOID:1909!7.79e-10!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;1.33e-15;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.33e-15,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!6.33e-16!57;UBERON:0005068!6.33e-16!57;UBERON:0006241!6.33e-16!57;UBERON:0007135!6.33e-16!57;UBERON:0002680!1.13e-15!9;UBERON:0001895!1.13e-15!9;UBERON:0010092!1.13e-15!9;UBERON:0005743!6.40e-15!86;UBERON:0001017!3.46e-14!82;UBERON:0007023!5.34e-14!115;UBERON:0000955!5.87e-14!69;UBERON:0006238!5.87e-14!69;UBERON:0002616!2.63e-13!59;UBERON:0000073!4.44e-13!94;UBERON:0001016!4.44e-13!94;UBERON:0000988!7.09e-13!3;UBERON:0006331!8.35e-13!3;UBERON:0003076!2.14e-12!15;UBERON:0003057!2.14e-12!15;UBERON:0003075!5.34e-12!86;UBERON:0007284!5.34e-12!86;UBERON:0004733!1.34e-11!12;UBERON:0002028!1.34e-11!12;UBERON:0007277!1.34e-11!12;UBERON:0002020!1.84e-11!34;UBERON:0003528!1.84e-11!34;UBERON:0002346!2.79e-11!90;UBERON:0004732!1.17e-10!13;UBERON:0000033!3.47e-10!123;UBERON:0004121!1.40e-09!169;UBERON:0000153!1.71e-09!129;UBERON:0007811!1.71e-09!129;UBERON:0000924!3.13e-09!173;UBERON:0006601!3.13e-09!173;UBERON:0002148!3.99e-09!2;UBERON:0009662!3.99e-09!2;UBERON:0002298!2.61e-08!8;UBERON:0001950!2.79e-08!20;UBERON:0002791!7.99e-08!33;UBERON:0002780!1.36e-07!41;UBERON:0001890!1.36e-07!41;UBERON:0006240!1.36e-07!41;UBERON:0001893!1.48e-07!34;UBERON:0002619!1.76e-07!22;UBERON:0003080!2.25e-07!42;UBERON:0002308!2.57e-07!9;UBERON:0000125!2.57e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002021;6.21e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,6.39e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206651562351531,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0.761974731506028,2.67391897890794,1.17217447210047,1.71072446022705,4.01027221542962,0,1.71495859578347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.613612095012929,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0.104421949505455,0,0,0,0,0,0.242780379534093,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0.687944129886466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.33628058591625,0.570930667089935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0.138258436151731,0.389720617678777,0.132864840313363,0.817826971279221,0,0,0,0.39997479170986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41696576325585,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203909198930495,0.0657727735628491,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0,0,0,0,0,0,0.0636471582781649,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p18@LYST | |||
}} |
Revision as of 04:23, 12 September 2013
Short description: | p18@LYST |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_18_at_LYST_5end |
Coexpression cluster: | C610_melanoma_Melanocyte_migratory_mycosis_cerebellum_epithelioid_retina |
Association with transcript: | 65bp_to_ENST00000536965_5end |
EntrezGene: | LYST |
HGNC: | 1968 |
UniProt: | F5H074 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 3.03e-84 | 3 |
melanocyte | 2.37e-70 | 10 |
melanoblast | 2.37e-70 | 10 |
pigment cell | 1.87e-50 | 14 |
neurecto-epithelial cell | 1.65e-35 | 20 |
columnar/cuboidal epithelial cell | 1.89e-26 | 27 |
ecto-epithelial cell | 4.16e-21 | 34 |
migratory neural crest cell | 8.77e-17 | 41 |
neurectodermal cell | 6.07e-12 | 59 |
ectodermal cell | 6.69e-10 | 72 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 6.39e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.33e-15 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.