FFCP PHASE1:Hg19::chr1:211307333..211307357,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3756|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6250|TSSclassifier=S|UniProt=O95259|association_with_transcript=-18bp_to_ENST00000271751_5end|coexpression_cluster_id=C3936|description=CAGE_peak_3_at_KCNH1_5end|id=chr1:211307333..211307357,-|ontology_enrichment_celltype=CL:0000333!1.17e-11!41;CL:0000095!1.19e-09!17;CL:0000123!1.19e-09!17;CL:0000243!1.86e-09!15;CL:0000125!1.86e-09!15;CL:0000030!1.86e-09!15;CL:0000339!1.86e-09!15;CL:0000133!5.24e-07!59|ontology_enrichment_celltype_v019=CL:0000333;5.05e-09;5!CL:0000148;5.00e-07;10|ontology_enrichment_celltype_v019_2=CL:0000148,5.84e-07,10;CL:0000541,5.84e-07,10|ontology_enrichment_development_v019=UBERON:0006215;5.21e-15;3!UBERON:0006601;4.20e-11;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:169;1.39e-07;6|ontology_enrichment_disease_v019_2=DOID:169,1.29e-07,6|ontology_enrichment_uberon=UBERON:0000073!9.09e-40!94;UBERON:0001016!9.09e-40!94;UBERON:0000955!3.89e-39!69;UBERON:0006238!3.89e-39!69;UBERON:0001049!2.01e-36!57;UBERON:0005068!2.01e-36!57;UBERON:0006241!2.01e-36!57;UBERON:0007135!2.01e-36!57;UBERON:0001017!2.70e-36!82;UBERON:0005743!3.21e-35!86;UBERON:0002616!5.56e-33!59;UBERON:0001893!2.20e-27!34;UBERON:0002020!5.24e-27!34;UBERON:0003528!5.24e-27!34;UBERON:0002780!1.16e-26!41;UBERON:0001890!1.16e-26!41;UBERON:0006240!1.16e-26!41;UBERON:0003075!3.12e-26!86;UBERON:0007284!3.12e-26!86;UBERON:0002791!5.43e-26!33;UBERON:0003080!8.67e-26!42;UBERON:0001869!4.60e-25!32;UBERON:0002346!2.26e-24!90;UBERON:0000033!1.65e-21!123;UBERON:0000956!1.67e-21!25;UBERON:0000203!1.67e-21!25;UBERON:0004121!1.76e-21!169;UBERON:0000153!1.32e-20!129;UBERON:0007811!1.32e-20!129;UBERON:0000924!1.63e-20!173;UBERON:0006601!1.63e-20!173;UBERON:0003056!3.21e-19!61;UBERON:0002619!6.05e-19!22;UBERON:0001950!1.02e-16!20;UBERON:0007023!1.67e-16!115;UBERON:0004732!3.64e-12!13;UBERON:0003076!1.20e-11!15;UBERON:0003057!1.20e-11!15;UBERON:0004733!9.27e-11!12;UBERON:0002028!9.27e-11!12;UBERON:0007277!9.27e-11!12;UBERON:0000200!5.75e-10!6;UBERON:0002680!1.13e-09!9;UBERON:0001895!1.13e-09!9;UBERON:0010092!1.13e-09!9;UBERON:0001872!1.99e-08!5;UBERON:0000475!4.26e-08!365;UBERON:0000064!1.30e-07!219;UBERON:0002308!5.51e-07!9;UBERON:0000125!5.51e-07!9|ontology_enrichment_uberon_v019=UBERON:0001950;2.82e-44;20!UBERON:0002619;4.01e-40;22!UBERON:0000956;4.33e-35;25!UBERON:0000203;4.33e-35;25!UBERON:0001893;1.98e-33;34!UBERON:0001869;6.92e-31;32!UBERON:0002791;1.07e-26;32!UBERON:0000200;4.57e-26;6!UBERON:0003528;3.76e-25;34!UBERON:0002020;3.76e-25;34!UBERON:0002780;4.86e-20;41!UBERON:0001890;4.86e-20;41!UBERON:0000073;1.39e-19;53!UBERON:0002616;1.39e-19;53!UBERON:0001872;9.41e-15;5!UBERON:0002021;1.32e-14;5!UBERON:0001870;9.30e-14;3!UBERON:0000955;2.19e-13;68!UBERON:0001017;8.01e-13;75!UBERON:0001016;2.49e-12;83!UBERON:0005162;5.02e-10;2!UBERON:0000122;5.02e-10;2!UBERON:0002771;1.00e-09;2!UBERON:0002702;2.06e-09;2!UBERON:0000013;5.05e-09;5!UBERON:0002410;5.05e-09;5!UBERON:0004732;9.15e-09;13!UBERON:0000010;1.46e-08;8!UBERON:0002037;1.04e-07;6!UBERON:0007023;9.26e-07;114|ontology_enrichment_uberon_v019_2=UBERON:0001950,2.11e-44,20;UBERON:0002619,3.09e-40,22;UBERON:0001893,5.01e-37,34;UBERON:0000956,3.44e-35,25;UBERON:0000203,3.44e-35,25;UBERON:0001869,4.17e-35,32;UBERON:0000073,7.33e-35,53;UBERON:0002616,7.33e-35,53;UBERON:0001049,9.59e-33,56;UBERON:0005068,9.59e-33,56;UBERON:0006241,9.59e-33,56;UBERON:0007135,9.59e-33,56;UBERON:0001016,9.89e-32,89;UBERON:0000955,6.57e-31,68;UBERON:0006238,6.57e-31,68;UBERON:0002791,8.61e-31,32;UBERON:0002780,3.92e-30,41;UBERON:0001890,3.92e-30,41;UBERON:0003080,3.92e-30,41;UBERON:0006240,3.92e-30,41;UBERON:0003528,8.13e-29,34;UBERON:0002020,8.13e-29,34;UBERON:0000200,3.77e-26,6;UBERON:0001017,3.65e-25,81;UBERON:0003075,4.19e-23,82;UBERON:0007284,4.19e-23,82;UBERON:0002346,8.68e-22,86;UBERON:0003056,1.59e-21,61;UBERON:0010371,1.35e-20,104;UBERON:0004121,1.40e-17,171;UBERON:0000924,1.40e-17,171;UBERON:0006601,1.40e-17,171;UBERON:0007023,2.40e-15,114;UBERON:0001872,7.24e-15,5;UBERON:0002021,1.69e-14,5;UBERON:0001870,9.13e-14,3;UBERON:0010314,1.17e-13,132;UBERON:0005162,3.06e-10,2;UBERON:0000122,3.06e-10,2;UBERON:0011216,5.80e-10,223;UBERON:0002771,8.60e-10,2;UBERON:0002702,2.16e-09,2;UBERON:0000013,4.61e-09,5;UBERON:0002410,4.61e-09,5;UBERON:0004732,1.09e-08,13;UBERON:0000010,1.35e-08,8;UBERON:0002037,1.11e-07,6;UBERON:0006215,1.11e-07,6;UBERON:0000025,6.24e-07,192|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0.286235987131057,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.434539556882471,1.5905718941022,0,0,0,0.175669571386252,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3756 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6250 | |||
|TSSclassifier=S | |||
|UniProt=O95259 | |||
|association_with_transcript=-18bp_to_ENST00000271751_5end | |||
|coexpression_cluster_id=C3936 | |||
|description=CAGE_peak_3_at_KCNH1_5end | |||
|id=chr1:211307333..211307357,- | |||
|ontology_enrichment_celltype=CL:0000333!1.17e-11!41;CL:0000095!1.19e-09!17;CL:0000123!1.19e-09!17;CL:0000243!1.86e-09!15;CL:0000125!1.86e-09!15;CL:0000030!1.86e-09!15;CL:0000339!1.86e-09!15;CL:0000133!5.24e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000333;5.05e-09;5!CL:0000148;5.00e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,5.84e-07,10;CL:0000541,5.84e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0006215;5.21e-15;3!UBERON:0006601;4.20e-11;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:169;1.39e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:169,1.29e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0000073!9.09e-40!94;UBERON:0001016!9.09e-40!94;UBERON:0000955!3.89e-39!69;UBERON:0006238!3.89e-39!69;UBERON:0001049!2.01e-36!57;UBERON:0005068!2.01e-36!57;UBERON:0006241!2.01e-36!57;UBERON:0007135!2.01e-36!57;UBERON:0001017!2.70e-36!82;UBERON:0005743!3.21e-35!86;UBERON:0002616!5.56e-33!59;UBERON:0001893!2.20e-27!34;UBERON:0002020!5.24e-27!34;UBERON:0003528!5.24e-27!34;UBERON:0002780!1.16e-26!41;UBERON:0001890!1.16e-26!41;UBERON:0006240!1.16e-26!41;UBERON:0003075!3.12e-26!86;UBERON:0007284!3.12e-26!86;UBERON:0002791!5.43e-26!33;UBERON:0003080!8.67e-26!42;UBERON:0001869!4.60e-25!32;UBERON:0002346!2.26e-24!90;UBERON:0000033!1.65e-21!123;UBERON:0000956!1.67e-21!25;UBERON:0000203!1.67e-21!25;UBERON:0004121!1.76e-21!169;UBERON:0000153!1.32e-20!129;UBERON:0007811!1.32e-20!129;UBERON:0000924!1.63e-20!173;UBERON:0006601!1.63e-20!173;UBERON:0003056!3.21e-19!61;UBERON:0002619!6.05e-19!22;UBERON:0001950!1.02e-16!20;UBERON:0007023!1.67e-16!115;UBERON:0004732!3.64e-12!13;UBERON:0003076!1.20e-11!15;UBERON:0003057!1.20e-11!15;UBERON:0004733!9.27e-11!12;UBERON:0002028!9.27e-11!12;UBERON:0007277!9.27e-11!12;UBERON:0000200!5.75e-10!6;UBERON:0002680!1.13e-09!9;UBERON:0001895!1.13e-09!9;UBERON:0010092!1.13e-09!9;UBERON:0001872!1.99e-08!5;UBERON:0000475!4.26e-08!365;UBERON:0000064!1.30e-07!219;UBERON:0002308!5.51e-07!9;UBERON:0000125!5.51e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;2.82e-44;20!UBERON:0002619;4.01e-40;22!UBERON:0000956;4.33e-35;25!UBERON:0000203;4.33e-35;25!UBERON:0001893;1.98e-33;34!UBERON:0001869;6.92e-31;32!UBERON:0002791;1.07e-26;32!UBERON:0000200;4.57e-26;6!UBERON:0003528;3.76e-25;34!UBERON:0002020;3.76e-25;34!UBERON:0002780;4.86e-20;41!UBERON:0001890;4.86e-20;41!UBERON:0000073;1.39e-19;53!UBERON:0002616;1.39e-19;53!UBERON:0001872;9.41e-15;5!UBERON:0002021;1.32e-14;5!UBERON:0001870;9.30e-14;3!UBERON:0000955;2.19e-13;68!UBERON:0001017;8.01e-13;75!UBERON:0001016;2.49e-12;83!UBERON:0005162;5.02e-10;2!UBERON:0000122;5.02e-10;2!UBERON:0002771;1.00e-09;2!UBERON:0002702;2.06e-09;2!UBERON:0000013;5.05e-09;5!UBERON:0002410;5.05e-09;5!UBERON:0004732;9.15e-09;13!UBERON:0000010;1.46e-08;8!UBERON:0002037;1.04e-07;6!UBERON:0007023;9.26e-07;114 | |||
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|short_description=p3@KCNH1 | |||
}} |
Revision as of 03:28, 12 September 2013
Short description: | p3@KCNH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_KCNH1_5end |
Coexpression cluster: | C3936_anaplastic_nonsmall_occipital_postcentral_paracentral_frontal_insula |
Association with transcript: | -18bp_to_ENST00000271751_5end |
EntrezGene: | KCNH1 |
HGNC: | 6250 |
UniProt: | O95259 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 5.84e-07 | 10 |
melanoblast | 5.84e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 1.29e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.