FFCP PHASE1:Hg19::chr1:227127664..227127698,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1852|description=CAGE_peak_at_chr1:227127664..227127698,-|id=chr1:227127664..227127698,-|ontology_enrichment_celltype=CL:0000988!1.56e-21!182;CL:0000037!2.47e-21!172;CL:0000566!2.47e-21!172;CL:0000738!9.29e-21!140;CL:0002032!2.21e-19!165;CL:0000837!2.21e-19!165;CL:0000542!4.80e-17!53;CL:0000051!4.80e-17!53;CL:0000838!5.40e-17!52;CL:0002087!6.68e-16!119;CL:0002031!1.56e-14!124;CL:0000791!6.71e-12!18;CL:0000789!6.71e-12!18;CL:0002420!6.71e-12!18;CL:0002419!6.71e-12!18;CL:0000790!6.71e-12!18;CL:0000084!1.44e-10!25;CL:0000827!1.44e-10!25;CL:0000625!4.04e-08!11;CL:0000236!1.00e-07!14|ontology_enrichment_celltype_v019=CL:0000791;2.44e-24;18!CL:0000789;2.44e-24;18!CL:0002419;2.44e-24;18!CL:0000236;4.56e-20;13!CL:0000542;3.26e-19;53!CL:0000084;3.68e-18;25!CL:0000625;7.00e-16;11!CL:0000624;6.28e-12;6!CL:0000945;7.41e-11;24!CL:0002393;9.33e-10;6!CL:0002397;9.33e-10;6!CL:0000094;6.40e-09;8!CL:0002087;4.67e-08;104!CL:0000775;3.34e-07;3!CL:0000898;9.34e-07;3!CL:0000738;9.96e-07;136|ontology_enrichment_celltype_v019_2=CL:0000738,9.74e-34,136;CL:0000838,2.05e-31,52;CL:0000542,1.30e-30,53;CL:0000051,1.30e-30,53;CL:0000037,1.24e-29,168;CL:0000988,3.33e-28,177;CL:0002032,7.19e-26,161;CL:0000837,7.19e-26,161;CL:0002087,9.52e-26,115;CL:0002031,2.02e-25,120;CL:0000791,1.88e-24,18;CL:0000789,1.88e-24,18;CL:0002420,1.88e-24,18;CL:0002419,1.88e-24,18;CL:0000790,1.88e-24,18;CL:0000236,3.22e-18,14;CL:0000084,4.29e-18,25;CL:0000827,4.29e-18,25;CL:0000625,5.45e-16,11;CL:0000624,6.20e-12,6;CL:0002393,1.72e-11,9;CL:0002397,1.72e-11,9;CL:0000945,9.12e-11,24;CL:0000826,9.12e-11,24;CL:0000134,2.18e-09,354;CL:0002320,2.55e-09,361;CL:0000094,5.45e-09,8;CL:0000219,7.61e-08,386;CL:0000766,1.14e-07,72;CL:0000775,2.98e-07,3;CL:0000898,9.27e-07,3|ontology_enrichment_development_v019=CL:0000790;2.44e-24;18!CL:0000051;3.26e-19;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!3.32e-07!102;UBERON:0003061!3.32e-07!102;UBERON:0000178!4.24e-07!15;UBERON:0000179!4.24e-07!15;UBERON:0000463!4.24e-07!15|ontology_enrichment_uberon_v019=UBERON:0000178;3.15e-09;15!UBERON:0000179;3.15e-09;15!UBERON:0000463;3.15e-09;15|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.64e-09,15;UBERON:0000179,3.64e-09,15;UBERON:0000463,3.64e-09,15;UBERON:0002390,9.96e-09,98;UBERON:0003061,9.96e-09,98;UBERON:0002384,1.41e-08,371;UBERON:0002193,3.17e-07,108|phase1_expression=0,0.214100523890983,0.140954404095971,1.0007329835313,0,0,0,0,0.522371256399677,0.245733936501509,2.79120467188971,0,0.263766978228454,0.123766352960047,0,0.672325146451775,0,0,0,0.246242116153576,0.816002764977012,1.25381888591235,0,0.136874425072884,0,0.764134057479513,0.492603536699674,0.157421562627358,2.75354993794233,0.767658796194425,0.928896739896456,0,0.6024118375565,0,0.154934401160603,0.426507697462265,3.22960483268332,1.66198622559563,1.60435557976113,3.03815219002193,0.447830948479849,0.32389366601898,1.03030227053675,0.872389432677388,0.377875943688809,1.21292030593908,0.464858073811369,0,0.619412741790207,0,0,0.236482229888585,0.344745680736619,0,0,0.752969358170419,0,0.224723484445085,0.612167784741805,0,0,0.329851300186716,0.598390972864896,0,0,0,0.622822248995575,0,0,0,0.605399502633369,0,0,2.11255286311942,1.4882300997553,1.88692780957538,3.93150209012733,4.05477610672067,1.76798145366788,2.85012743741249,0.79566670879636,2.00930569141097,3.51992488922645,2.73069305631066,5.33705552318133,5.9742231159311,4.00395987036012,3.4485146397269,3.30522436392431,6.67837628174755,3.98449078376614,4.11066032559657,4.20500550937752,0,1.12101712596307,2.10707267820062,2.75393678159366,5.10913991573914,4.11202997999018,2.67498392625085,7.17028986593899,7.101717086021,1.94826728407911,1.33692548262208,2.3568472597987,1.77227115666897,2.16643091012012,1.5370958367081,1.1705341280389,0.986627427622057,1.65810010671509,1.73881851441031,2.96573126324121,3.21048993707656,5.22677619024884,0.339928028092699,3.83220493601921,2.40539211837841,1.51811815211702,3.50421955756506,3.25541726928209,5.70271226669025,2.86092726247768,1.27986611154418,3.74792179657038,1.65744076430812,0.821127996921047,4.23374160771938,4.81392352410313,3.33096128930438,0,0.670700859703636,0,0,0.50133791063589,0.144846518960824,0,0,0.378139268656271,0.221729397462564,0.175669571386252,0.196468613246569,0,0,0,0.522389211897802,0.531831842075461,0.476981248610684,1.71598473234038,1.11437250398869,0.79504962946682,0,0.347140501607594,0.56530794192401,0.419499436209906,0.275118041940067,0.417989933073621,0,0,0.33472061276467,0,0.760272105718513,0.24406205754817,0,0,0.0892997282840798,0.22452937262617,0.225222960966644,1.53316637465883,1.89853131913626,0,5.27121669744253,3.87780264148325,0,0,0.12663051166458,0.132409180813219,0.573673241497627,0.354668382198357,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1852 | |||
|description=CAGE_peak_at_chr1:227127664..227127698,- | |||
|id=chr1:227127664..227127698,- | |||
|ontology_enrichment_celltype=CL:0000988!1.56e-21!182;CL:0000037!2.47e-21!172;CL:0000566!2.47e-21!172;CL:0000738!9.29e-21!140;CL:0002032!2.21e-19!165;CL:0000837!2.21e-19!165;CL:0000542!4.80e-17!53;CL:0000051!4.80e-17!53;CL:0000838!5.40e-17!52;CL:0002087!6.68e-16!119;CL:0002031!1.56e-14!124;CL:0000791!6.71e-12!18;CL:0000789!6.71e-12!18;CL:0002420!6.71e-12!18;CL:0002419!6.71e-12!18;CL:0000790!6.71e-12!18;CL:0000084!1.44e-10!25;CL:0000827!1.44e-10!25;CL:0000625!4.04e-08!11;CL:0000236!1.00e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.44e-24;18!CL:0000789;2.44e-24;18!CL:0002419;2.44e-24;18!CL:0000236;4.56e-20;13!CL:0000542;3.26e-19;53!CL:0000084;3.68e-18;25!CL:0000625;7.00e-16;11!CL:0000624;6.28e-12;6!CL:0000945;7.41e-11;24!CL:0002393;9.33e-10;6!CL:0002397;9.33e-10;6!CL:0000094;6.40e-09;8!CL:0002087;4.67e-08;104!CL:0000775;3.34e-07;3!CL:0000898;9.34e-07;3!CL:0000738;9.96e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,9.74e-34,136;CL:0000838,2.05e-31,52;CL:0000542,1.30e-30,53;CL:0000051,1.30e-30,53;CL:0000037,1.24e-29,168;CL:0000988,3.33e-28,177;CL:0002032,7.19e-26,161;CL:0000837,7.19e-26,161;CL:0002087,9.52e-26,115;CL:0002031,2.02e-25,120;CL:0000791,1.88e-24,18;CL:0000789,1.88e-24,18;CL:0002420,1.88e-24,18;CL:0002419,1.88e-24,18;CL:0000790,1.88e-24,18;CL:0000236,3.22e-18,14;CL:0000084,4.29e-18,25;CL:0000827,4.29e-18,25;CL:0000625,5.45e-16,11;CL:0000624,6.20e-12,6;CL:0002393,1.72e-11,9;CL:0002397,1.72e-11,9;CL:0000945,9.12e-11,24;CL:0000826,9.12e-11,24;CL:0000134,2.18e-09,354;CL:0002320,2.55e-09,361;CL:0000094,5.45e-09,8;CL:0000219,7.61e-08,386;CL:0000766,1.14e-07,72;CL:0000775,2.98e-07,3;CL:0000898,9.27e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;2.44e-24;18!CL:0000051;3.26e-19;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.32e-07!102;UBERON:0003061!3.32e-07!102;UBERON:0000178!4.24e-07!15;UBERON:0000179!4.24e-07!15;UBERON:0000463!4.24e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.15e-09;15!UBERON:0000179;3.15e-09;15!UBERON:0000463;3.15e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.64e-09,15;UBERON:0000179,3.64e-09,15;UBERON:0000463,3.64e-09,15;UBERON:0002390,9.96e-09,98;UBERON:0003061,9.96e-09,98;UBERON:0002384,1.41e-08,371;UBERON:0002193,3.17e-07,108 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,1.0007329835313,0,0,0,0,0.522371256399677,0.245733936501509,2.79120467188971,0,0.263766978228454,0.123766352960047,0,0.672325146451775,0,0,0,0.246242116153576,0.816002764977012,1.25381888591235,0,0.136874425072884,0,0.764134057479513,0.492603536699674,0.157421562627358,2.75354993794233,0.767658796194425,0.928896739896456,0,0.6024118375565,0,0.154934401160603,0.426507697462265,3.22960483268332,1.66198622559563,1.60435557976113,3.03815219002193,0.447830948479849,0.32389366601898,1.03030227053675,0.872389432677388,0.377875943688809,1.21292030593908,0.464858073811369,0,0.619412741790207,0,0,0.236482229888585,0.344745680736619,0,0,0.752969358170419,0,0.224723484445085,0.612167784741805,0,0,0.329851300186716,0.598390972864896,0,0,0,0.622822248995575,0,0,0,0.605399502633369,0,0,2.11255286311942,1.4882300997553,1.88692780957538,3.93150209012733,4.05477610672067,1.76798145366788,2.85012743741249,0.79566670879636,2.00930569141097,3.51992488922645,2.73069305631066,5.33705552318133,5.9742231159311,4.00395987036012,3.4485146397269,3.30522436392431,6.67837628174755,3.98449078376614,4.11066032559657,4.20500550937752,0,1.12101712596307,2.10707267820062,2.75393678159366,5.10913991573914,4.11202997999018,2.67498392625085,7.17028986593899,7.101717086021,1.94826728407911,1.33692548262208,2.3568472597987,1.77227115666897,2.16643091012012,1.5370958367081,1.1705341280389,0.986627427622057,1.65810010671509,1.73881851441031,2.96573126324121,3.21048993707656,5.22677619024884,0.339928028092699,3.83220493601921,2.40539211837841,1.51811815211702,3.50421955756506,3.25541726928209,5.70271226669025,2.86092726247768,1.27986611154418,3.74792179657038,1.65744076430812,0.821127996921047,4.23374160771938,4.81392352410313,3.33096128930438,0,0.670700859703636,0,0,0.50133791063589,0.144846518960824,0,0,0.378139268656271,0.221729397462564,0.175669571386252,0.196468613246569,0,0,0,0.522389211897802,0.531831842075461,0.476981248610684,1.71598473234038,1.11437250398869,0.79504962946682,0,0.347140501607594,0.56530794192401,0.419499436209906,0.275118041940067,0.417989933073621,0,0,0.33472061276467,0,0.760272105718513,0.24406205754817,0,0,0.0892997282840798,0.22452937262617,0.225222960966644,1.53316637465883,1.89853131913626,0,5.27121669744253,3.87780264148325,0,0,0.12663051166458,0.132409180813219,0.573673241497627,0.354668382198357,1.12135520028461,2.1349799145941,0.24666754841716,0,0,0.163461903113459,0.454072282934794,0,0.468642863667593,0,0,0.149448680551801,0.117434498643765,0,0.140450806702248,0,0.245668634623536,0.103325781175765,0,0.247266929278557,0,0,0,0.375355559615893,0,0,0.30648779579902,0.300476117813194,0.113432183160021,0.358779271377724,0,0,0.300091096084402,0.206105058476878,0.257640540045629,0,0.337552664482532,0.0974370051611986,0,0.368199594569197,0.161646056818812,0,0,0.169560592310488,0,0,0.286804595389004,0.609868530647977,0.132529768321485,0.232387885739037,0.518305275076852,0.252320850875628,0.72995471815166,1.56449532329816,0,2.76269842704961,0,0,0.591534000199219,0.505754070234305,0.964044119533928,0.441175890929576,0.435758888184812,0.949082476444386,0.674156540800822,0.196221465125346,0.38474715694639,0,0,0.4115740113314,0,0,0,0,0,0.245976877086227,0,0.109750285408626,0,0.100528972411631,0,0.325808305310325,0,0,0.115930404975077,0,0.577465791044295,0,0,3.95102198979638,0.858486162094873,0.246217006087397,0.234004265139238,0,0,0,0,0,0,0.766765358330422,0,0.44024217006613,1.4512968087854,1.72943944100354,2.27236380167484,0.063497894292169,0,1.17217447210047,0,0,0.300343057843917,0,0.224262168690721,0,0.1466765716419,0,0,0,0.26593811658487,1.04007436911366,0.257207374262142,0,0,0.142977993658148,0,1.64648067356154,0,0.355391948742546,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0.336255431980582,2.56139988262505,2.80315847317372,3.7219480521127,0.508189248444927,0,0,0.335032530668698,0.637938751653163,8.98808428736619,5.9832291840805,4.97298616123243,0,0,0,0.207970861530807,0,0,0.117141414992713,0,0,0,0,1.10621501125022,0.0868836144680828,1.17480694477644,0.686286847621712,1.86091223510599,1.07857100409308,0.640365346820666,0.303127571446259,1.66435439510497,0,0.248107807818777,0.153461973288062,0.280660094433074,0.128139149255701,0,0,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0,0.362578348774867,0.200506470303285,0.0920809889358963,0.114814448164607,0.182091168006717,0.131124414959424,0,0.0770153371044148,0.784349769176855,0,0.105551628892876,0,0.340187410553031,0,0,0.541892875087706,0,0,0.831076008928724,0.223874754722178,0,0,0,0.328014645699706,0,0.309123034943167,0.27470839445503,0.41254749960294,0,0,0,0.193341436584244,0,0.307007349452259,0.413509717453592,0.214840489736547,0.725083469571143,0.511359764496605,0,0.165284915360978,0,0,0.10115778085555,0,0,1.3940745403212,0.308033580176089,0,0.869932992075073,0.37064843820784,0,0,0,0,0,0,0.95460974377781,0,0.359744915166629,0.54907405947211,0.589062011728432,0.404364963146632,1.58510321173008,0,0.97526747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| |||
|short_description=p@chr1:227127664..227127698,- | |||
}} |
Revision as of 04:00, 12 September 2013
Short description: | p@chr1:227127664..227127698, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:227127664..227127698, - |
Coexpression cluster: | C1852_Neutrophils_CD19_CD4_Peripheral_Eosinophils_Natural_CD8 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 9.74e-34 | 136 |
lymphoid lineage restricted progenitor cell | 2.05e-31 | 52 |
lymphocyte | 1.30e-30 | 53 |
common lymphoid progenitor | 1.30e-30 | 53 |
hematopoietic stem cell | 1.24e-29 | 168 |
hematopoietic cell | 3.33e-28 | 177 |
hematopoietic oligopotent progenitor cell | 7.19e-26 | 161 |
hematopoietic multipotent progenitor cell | 7.19e-26 | 161 |
nongranular leukocyte | 9.52e-26 | 115 |
hematopoietic lineage restricted progenitor cell | 2.02e-25 | 120 |
mature alpha-beta T cell | 1.88e-24 | 18 |
alpha-beta T cell | 1.88e-24 | 18 |
immature T cell | 1.88e-24 | 18 |
mature T cell | 1.88e-24 | 18 |
immature alpha-beta T cell | 1.88e-24 | 18 |
B cell | 3.22e-18 | 14 |
T cell | 4.29e-18 | 25 |
pro-T cell | 4.29e-18 | 25 |
CD8-positive, alpha-beta T cell | 5.45e-16 | 11 |
CD4-positive, alpha-beta T cell | 6.20e-12 | 6 |
intermediate monocyte | 1.72e-11 | 9 |
CD14-positive, CD16-positive monocyte | 1.72e-11 | 9 |
lymphocyte of B lineage | 9.12e-11 | 24 |
pro-B cell | 9.12e-11 | 24 |
mesenchymal cell | 2.18e-09 | 354 |
connective tissue cell | 2.55e-09 | 361 |
granulocyte | 5.45e-09 | 8 |
motile cell | 7.61e-08 | 386 |
myeloid leukocyte | 1.14e-07 | 72 |
neutrophil | 2.98e-07 | 3 |
naive T cell | 9.27e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 3.64e-09 | 15 |
haemolymphatic fluid | 3.64e-09 | 15 |
organism substance | 3.64e-09 | 15 |
hematopoietic system | 9.96e-09 | 98 |
blood island | 9.96e-09 | 98 |
connective tissue | 1.41e-08 | 371 |
hemolymphoid system | 3.17e-07 | 108 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.